BLASTX nr result

ID: Dioscorea21_contig00018645 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018645
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28248.3| unnamed protein product [Vitis vinifera]               97   2e-18
ref|XP_002282408.1| PREDICTED: CCR4-NOT transcription complex su...    97   2e-18
emb|CAN83603.1| hypothetical protein VITISV_020807 [Vitis vinifera]    97   2e-18
ref|XP_004150203.1| PREDICTED: CCR4-NOT transcription complex su...    94   1e-17
ref|XP_002531955.1| conserved hypothetical protein [Ricinus comm...    88   6e-16

>emb|CBI28248.3| unnamed protein product [Vitis vinifera]
          Length = 812

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 50/83 (60%), Positives = 63/83 (75%), Gaps = 6/83 (7%)
 Frame = -2

Query: 231 MDERESSLG------GDFPVEDDQELSVTAALAKEAAGLFQSRRYSECVDLLKQLSRLKE 70
           MD R++SL       G  P +DD  LSV A+LAK+AA LFQSR++SEC+D+L QL + KE
Sbjct: 1   MDSRDTSLSSAATRDGASP-DDDAGLSVAASLAKDAALLFQSRKFSECLDVLNQLLQKKE 59

Query: 69  DDPKVAHNIAVAEYYRDGCFDPR 1
           DDPKV HNIA+AEY+RDGC DP+
Sbjct: 60  DDPKVLHNIAIAEYFRDGCSDPK 82


>ref|XP_002282408.1| PREDICTED: CCR4-NOT transcription complex subunit 10-like [Vitis
           vinifera]
          Length = 857

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 50/83 (60%), Positives = 63/83 (75%), Gaps = 6/83 (7%)
 Frame = -2

Query: 231 MDERESSLG------GDFPVEDDQELSVTAALAKEAAGLFQSRRYSECVDLLKQLSRLKE 70
           MD R++SL       G  P +DD  LSV A+LAK+AA LFQSR++SEC+D+L QL + KE
Sbjct: 1   MDSRDTSLSSAATRDGASP-DDDAGLSVAASLAKDAALLFQSRKFSECLDVLNQLLQKKE 59

Query: 69  DDPKVAHNIAVAEYYRDGCFDPR 1
           DDPKV HNIA+AEY+RDGC DP+
Sbjct: 60  DDPKVLHNIAIAEYFRDGCSDPK 82


>emb|CAN83603.1| hypothetical protein VITISV_020807 [Vitis vinifera]
          Length = 154

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 50/83 (60%), Positives = 63/83 (75%), Gaps = 6/83 (7%)
 Frame = -2

Query: 231 MDERESSLG------GDFPVEDDQELSVTAALAKEAAGLFQSRRYSECVDLLKQLSRLKE 70
           MD R++SL       G  P +DD  LSV A+LAK+AA LFQSR++SEC+D+L QL + KE
Sbjct: 1   MDSRDTSLSSAATRDGASP-DDDAGLSVAASLAKDAALLFQSRKFSECLDVLNQLLQKKE 59

Query: 69  DDPKVAHNIAVAEYYRDGCFDPR 1
           DDPKV HNIA+AEY+RDGC DP+
Sbjct: 60  DDPKVLHNIAIAEYFRDGCSDPK 82


>ref|XP_004150203.1| PREDICTED: CCR4-NOT transcription complex subunit 10-like [Cucumis
           sativus]
          Length = 853

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 49/84 (58%), Positives = 59/84 (70%), Gaps = 7/84 (8%)
 Frame = -2

Query: 231 MDERESSL-------GGDFPVEDDQELSVTAALAKEAAGLFQSRRYSECVDLLKQLSRLK 73
           MD R+SS        G    VEDD  LS+TAALA+EAA LFQS +Y  CV++L QL + K
Sbjct: 1   MDARDSSSSSALNRDGSSSAVEDDGALSITAALAREAASLFQSGKYVGCVEVLNQLLQKK 60

Query: 72  EDDPKVAHNIAVAEYYRDGCFDPR 1
           EDDPKV HNIA+AEY RDGC +P+
Sbjct: 61  EDDPKVLHNIAIAEYLRDGCSNPK 84


>ref|XP_002531955.1| conserved hypothetical protein [Ricinus communis]
           gi|223528401|gb|EEF30437.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 851

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 42/63 (66%), Positives = 51/63 (80%)
 Frame = -2

Query: 189 EDDQELSVTAALAKEAAGLFQSRRYSECVDLLKQLSRLKEDDPKVAHNIAVAEYYRDGCF 10
           EDD  LSV AALAK+A+  FQSRR+ EC+ +L QL + KEDDPKV HNIA+AEY+RDGC 
Sbjct: 38  EDDAVLSVNAALAKDASLHFQSRRFVECLAVLYQLKQKKEDDPKVLHNIAIAEYFRDGCS 97

Query: 9   DPR 1
           DP+
Sbjct: 98  DPK 100


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