BLASTX nr result

ID: Dioscorea21_contig00018566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018566
         (600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25922.1| unknown [Picea sitchensis]                             112   6e-23
emb|CBI21383.3| unnamed protein product [Vitis vinifera]              103   2e-20
ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247...   103   2e-20
ref|XP_003611682.1| RNA-binding protein with multiple splicing [...   103   2e-20
emb|CAN64038.1| hypothetical protein VITISV_021557 [Vitis vinifera]   102   5e-20

>gb|ABK25922.1| unknown [Picea sitchensis]
          Length = 345

 Score =  112 bits (279), Expect = 6e-23
 Identities = 54/81 (66%), Positives = 65/81 (80%)
 Frame = -2

Query: 251 EFPGFQNCQLKSSGPSSQAYGFVVFTDQQSAVAAMHTLNGMVFDLEKESTLFIELAKSNS 72
           EFPG+++CQL++S   +Q Y F VFTDQQSA+AAMH LNGM FD E  + L+I+LAKSNS
Sbjct: 105 EFPGYRSCQLRNSEGGTQVYAFTVFTDQQSALAAMHALNGMDFDPETRAVLYIDLAKSNS 164

Query: 71  RPKRSRADDGVSFSSDKRVRG 9
           R KRSR DDG S SSDKR+RG
Sbjct: 165 RSKRSRTDDGGSNSSDKRIRG 185


>emb|CBI21383.3| unnamed protein product [Vitis vinifera]
          Length = 333

 Score =  103 bits (258), Expect = 2e-20
 Identities = 53/82 (64%), Positives = 64/82 (78%)
 Frame = -2

Query: 251 EFPGFQNCQLKSSGPSSQAYGFVVFTDQQSAVAAMHTLNGMVFDLEKESTLFIELAKSNS 72
           EFPG+++  L+S   +SQ + F VF DQQSA+AAMH LNGMVFDLEK STL+I+LAKSNS
Sbjct: 100 EFPGYESSHLRSPSQNSQPFAFAVFLDQQSAIAAMHALNGMVFDLEKGSTLYIDLAKSNS 159

Query: 71  RPKRSRADDGVSFSSDKRVRGS 6
           R KRSRADD      DK+V+GS
Sbjct: 160 RSKRSRADDERP-GLDKKVKGS 180


>ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247532 [Vitis vinifera]
          Length = 336

 Score =  103 bits (258), Expect = 2e-20
 Identities = 53/82 (64%), Positives = 64/82 (78%)
 Frame = -2

Query: 251 EFPGFQNCQLKSSGPSSQAYGFVVFTDQQSAVAAMHTLNGMVFDLEKESTLFIELAKSNS 72
           EFPG+++  L+S   +SQ + F VF DQQSA+AAMH LNGMVFDLEK STL+I+LAKSNS
Sbjct: 103 EFPGYESSHLRSPSQNSQPFAFAVFLDQQSAIAAMHALNGMVFDLEKGSTLYIDLAKSNS 162

Query: 71  RPKRSRADDGVSFSSDKRVRGS 6
           R KRSRADD      DK+V+GS
Sbjct: 163 RSKRSRADDERP-GLDKKVKGS 183


>ref|XP_003611682.1| RNA-binding protein with multiple splicing [Medicago truncatula]
           gi|355513017|gb|AES94640.1| RNA-binding protein with
           multiple splicing [Medicago truncatula]
          Length = 340

 Score =  103 bits (257), Expect = 2e-20
 Identities = 51/82 (62%), Positives = 66/82 (80%)
 Frame = -2

Query: 251 EFPGFQNCQLKSSGPSSQAYGFVVFTDQQSAVAAMHTLNGMVFDLEKESTLFIELAKSNS 72
           EFPG+++  L+S   SSQA+ F VF++QQSA+ A+H LNGM+FDLEK STL+I+LAKSNS
Sbjct: 104 EFPGYESSHLRSPNNSSQAFAFAVFSNQQSAIMALHALNGMIFDLEKGSTLYIDLAKSNS 163

Query: 71  RPKRSRADDGVSFSSDKRVRGS 6
           R KR+R DD  + SSDK+ RGS
Sbjct: 164 RAKRARIDDDRA-SSDKKARGS 184


>emb|CAN64038.1| hypothetical protein VITISV_021557 [Vitis vinifera]
          Length = 335

 Score =  102 bits (254), Expect = 5e-20
 Identities = 52/82 (63%), Positives = 63/82 (76%)
 Frame = -2

Query: 251 EFPGFQNCQLKSSGPSSQAYGFVVFTDQQSAVAAMHTLNGMVFDLEKESTLFIELAKSNS 72
           EFPG+++  L+S   +SQ + F VF DQQSA+A MH LNGMVFDLEK STL+I+LAKSNS
Sbjct: 100 EFPGYESSHLRSPSQNSQPFAFAVFLDQQSAIATMHALNGMVFDLEKGSTLYIDLAKSNS 159

Query: 71  RPKRSRADDGVSFSSDKRVRGS 6
           R KRSRADD      DK+V+GS
Sbjct: 160 RSKRSRADDERP-GLDKKVKGS 180


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