BLASTX nr result

ID: Dioscorea21_contig00018610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018610
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315482.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
emb|CBL94162.1| putative transducin family protein / WD-40 repea...    86   4e-15
ref|XP_002871466.1| hypothetical protein ARALYDRAFT_325654 [Arab...    83   2e-14
ref|NP_196685.2| transducin/WD40 domain-containing protein [Arab...    82   6e-14
dbj|BAC43034.1| unknown protein [Arabidopsis thaliana]                 82   6e-14

>ref|XP_002315482.1| predicted protein [Populus trichocarpa] gi|222864522|gb|EEF01653.1|
           predicted protein [Populus trichocarpa]
          Length = 617

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 44/90 (48%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
 Frame = +3

Query: 3   IRGHVISMSPNDAYKFLEFLASTWKTSPDCSKDILPWIYYILVDHRRFILAQES-SSQLL 179
           +R  V+SM P++AYK LE L + W++  +  K +LPWIY ILV+H ++I+AQE   SQ+L
Sbjct: 481 MRATVLSMEPSNAYKLLEVLVAKWQSRSNSGKCVLPWIYCILVNHGQYIVAQEKPESQML 540

Query: 180 DVLQKMTSLKCSAVQTLLKLSGRAQLIMAQ 269
           + L K+T  +  AVQ LL+L+GR QL+ AQ
Sbjct: 541 NSLLKITKSRAVAVQPLLQLAGRLQLVTAQ 570


>emb|CBL94162.1| putative transducin family protein / WD-40 repeat family protein
           [Malus x domestica]
          Length = 629

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 41/89 (46%), Positives = 62/89 (69%)
 Frame = +3

Query: 3   IRGHVISMSPNDAYKFLEFLASTWKTSPDCSKDILPWIYYILVDHRRFILAQESSSQLLD 182
           +R  V+S+ P+DA K L  L +TW+T      ++LPWIY ILV+H   I++Q+S +Q+L 
Sbjct: 493 MREAVLSLEPSDACKLLGVLVATWQTRSSSGNNVLPWIYSILVNHGHDIMSQKSETQMLS 552

Query: 183 VLQKMTSLKCSAVQTLLKLSGRAQLIMAQ 269
            L K+T  + +A+Q LL++SGR QL+MAQ
Sbjct: 553 SLLKVTKSRGAAIQPLLQVSGRLQLVMAQ 581


>ref|XP_002871466.1| hypothetical protein ARALYDRAFT_325654 [Arabidopsis lyrata subsp.
           lyrata] gi|297317303|gb|EFH47725.1| hypothetical protein
           ARALYDRAFT_325654 [Arabidopsis lyrata subsp. lyrata]
          Length = 615

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/89 (44%), Positives = 61/89 (68%)
 Frame = +3

Query: 3   IRGHVISMSPNDAYKFLEFLASTWKTSPDCSKDILPWIYYILVDHRRFILAQESSSQLLD 182
           ++  V SM P+ A+K LE L + W+T     + +LPWIY I+V+H  +I++QE  +QLL+
Sbjct: 469 LKSAVSSMEPSSAFKTLEALVAMWQTRACGGRHLLPWIYSIMVNHSHYIMSQEPKNQLLN 528

Query: 183 VLQKMTSLKCSAVQTLLKLSGRAQLIMAQ 269
            L K+T  + +A+Q LL+LSGR QL+ AQ
Sbjct: 529 TLVKITKSRGTALQQLLQLSGRLQLVTAQ 557


>ref|NP_196685.2| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|209414540|gb|ACI46510.1| At5g11240 [Arabidopsis
           thaliana] gi|332004268|gb|AED91651.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 615

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 41/90 (45%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
 Frame = +3

Query: 3   IRGHVISMSPNDAYKFLEFLASTWKTSPDCSKDILPWIYYILVDHRRFILAQE-SSSQLL 179
           ++  V+SM P+ A+K LE LA+ W+T     + +LPWIY I+V+H  +I++QE  + QLL
Sbjct: 469 LKSAVLSMEPSTAFKTLEALAAMWQTRACGGRHLLPWIYSIMVNHSHYIMSQEPKNQQLL 528

Query: 180 DVLQKMTSLKCSAVQTLLKLSGRAQLIMAQ 269
           + L K+T  + +A+Q LL+LSGR QL+ AQ
Sbjct: 529 NTLVKITKSRGTALQQLLQLSGRLQLVTAQ 558


>dbj|BAC43034.1| unknown protein [Arabidopsis thaliana]
          Length = 615

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 41/90 (45%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
 Frame = +3

Query: 3   IRGHVISMSPNDAYKFLEFLASTWKTSPDCSKDILPWIYYILVDHRRFILAQE-SSSQLL 179
           ++  V+SM P+ A+K LE LA+ W+T     + +LPWIY I+V+H  +I++QE  + QLL
Sbjct: 469 LKSAVLSMEPSTAFKTLEALAAMWQTRACGGRHLLPWIYSIMVNHSHYIMSQEPKNQQLL 528

Query: 180 DVLQKMTSLKCSAVQTLLKLSGRAQLIMAQ 269
           + L K+T  + +A+Q LL+LSGR QL+ AQ
Sbjct: 529 NTLVKITKSRGTALQQLLQLSGRLQLVTAQ 558


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