BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018647
         (1740 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-lik...   431   e-118
gb|EAZ01977.1| hypothetical protein OsI_24011 [Oryza sativa Indi...   429   e-117
ref|XP_002331405.1| predicted protein [Populus trichocarpa] gi|2...   426   e-117
dbj|BAD45865.1| pseudouridylate synthase-like [Oryza sativa Japo...   423   e-116
ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus ...   422   e-115

>ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-like [Vitis vinifera]
          Length = 433

 Score =  431 bits (1108), Expect = e-118
 Identities = 229/423 (54%), Positives = 278/423 (65%), Gaps = 7/423 (1%)
 Frame = -3

Query: 1585 ETNACVHYNHTDPHSSSRWTVRESYQYMYARPWHKVLAFYSQLVRSGDGASSLSTLFFSE 1406
            E    VHY HT P   SRWT RES+Q+MY RPW +VL FYS +V    G  SL  L   E
Sbjct: 19   ENKVYVHYTHTHPTKFSRWTARESHQFMYKRPWQQVLDFYSNVVT---GRCSLLGLLGIE 75

Query: 1405 RHNTYHVTEEFQVFEDTKLATAPIRDRKGRWARVTFKIVVSYHGPSFDGWQKQPGLNTVQ 1226
             H   H  E  +  + T+      +DR GRWAR+TFKIV+SYHG SFDGWQKQPGLNTVQ
Sbjct: 76   TH-PIHDGEIVEASDKTEFGNVLTKDRGGRWARLTFKIVLSYHGASFDGWQKQPGLNTVQ 134

Query: 1225 GLIEEGLGRFVDDKKAQQLRDRSLPVEGCVVVAGRTDKGVTALQQVCSFYTWRKEVKCGE 1046
            GL+E  LGRFVD++KAQQL++++LPVEG V VAGRTDKGVTALQQVCSFYTW+K+VK  +
Sbjct: 135  GLVEASLGRFVDERKAQQLKEKNLPVEGMVTVAGRTDKGVTALQQVCSFYTWKKDVKVQD 194

Query: 1045 IEDAINKLAPGKLRTLHITEVPRVFHPNFSAKWRRYFYVFPLNE-------EEDEIDFSV 887
            IEDAIN  APGKLR + ++EV R+FHPNFSAKWR YFY+FPLN+        E+E+D   
Sbjct: 195  IEDAINGAAPGKLRVISVSEVSRIFHPNFSAKWRHYFYIFPLNDGDDGEQISENEMDIQK 254

Query: 886  KDLTSTAGGVDEEKETMQFAEEDFGHLNMLDGDEDDNRYNTSSKPRTFSISKVNKLLRQL 707
                   G    E        E+  +L      +DD  + +  KP TFSIS+V++LLRQL
Sbjct: 255  ISFNEKYGEQGSECPAQYNGGENTENLIF----DDDGEFESRKKPSTFSISRVDQLLRQL 310

Query: 706  EGKALSYKMFARDTKASRSIGPPTECFMFHARATESRLPPADEACKGQRVMCVELVANRF 527
            EGK LSYK+FARDTKASR+IGPPTECF+FHARATE+RL  +D+  +G +VMC+ELVANRF
Sbjct: 311  EGKLLSYKIFARDTKASRNIGPPTECFVFHARATEARLQFSDDG-EGTKVMCIELVANRF 369

Query: 526  LRKMVRVLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSVGLCLVDVGYSGFNHDT 347
            LRKMVRVLV                                P  GLCL+DVG++ F+   
Sbjct: 370  LRKMVRVLVATSIREAAAGAEQDALLKLMDATCRRATAPPAPPDGLCLIDVGFTEFDPQI 429

Query: 346  CLI 338
            C I
Sbjct: 430  CFI 432


>gb|EAZ01977.1| hypothetical protein OsI_24011 [Oryza sativa Indica Group]
            gi|125598125|gb|EAZ37905.1| hypothetical protein
            OsJ_22255 [Oryza sativa Japonica Group]
          Length = 417

 Score =  429 bits (1102), Expect = e-117
 Identities = 224/424 (52%), Positives = 281/424 (66%), Gaps = 5/424 (1%)
 Frame = -3

