BLASTX nr result
ID: Dioscorea21_contig00018610
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00018610 (269 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002315482.1| predicted protein [Populus trichocarpa] gi|2... 87 1e-15 emb|CBL94162.1| putative transducin family protein / WD-40 repea... 86 4e-15 ref|XP_002871466.1| hypothetical protein ARALYDRAFT_325654 [Arab... 83 2e-14 ref|NP_196685.2| transducin/WD40 domain-containing protein [Arab... 82 6e-14 dbj|BAC43034.1| unknown protein [Arabidopsis thaliana] 82 6e-14 >ref|XP_002315482.1| predicted protein [Populus trichocarpa] gi|222864522|gb|EEF01653.1| predicted protein [Populus trichocarpa] Length = 617 Score = 87.0 bits (214), Expect = 1e-15 Identities = 44/90 (48%), Positives = 64/90 (71%), Gaps = 1/90 (1%) Frame = +3 Query: 3 IRGHVISMSPNDAYKFLEFLASTWKTSPDCSKDILPWIYYILVDHRRFILAQES-SSQLL 179 +R V+SM P++AYK LE L + W++ + K +LPWIY ILV+H ++I+AQE SQ+L Sbjct: 481 MRATVLSMEPSNAYKLLEVLVAKWQSRSNSGKCVLPWIYCILVNHGQYIVAQEKPESQML 540 Query: 180 DVLQKMTSLKCSAVQTLLKLSGRAQLIMAQ 269 + L K+T + AVQ LL+L+GR QL+ AQ Sbjct: 541 NSLLKITKSRAVAVQPLLQLAGRLQLVTAQ 570 >emb|CBL94162.1| putative transducin family protein / WD-40 repeat family protein [Malus x domestica] Length = 629 Score = 85.5 bits (210), Expect = 4e-15 Identities = 41/89 (46%), Positives = 62/89 (69%) Frame = +3 Query: 3 IRGHVISMSPNDAYKFLEFLASTWKTSPDCSKDILPWIYYILVDHRRFILAQESSSQLLD 182 +R V+S+ P+DA K L L +TW+T ++LPWIY ILV+H I++Q+S +Q+L Sbjct: 493 MREAVLSLEPSDACKLLGVLVATWQTRSSSGNNVLPWIYSILVNHGHDIMSQKSETQMLS 552 Query: 183 VLQKMTSLKCSAVQTLLKLSGRAQLIMAQ 269 L K+T + +A+Q LL++SGR QL+MAQ Sbjct: 553 SLLKVTKSRGAAIQPLLQVSGRLQLVMAQ 581 >ref|XP_002871466.1| hypothetical protein ARALYDRAFT_325654 [Arabidopsis lyrata subsp. lyrata] gi|297317303|gb|EFH47725.1| hypothetical protein ARALYDRAFT_325654 [Arabidopsis lyrata subsp. lyrata] Length = 615 Score = 83.2 bits (204), Expect = 2e-14 Identities = 40/89 (44%), Positives = 61/89 (68%) Frame = +3 Query: 3 IRGHVISMSPNDAYKFLEFLASTWKTSPDCSKDILPWIYYILVDHRRFILAQESSSQLLD 182 ++ V SM P+ A+K LE L + W+T + +LPWIY I+V+H +I++QE +QLL+ Sbjct: 469 LKSAVSSMEPSSAFKTLEALVAMWQTRACGGRHLLPWIYSIMVNHSHYIMSQEPKNQLLN 528 Query: 183 VLQKMTSLKCSAVQTLLKLSGRAQLIMAQ 269 L K+T + +A+Q LL+LSGR QL+ AQ Sbjct: 529 TLVKITKSRGTALQQLLQLSGRLQLVTAQ 557 >ref|NP_196685.2| transducin/WD40 domain-containing protein [Arabidopsis thaliana] gi|209414540|gb|ACI46510.1| At5g11240 [Arabidopsis thaliana] gi|332004268|gb|AED91651.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] Length = 615 Score = 81.6 bits (200), Expect = 6e-14 Identities = 41/90 (45%), Positives = 63/90 (70%), Gaps = 1/90 (1%) Frame = +3 Query: 3 IRGHVISMSPNDAYKFLEFLASTWKTSPDCSKDILPWIYYILVDHRRFILAQE-SSSQLL 179 ++ V+SM P+ A+K LE LA+ W+T + +LPWIY I+V+H +I++QE + QLL Sbjct: 469 LKSAVLSMEPSTAFKTLEALAAMWQTRACGGRHLLPWIYSIMVNHSHYIMSQEPKNQQLL 528 Query: 180 DVLQKMTSLKCSAVQTLLKLSGRAQLIMAQ 269 + L K+T + +A+Q LL+LSGR QL+ AQ Sbjct: 529 NTLVKITKSRGTALQQLLQLSGRLQLVTAQ 558 >dbj|BAC43034.1| unknown protein [Arabidopsis thaliana] Length = 615 Score = 81.6 bits (200), Expect = 6e-14 Identities = 41/90 (45%), Positives = 63/90 (70%), Gaps = 1/90 (1%) Frame = +3 Query: 3 IRGHVISMSPNDAYKFLEFLASTWKTSPDCSKDILPWIYYILVDHRRFILAQE-SSSQLL 179 ++ V+SM P+ A+K LE LA+ W+T + +LPWIY I+V+H +I++QE + QLL Sbjct: 469 LKSAVLSMEPSTAFKTLEALAAMWQTRACGGRHLLPWIYSIMVNHSHYIMSQEPKNQQLL 528 Query: 180 DVLQKMTSLKCSAVQTLLKLSGRAQLIMAQ 269 + L K+T + +A+Q LL+LSGR QL+ AQ Sbjct: 529 NTLVKITKSRGTALQQLLQLSGRLQLVTAQ 558