BLASTX nr result

ID: Dioscorea21_contig00018646 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018646
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150203.1| PREDICTED: CCR4-NOT transcription complex su...    96   8e-18
emb|CBI28248.3| unnamed protein product [Vitis vinifera]               95   1e-17
ref|XP_002282408.1| PREDICTED: CCR4-NOT transcription complex su...    95   1e-17
emb|CAN83603.1| hypothetical protein VITISV_020807 [Vitis vinifera]    95   1e-17
ref|XP_002531955.1| conserved hypothetical protein [Ricinus comm...    89   7e-16

>ref|XP_004150203.1| PREDICTED: CCR4-NOT transcription complex subunit 10-like [Cucumis
           sativus]
          Length = 853

 Score = 95.5 bits (236), Expect = 8e-18
 Identities = 50/84 (59%), Positives = 60/84 (71%), Gaps = 7/84 (8%)
 Frame = -3

Query: 231 MDARESSP-------GGDFPVEDDQALSVTAALAKEAAVLFQSRRYSECVDLLKQLSRLK 73
           MDAR+SS        G    VEDD ALS+TAALA+EAA LFQS +Y  CV++L QL + K
Sbjct: 1   MDARDSSSSSALNRDGSSSAVEDDGALSITAALAREAASLFQSGKYVGCVEVLNQLLQKK 60

Query: 72  EDDPKVAHNIAVAEYYHDGCFDPR 1
           EDDPKV HNIA+AEY  DGC +P+
Sbjct: 61  EDDPKVLHNIAIAEYLRDGCSNPK 84


>emb|CBI28248.3| unnamed protein product [Vitis vinifera]
          Length = 812

 Score = 95.1 bits (235), Expect = 1e-17
 Identities = 48/83 (57%), Positives = 63/83 (75%), Gaps = 6/83 (7%)
 Frame = -3

Query: 231 MDARESSPG------GDFPVEDDQALSVTAALAKEAAVLFQSRRYSECVDLLKQLSRLKE 70
           MD+R++S        G  P +DD  LSV A+LAK+AA+LFQSR++SEC+D+L QL + KE
Sbjct: 1   MDSRDTSLSSAATRDGASP-DDDAGLSVAASLAKDAALLFQSRKFSECLDVLNQLLQKKE 59

Query: 69  DDPKVAHNIAVAEYYHDGCFDPR 1
           DDPKV HNIA+AEY+ DGC DP+
Sbjct: 60  DDPKVLHNIAIAEYFRDGCSDPK 82


>ref|XP_002282408.1| PREDICTED: CCR4-NOT transcription complex subunit 10-like [Vitis
           vinifera]
          Length = 857

 Score = 95.1 bits (235), Expect = 1e-17
 Identities = 48/83 (57%), Positives = 63/83 (75%), Gaps = 6/83 (7%)
 Frame = -3

Query: 231 MDARESSPG------GDFPVEDDQALSVTAALAKEAAVLFQSRRYSECVDLLKQLSRLKE 70
           MD+R++S        G  P +DD  LSV A+LAK+AA+LFQSR++SEC+D+L QL + KE
Sbjct: 1   MDSRDTSLSSAATRDGASP-DDDAGLSVAASLAKDAALLFQSRKFSECLDVLNQLLQKKE 59

Query: 69  DDPKVAHNIAVAEYYHDGCFDPR 1
           DDPKV HNIA+AEY+ DGC DP+
Sbjct: 60  DDPKVLHNIAIAEYFRDGCSDPK 82


>emb|CAN83603.1| hypothetical protein VITISV_020807 [Vitis vinifera]
          Length = 154

 Score = 95.1 bits (235), Expect = 1e-17
 Identities = 48/83 (57%), Positives = 63/83 (75%), Gaps = 6/83 (7%)
 Frame = -3

Query: 231 MDARESSPG------GDFPVEDDQALSVTAALAKEAAVLFQSRRYSECVDLLKQLSRLKE 70
           MD+R++S        G  P +DD  LSV A+LAK+AA+LFQSR++SEC+D+L QL + KE
Sbjct: 1   MDSRDTSLSSAATRDGASP-DDDAGLSVAASLAKDAALLFQSRKFSECLDVLNQLLQKKE 59

Query: 69  DDPKVAHNIAVAEYYHDGCFDPR 1
           DDPKV HNIA+AEY+ DGC DP+
Sbjct: 60  DDPKVLHNIAIAEYFRDGCSDPK 82


>ref|XP_002531955.1| conserved hypothetical protein [Ricinus communis]
           gi|223528401|gb|EEF30437.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 851

 Score = 89.0 bits (219), Expect = 7e-16
 Identities = 41/63 (65%), Positives = 51/63 (80%)
 Frame = -3

Query: 189 EDDQALSVTAALAKEAAVLFQSRRYSECVDLLKQLSRLKEDDPKVAHNIAVAEYYHDGCF 10
           EDD  LSV AALAK+A++ FQSRR+ EC+ +L QL + KEDDPKV HNIA+AEY+ DGC 
Sbjct: 38  EDDAVLSVNAALAKDASLHFQSRRFVECLAVLYQLKQKKEDDPKVLHNIAIAEYFRDGCS 97

Query: 9   DPR 1
           DP+
Sbjct: 98  DPK 100


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