Query: 1591 AMETNACVHYNHTDPHSSSRWTVRESYQYMYARPWHKVLAFYSQLVRSGDGASSLSTLFF 1412
            A E +   HYNHTD     RWT +ESY+YMYARPW +V+ FY++LVR+G GA+ L+ LF 
Sbjct: 24   AAEGDEHAHYNHTDACHHLRWTAKESYEYMYARPWSRVVDFYAELVRTGAGAAGLADLFG 83

Query: 1411 SERHNTYHVT---EEFQVFEDTKLATAPIRDRKGRWARVTFKIVVSYHGPSFDGWQKQPG 1241
             +  N Y +    E++    + + +T   +DR GRW RVTFKIV+SYHG SFDGWQKQPG
Sbjct: 84   KDE-NGYSLDTNGEDYTAPSENQTSTKSSKDRGGRWERVTFKIVLSYHGGSFDGWQKQPG 142

Query: 1240 LNTVQGLIEEGLGRFVDDKKAQQLRDRSLPVEGCVVVAGRTDKGVTALQQVCSFYTWRKE 1061
            LNTVQGL+E+ LG+FVD+KKA+QL  RSLP+EGC VVAGRTDKGVTALQQVCSFYTWRK+
Sbjct: 143  LNTVQGLVEKHLGQFVDEKKAKQLEARSLPLEGCAVVAGRTDKGVTALQQVCSFYTWRKD 202

Query: 1060 VKCGEIEDAINKLAPGKLRTLHITEVPRVFHPNFSAKWRRYFYVFPLNEEEDEIDFSVKD 881
            VK  +I+DAINK AP KLR LH+++V R FHPNF+AKWRRY Y+FPL+E+   I      
Sbjct: 203  VKSSDIKDAINKAAPDKLRPLHVSQVSREFHPNFAAKWRRYLYIFPLDEDVKLIS----- 257

Query: 880  LTSTAGGVDEEKETMQFAEEDFGHLNMLDGDEDDNRYNTSSKPRTFSISKVNKLLRQLEG 701
                  G ++  +T++  E                    + KP++F + KV+K++RQLEG
Sbjct: 258  ------GEEQSAKTVEGPE-------------------CNIKPQSFDVGKVDKIIRQLEG 292

Query: 700  KALSYKMFARDTKASRSIGPPTECFMFHARATESRLPPADEACK--GQRVMCVELVANRF 527
            K+LSYKMFARDT+ASRS+GPPTECFMFH+RA  ++L  ADE C+    R +C+ELVANRF
Sbjct: 293  KSLSYKMFARDTQASRSVGPPTECFMFHSRAAVAKLHTADENCEEGTTRAICIELVANRF 352

Query: 526  LRKMVRVLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSVGLCLVDVGYSGFNHDT 347
            LRKMVRVLV                                P  GLCLVDVGY  FN   
Sbjct: 353  LRKMVRVLVATAIREAAAGAEEDALLNLMEATCRRATAPPAPPDGLCLVDVGYEDFNRQR 412

Query: 346  CLII 335
            C I+
Sbjct: 413  CFIV 416


>ref|XP_002331405.1| predicted protein [Populus trichocarpa] gi|222873619|gb|EEF10750.1|
            predicted protein [Populus trichocarpa]
          Length = 428

 Score =  426 bits (1096), Expect = e-117
 Identities = 233/432 (53%), Positives = 285/432 (65%), Gaps = 14/432 (3%)
 Frame = -3

Query: 1591 AMETNACVHYNHTDPHSSSRWTVRESYQYMYARPWHKVLAFYSQLVRSGDGASSLSTLFF 1412
            A      V YNHTD    SRWT RES+Q+M+ARPW +V+ FYS+ V   +G  SL  LF 
Sbjct: 3    AQNDKVYVQYNHTDSCKFSRWTARESFQFMHARPWQEVVDFYSKSV---NGQLSLLELFG 59

Query: 1411 SERHNTYHVTEEFQVFEDTKLATAPIR----------DRKGRWARVTFKIVVSYHGPSFD 1262
            ++   T  + +   V  D K+                D+ GRWARVTFKIV+SYHG SFD
Sbjct: 60   TQVFFTMELKKAHDVHCDDKIEEVSNETGLLEGVSNVDKSGRWARVTFKIVLSYHGGSFD 119

