BLASTX nr result

ID: Dioscorea21_contig00018654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018654
         (904 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623723.1| Pentatricopeptide repeat-containing protein ...   244   3e-62
ref|XP_003552343.1| PREDICTED: pentatricopeptide repeat-containi...   238   2e-60
emb|CBI38862.3| unnamed protein product [Vitis vinifera]              236   5e-60
ref|XP_002273719.1| PREDICTED: pentatricopeptide repeat-containi...   236   5e-60
gb|AFK47264.1| unknown [Lotus japonicus]                              235   9e-60

>ref|XP_003623723.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355498738|gb|AES79941.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 426

 Score =  244 bits (622), Expect = 3e-62
 Identities = 118/187 (63%), Positives = 151/187 (80%)
 Frame = +1

Query: 4   LTVLVHMYSKAGYLNKAEEVFEEIKLLGLPVDKRSFGAMVMAYVRAGMLDLAENLLRESE 183
           LT +VHMYSKAG+L++AEE FEEIKLLG P+DKRS+G+M+MAY+RAGM +  E+LL E +
Sbjct: 219 LTTMVHMYSKAGHLDRAEEYFEEIKLLGEPLDKRSYGSMIMAYIRAGMPEKGESLLEEMD 278

Query: 184 AQEIYVGREVYKALLRAYAKLGNTDGAQRMFNAIQLARIVPDCWFCALLITAYCQAGQSD 363
           AQ+IY G EVYKALLRAY+ +GN +GAQR+F+AIQLA I+PD   C+LLI AY  AGQS 
Sbjct: 279 AQDIYAGSEVYKALLRAYSVIGNAEGAQRVFDAIQLAGIIPDDKMCSLLIYAYSMAGQSQ 338

Query: 364 KARSVLENMRTVGLDINDKCVALLLSAYEKENKLEKALSLLVDLEQDGIMVAEESSQVLA 543
           KAR   ENM+  G++  DKC++ +L AYEKEN L  AL  L++LE+DGIMV EE+S++LA
Sbjct: 339 KARIAFENMKRAGIEPTDKCISSVLVAYEKENMLNTALEFLIELERDGIMVKEETSRILA 398

Query: 544 SWFRRLG 564
            WFR+LG
Sbjct: 399 GWFRKLG 405


>ref|XP_003552343.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g01970-like [Glycine max]
          Length = 414

 Score =  238 bits (606), Expect = 2e-60
 Identities = 118/187 (63%), Positives = 147/187 (78%)
 Frame = +1

Query: 4   LTVLVHMYSKAGYLNKAEEVFEEIKLLGLPVDKRSFGAMVMAYVRAGMLDLAENLLRESE 183
           LT +VHMYSKAG  ++A+E FEEIKLLG P+DKRS+G+M+MAY+RAGM +  ENLL+E E
Sbjct: 209 LTTMVHMYSKAGNHDRAKEYFEEIKLLGKPLDKRSYGSMIMAYIRAGMPEEGENLLQEME 268

Query: 184 AQEIYVGREVYKALLRAYAKLGNTDGAQRMFNAIQLARIVPDCWFCALLITAYCQAGQSD 363
           AQEI  G EVYKALLRAY+ +GN +GAQR+F+AIQLA I PD   C+L++ AY  AGQS 
Sbjct: 269 AQEILAGSEVYKALLRAYSMIGNAEGAQRVFDAIQLAGITPDDKICSLVVNAYVMAGQSQ 328

Query: 364 KARSVLENMRTVGLDINDKCVALLLSAYEKENKLEKALSLLVDLEQDGIMVAEESSQVLA 543
           KA    ENMR  G+  +DKC+A +L AYEKE+K+  AL  L+DLE+DGIMV EE+S VLA
Sbjct: 329 KALIAFENMRRAGIKPSDKCIASVLVAYEKESKINTALEFLIDLERDGIMVEEEASAVLA 388

Query: 544 SWFRRLG 564
            WFR+LG
Sbjct: 389 KWFRKLG 395


>emb|CBI38862.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score =  236 bits (602), Expect = 5e-60
 Identities = 118/188 (62%), Positives = 149/188 (79%)
 Frame = +1

