BLASTX nr result

ID: Dioscorea21_contig00018577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018577
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594206.1| Transcription initiation factor IIF subunit ...    91   1e-16
ref|XP_003546179.1| PREDICTED: transcription initiation factor I...    89   5e-16
ref|XP_003534809.1| PREDICTED: transcription initiation factor I...    89   5e-16
ref|XP_002262798.2| PREDICTED: transcription initiation factor I...    88   6e-16
emb|CBI33123.3| unnamed protein product [Vitis vinifera]               88   6e-16

>ref|XP_003594206.1| Transcription initiation factor IIF subunit alpha [Medicago
           truncatula] gi|87241158|gb|ABD33016.1| Transcription
           Factor IIF, Rap30/Rap74, interaction [Medicago
           truncatula] gi|355483254|gb|AES64457.1| Transcription
           initiation factor IIF subunit alpha [Medicago
           truncatula]
          Length = 536

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 39/44 (88%), Positives = 43/44 (97%)
 Frame = -3

Query: 134 WEHEEIFTDDDEAVGNNPEEREDLAPEIPAPPEIKQDDEDEAEE 3
           WEHEEIFTDDDEAVGN+PEEREDLAPE+PAPPEIKQDDE+E E+
Sbjct: 283 WEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPEIKQDDEEEEED 326


>ref|XP_003546179.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
           [Glycine max]
          Length = 539

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 38/44 (86%), Positives = 43/44 (97%)
 Frame = -3

Query: 134 WEHEEIFTDDDEAVGNNPEEREDLAPEIPAPPEIKQDDEDEAEE 3
           WEHEEIFTDDDEAVGN+PEEREDLAPE+PAPPEIKQD+E+E E+
Sbjct: 285 WEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPEIKQDEEEEDED 328


>ref|XP_003534809.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
           [Glycine max]
          Length = 541

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 38/44 (86%), Positives = 43/44 (97%)
 Frame = -3

Query: 134 WEHEEIFTDDDEAVGNNPEEREDLAPEIPAPPEIKQDDEDEAEE 3
           WEHEEIFTDDDEAVGN+PEEREDLAPE+PAPPEIKQD+E+E E+
Sbjct: 285 WEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPEIKQDEEEEDED 328


>ref|XP_002262798.2| PREDICTED: transcription initiation factor IIF subunit alpha-like
           [Vitis vinifera]
          Length = 534

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 38/41 (92%), Positives = 41/41 (100%)
 Frame = -3

Query: 134 WEHEEIFTDDDEAVGNNPEEREDLAPEIPAPPEIKQDDEDE 12
           WEHEEIFTDDDEAVGN+PEEREDLAPE+PAPPEIKQD+EDE
Sbjct: 283 WEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPEIKQDEEDE 323


>emb|CBI33123.3| unnamed protein product [Vitis vinifera]
          Length = 539

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 38/41 (92%), Positives = 41/41 (100%)
 Frame = -3

Query: 134 WEHEEIFTDDDEAVGNNPEEREDLAPEIPAPPEIKQDDEDE 12
           WEHEEIFTDDDEAVGN+PEEREDLAPE+PAPPEIKQD+EDE
Sbjct: 288 WEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPEIKQDEEDE 328


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