Query: 1261 GWQKQPGLNTVQGLIEEGLGRFVDDKKAQQLRDRSLPVEGCVVVAGRTDKGVTALQQVCS 1082
            GWQKQPGLNTVQGL+E+ LGRFVD+KKAQQL+++  P+EGC  VAGRTDKGV+ALQQVCS
Sbjct: 120  GWQKQPGLNTVQGLVEKSLGRFVDEKKAQQLKEQCKPLEGCASVAGRTDKGVSALQQVCS 179

Query: 1081 FYTWRKEVKCGEIEDAINKLAPGKLRTLHITEVPRVFHPNFSAKWRRYFYVFPLNE---- 914
            FYTWRK+VK  EIEDAIN +APGK+R   I+EV R FHPNFSAKWRRY Y+FPLN+    
Sbjct: 180  FYTWRKDVKPHEIEDAINDVAPGKVRVESISEVSRAFHPNFSAKWRRYLYIFPLNDGENR 239

Query: 913  EEDEIDFSVKDLTSTAGGVDEEKETMQFAEEDFGHLNMLDGDEDDNRYNTSSKPRTFSIS 734
            EE E +  +++ +S      +  E  + A E+    N +  DED+     + KPR+FS+ 
Sbjct: 240  EEIEGEGGIENFSSHENCEKQRNECGELASEE-NVENSIISDEDE--LQGAKKPRSFSVC 296

Query: 733  KVNKLLRQLEGKALSYKMFARDTKASRSIGPPTECFMFHARATESRLPPADEACKGQRVM 554
            +VN+LL+QLEGK LSYKMFARDTKASR++GPPTECF++HARATE+RLP  D   KG RVM
Sbjct: 297  RVNQLLQQLEGKLLSYKMFARDTKASRNVGPPTECFLYHARATETRLPSPDHE-KGIRVM 355

Query: 553  CVELVANRFLRKMVRVLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSVGLCLVDV 374
            CVEL+ANRFLRKMVRVLV                                P  GLCLVDV
Sbjct: 356  CVELIANRFLRKMVRVLVATSVREAAAGAQEDALLKLMDATCRRATAPPAPPDGLCLVDV 415

Query: 373  GYSGFNHDTCLI 338
            GY+ F+   CLI
Sbjct: 416  GYTEFDPRNCLI 427


>dbj|BAD45865.1| pseudouridylate synthase-like [Oryza sativa Japonica Group]
          Length = 495

 Score =  423 bits (1087), Expect = e-116
 Identities = 222/417 (53%), Positives = 278/417 (66%), Gaps = 5/417 (1%)
 Frame = -3

Query: 1591 AMETNACVHYNHTDPHSSSRWTVRESYQYMYARPWHKVLAFYSQLVRSGDGASSLSTLFF 1412
            A E +   HYNHTD     RWT +ESY+YMYARPW +V+ FY++LVR+G GA+ L+ LF 
Sbjct: 24   AAEGDEHAHYNHTDACHHLRWTAKESYEYMYARPWSRVVDFYAELVRTGAGAAGLADLFG 83

Query: 1411 SERHNTYHVT---EEFQVFEDTKLATAPIRDRKGRWARVTFKIVVSYHGPSFDGWQKQPG 1241
             +  N Y +    E++    + + +T   +DR GRW RVTFKIV+SYHG SFDGWQKQPG
Sbjct: 84   KDE-NGYSLDTNGEDYTAPSENQTSTKSSKDRGGRWERVTFKIVLSYHGGSFDGWQKQPG 142

Query: 1240 LNTVQGLIEEGLGRFVDDKKAQQLRDRSLPVEGCVVVAGRTDKGVTALQQVCSFYTWRKE 1061
            LNTVQGL+E+ LG+FVD+KKA+QL  RSLP+EGC VVAGRTDKGVTALQQVCSFYTWRK+
Sbjct: 143  LNTVQGLVEKHLGQFVDEKKAKQLEARSLPLEGCAVVAGRTDKGVTALQQVCSFYTWRKD 202

Query: 1060 VKCGEIEDAINKLAPGKLRTLHITEVPRVFHPNFSAKWRRYFYVFPLNEEEDEIDFSVKD 881
            VK  +I+DAINK AP KLR LH+++V R FHPNF+AKWRRY Y+FPL+E+   I      
Sbjct: 203  VKSSDIKDAINKAAPDKLRPLHVSQVSREFHPNFAAKWRRYLYIFPLDEDVKLIS----- 257

