BLASTX nr result

ID: Dioscorea21_contig00018552 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018552
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [...   162   3e-38
ref|XP_003606229.1| FAR1-related protein [Medicago truncatula] g...   143   2e-32
ref|XP_003576263.1| PREDICTED: protein FAR1-RELATED SEQUENCE 2-l...   137   1e-30
gb|ABA95414.1| transposon protein, putative, unclassified [Oryza...   136   2e-30
gb|EEE52553.1| hypothetical protein OsJ_34801 [Oryza sativa Japo...   136   2e-30

>gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [Medicago
           truncatula]
          Length = 1116

 Score =  162 bits (409), Expect = 3e-38
 Identities = 70/116 (60%), Positives = 95/116 (81%)
 Frame = -1

Query: 352 DGCFTISSVILEHNHALSPHKSRFQKCNKKIDAHVRRRLEVNDQAGITLSKNFHSLAVEG 173
           DG  TI+ V LEHNH LSP KSR+ +CNK +D H +RRL++NDQAGI +S+NF S+ VE 
Sbjct: 433 DGKITITKVALEHNHGLSPTKSRYFRCNKNLDPHTKRRLDINDQAGINVSRNFRSMVVEA 492

Query: 172 GGYENLTYTEKDCRNYIAKARQFRLGVGDSEALANYFLRMQQRNSNFFHLIDMDEE 5
            GY+NLT+ EKDCRNYI KAR+ RLG GD+EA+ NYF+RMQ++NS F++++D+D++
Sbjct: 493 NGYDNLTFGEKDCRNYIDKARRLRLGTGDAEAIQNYFVRMQKKNSQFYYVMDVDDK 548


>ref|XP_003606229.1| FAR1-related protein [Medicago truncatula]
           gi|355507284|gb|AES88426.1| FAR1-related protein
           [Medicago truncatula]
          Length = 446

 Score =  143 bits (360), Expect = 2e-32
 Identities = 62/116 (53%), Positives = 88/116 (75%)
 Frame = -1

Query: 352 DGCFTISSVILEHNHALSPHKSRFQKCNKKIDAHVRRRLEVNDQAGITLSKNFHSLAVEG 173
           D    I+ V LEH+H LSP KS + +CNK +D H +RRL++NDQAGI +S+NF  + VE 
Sbjct: 79  DEKIAITKVALEHSHELSPTKSIYFRCNKNLDPHTKRRLDINDQAGINVSRNFRYMVVEA 138

Query: 172 GGYENLTYTEKDCRNYIAKARQFRLGVGDSEALANYFLRMQQRNSNFFHLIDMDEE 5
            GY+NLT+ EKDCRNY+ K R+ RLG+GD EA+ NYF+ MQ +NS F++++D+D++
Sbjct: 139 NGYDNLTFGEKDCRNYMDKVRRLRLGIGDVEAIQNYFVIMQMKNSQFYYVMDVDDK 194


>ref|XP_003576263.1| PREDICTED: protein FAR1-RELATED SEQUENCE 2-like [Brachypodium
           distachyon]
          Length = 561

 Score =  137 bits (344), Expect = 1e-30
 Identities = 60/111 (54%), Positives = 86/111 (77%)
 Frame = -1

Query: 358 GNDGCFTISSVILEHNHALSPHKSRFQKCNKKIDAHVRRRLEVNDQAGITLSKNFHSLAV 179
           G DG F +S+VI +HNH LSPH SR  +CNK+++ +V+RRLE+ND+AGI ++KNF+SL V
Sbjct: 129 GPDGTFHLSTVISDHNHTLSPHTSRLFRCNKRLNFNVKRRLELNDRAGIRVNKNFNSLVV 188

Query: 178 EGGGYENLTYTEKDCRNYIAKARQFRLGVGDSEALANYFLRMQQRNSNFFH 26
              G+ENLT+ EK+CRNY+ K R+ + G GD+EA+ +YF++MQ  N  FF+
Sbjct: 189 AADGHENLTFGEKECRNYLEKTRRLKFGSGDAEAVRDYFMKMQSDNPKFFN 239


>gb|ABA95414.1| transposon protein, putative, unclassified [Oryza sativa Japonica
           Group]
          Length = 862

 Score =  136 bits (343), Expect = 2e-30
 Identities = 59/117 (50%), Positives = 88/117 (75%)
 Frame = -1

Query: 355 NDGCFTISSVILEHNHALSPHKSRFQKCNKKIDAHVRRRLEVNDQAGITLSKNFHSLAVE 176
           +D  F IS++ L+HNH +SP K+R  +C+KK+D   +RRLE+NDQA I ++KNF SL ++
Sbjct: 103 HDEKFCISTLTLDHNHVVSPSKARHLRCHKKLDLQAKRRLELNDQARIRINKNFSSLVMQ 162

Query: 175 GGGYENLTYTEKDCRNYIAKARQFRLGVGDSEALANYFLRMQQRNSNFFHLIDMDEE 5
            GGYENL + EK+CRNY+   R+ +LG GD+ A+  YFLRM  ++ NFF+++D+DE+
Sbjct: 163 AGGYENLQFGEKECRNYLQDVRKLKLGAGDAHAVYQYFLRMTSKDPNFFYVMDVDED 219


>gb|EEE52553.1| hypothetical protein OsJ_34801 [Oryza sativa Japonica Group]
          Length = 965

 Score =  136 bits (343), Expect = 2e-30
 Identities = 59/117 (50%), Positives = 88/117 (75%)
 Frame = -1

Query: 355 NDGCFTISSVILEHNHALSPHKSRFQKCNKKIDAHVRRRLEVNDQAGITLSKNFHSLAVE 176
           +D  F IS++ L+HNH +SP K+R  +C+KK+D   +RRLE+NDQA I ++KNF SL ++
Sbjct: 103 HDEKFCISTLTLDHNHVVSPSKARHLRCHKKLDLQAKRRLELNDQARIRINKNFSSLVMQ 162

Query: 175 GGGYENLTYTEKDCRNYIAKARQFRLGVGDSEALANYFLRMQQRNSNFFHLIDMDEE 5
            GGYENL + EK+CRNY+   R+ +LG GD+ A+  YFLRM  ++ NFF+++D+DE+
Sbjct: 163 AGGYENLQFGEKECRNYLQDVRKLKLGAGDAHAVYQYFLRMTSKDPNFFYVMDVDED 219


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