Query: 1   TLTVLVHMYSKAGYLNKAEEVFEEIKLLGLPVDKRSFGAMVMAYVRAGMLDLAENLLRES 180
           TLT +++MYSKAG L  AE+ FEEIKLLG P+DKRS+G+M+MAY+RAGM D  E L++E 
Sbjct: 141 TLTAMINMYSKAGNLELAEKTFEEIKLLGHPLDKRSYGSMIMAYIRAGMPDQGEILVKEM 200

Query: 181 EAQEIYVGREVYKALLRAYAKLGNTDGAQRMFNAIQLARIVPDCWFCALLITAYCQAGQS 360
           EA+EIY GREVYKALLRAY+   + +GAQR+F+AIQ A I PD   CALLI AY  AGQ+
Sbjct: 201 EAKEIYAGREVYKALLRAYSNTSDAEGAQRVFDAIQFAGISPDVKLCALLINAYRVAGQT 260

Query: 361 DKARSVLENMRTVGLDINDKCVALLLSAYEKENKLEKALSLLVDLEQDGIMVAEESSQVL 540
            KA    ENMR  GL  NDK +AL+L+AYEKENKL KAL  L+DLE+DGI++ +E+S++L
Sbjct: 261 QKAHVAFENMRRSGLKPNDKSIALMLAAYEKENKLNKALDFLIDLERDGIVLGKEASELL 320

Query: 541 ASWFRRLG 564
           A+WF+RLG
Sbjct: 321 AAWFQRLG 328


>ref|XP_002273719.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g01970-like [Vitis vinifera]
          Length = 352

 Score =  236 bits (602), Expect = 5e-60
 Identities = 118/188 (62%), Positives = 149/188 (79%)
 Frame = +1

Query: 1   TLTVLVHMYSKAGYLNKAEEVFEEIKLLGLPVDKRSFGAMVMAYVRAGMLDLAENLLRES 180
           TLT +++MYSKAG L  AE+ FEEIKLLG P+DKRS+G+M+MAY+RAGM D  E L++E 
Sbjct: 141 TLTAMINMYSKAGNLELAEKTFEEIKLLGHPLDKRSYGSMIMAYIRAGMPDQGEILVKEM 200

Query: 181 EAQEIYVGREVYKALLRAYAKLGNTDGAQRMFNAIQLARIVPDCWFCALLITAYCQAGQS 360
           EA+EIY GREVYKALLRAY+   + +GAQR+F+AIQ A I PD   CALLI AY  AGQ+
Sbjct: 201 EAKEIYAGREVYKALLRAYSNTSDAEGAQRVFDAIQFAGISPDVKLCALLINAYRVAGQT 260

Query: 361 DKARSVLENMRTVGLDINDKCVALLLSAYEKENKLEKALSLLVDLEQDGIMVAEESSQVL 540
            KA    ENMR  GL  NDK +AL+L+AYEKENKL KAL  L+DLE+DGI++ +E+S++L
Sbjct: 261 QKAHVAFENMRRSGLKPNDKSIALMLAAYEKENKLNKALDFLIDLERDGIVLGKEASELL 320

Query: 541 ASWFRRLG 564
           A+WF+RLG
Sbjct: 321 AAWFQRLG 328


>gb|AFK47264.1| unknown [Lotus japonicus]
          Length = 414

 Score =  235 bits (600), Expect = 9e-60
 Identities = 112/187 (59%), Positives = 149/187 (79%)
 Frame = +1

Query: 4   LTVLVHMYSKAGYLNKAEEVFEEIKLLGLPVDKRSFGAMVMAYVRAGMLDLAENLLRESE 183
           LT +VH+YSKAG+L++AEE FEEI+LLG P+DKRS+G+M+ AY+RAGM +  E+LL E +
Sbjct: 209 LTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMD 268

Query: 184 AQEIYVGREVYKALLRAYAKLGNTDGAQRMFNAIQLARIVPDCWFCALLITAYCQAGQSD 363
           A+EIY G EVYKALLRAY+++GN +GAQR+F+AIQLA I+PD   C L+  AY  AGQS+
Sbjct: 269 AREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVTKAYGMAGQSE 328

Query: 364 KARSVLENMRTVGLDINDKCVALLLSAYEKENKLEKALSLLVDLEQDGIMVAEESSQVLA 543
           KAR   ENM+  G++  D+C+  +L AYEKE+KL  AL  L+DLE++GIMV EE+S +LA
Sbjct: 329 KARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAILA 388

Query: 544 SWFRRLG 564
            WFR+LG
Sbjct: 389 GWFRKLG 395


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