Query: 880  LTSTAGGVDEEKETMQFAEEDFGHLNMLDGDEDDNRYNTSSKPRTFSISKVNKLLRQLEG 701
                  G ++  +T++  E                    + KP++F + KV+K++RQLEG
Sbjct: 258  ------GEEQSAKTVEGPE-------------------CNIKPQSFDVGKVDKIIRQLEG 292

Query: 700  KALSYKMFARDTKASRSIGPPTECFMFHARATESRLPPADEACK--GQRVMCVELVANRF 527
            K+LSYKMFARDT+ASRS+GPPTECFMFH+RA  ++L  ADE C+    R +C+ELVANRF
Sbjct: 293  KSLSYKMFARDTQASRSVGPPTECFMFHSRAAVAKLHTADENCEEGTTRAICIELVANRF 352

Query: 526  LRKMVRVLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSVGLCLVDVGYSGFN 356
            LRKMVRVLV                                P  GLCLVDVGY  FN
Sbjct: 353  LRKMVRVLVATAIREAAAGAEEDALLNLMEATCRRATAPPAPPDGLCLVDVGYEDFN 409


>ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus communis]
            gi|223536579|gb|EEF38224.1| pseudouridylate synthase,
            putative [Ricinus communis]
          Length = 443

 Score =  422 bits (1086), Expect = e-115
 Identities = 226/416 (54%), Positives = 282/416 (67%), Gaps = 6/416 (1%)
 Frame = -3

Query: 1567 HYNHTDPHSSSRWTVRESYQYMYARPWHKVLAFYSQLVRSGDGASSLSTLFFSERHNTYH 1388
            HYNHTD   S RWT RES+Q+MYARPW +V  FYS +V   +G  S   LF S+ H    
Sbjct: 36   HYNHTDSCKSFRWTARESFQFMYARPWQEVSDFYSNVV---NGRLSFLELFRSQMH---F 89

Query: 1387 VTEEFQVFED---TKLATAPIRDRKGRWARVTFKIVVSYHGPSFDGWQKQPGLNTVQGLI 1217
            V ++ ++ ED   T+L      DR GRWARV FKI +SYHG SFDGWQKQPGLNTVQGL+
Sbjct: 90   VRDDAKIQEDSNKTELEHFSNEDRFGRWARVNFKIDLSYHGGSFDGWQKQPGLNTVQGLV 149

Query: 1216 EEGLGRFVDDKKAQQLRDRSLPVEGCVVVAGRTDKGVTALQQVCSFYTWRKEVKCGEIED 1037
            E+ LG+FVD+KKAQQL++   P+EGC VVAGRTDKGV+AL+QVCSFYTWRK+V+  EIED
Sbjct: 150  EKSLGKFVDEKKAQQLKEACKPLEGCAVVAGRTDKGVSALRQVCSFYTWRKDVRPHEIED 209

Query: 1036 AINKLAPGKLRTLHITEVPRVFHPNFSAKWRRYFYVFPLNEEED-EIDFSVKDLTSTAG- 863
            AIN  APGK+R + ++EV RVFHPNFSAKWRRY Y+FP+N+ ED E  F  +DL +    
Sbjct: 210  AINSSAPGKIRVISVSEVSRVFHPNFSAKWRRYLYIFPINDGEDSEQSFDSEDLENLRSY 269

Query: 862  -GVDEEKETMQFAEEDFGHLNMLDGDEDDNRYNTSSKPRTFSISKVNKLLRQLEGKALSY 686
               DE++        +     ++  D+D+     + KPR FSI +VN+LL+QLEGK LSY
Sbjct: 270  EKYDEQRNGCAELTSEEHVEELITSDKDE--LEGAKKPRIFSICRVNQLLQQLEGKLLSY 327

Query: 685  KMFARDTKASRSIGPPTECFMFHARATESRLPPADEACKGQRVMCVELVANRFLRKMVRV 506
            K+FARDTKASR++GPPTECF++HARATE+RLP  D   +G++VMCVELVANRFLRKMVRV
Sbjct: 328  KIFARDTKASRNVGPPTECFIYHARATEARLPCPDHG-EGRKVMCVELVANRFLRKMVRV 386

Query: 505  LVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSVGLCLVDVGYSGFNHDTCLI 338
            LV                                P  GLCL DVGY+ F+   C++
Sbjct: 387  LVATSIREAAAGAEDDALLKLMDASCRRASAPPAPPDGLCLFDVGYTEFDAQICIV 442