BLASTX nr result

ID: Dioscorea21_contig00018539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018539
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608020.1| hypothetical protein MTR_4g086620 [Medicago ...    83   3e-14
ref|XP_002885977.1| calmodulin-binding protein [Arabidopsis lyra...    74   2e-11
ref|XP_002521862.1| conserved hypothetical protein [Ricinus comm...    73   3e-11
ref|NP_565379.1| uncharacterized protein [Arabidopsis thaliana] ...    70   3e-10
gb|EEC69486.1| hypothetical protein OsI_38701 [Oryza sativa Indi...    67   2e-09

>ref|XP_003608020.1| hypothetical protein MTR_4g086620 [Medicago truncatula]
           gi|355509075|gb|AES90217.1| hypothetical protein
           MTR_4g086620 [Medicago truncatula]
          Length = 320

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 60/175 (34%), Positives = 96/175 (54%), Gaps = 31/175 (17%)
 Frame = +1

Query: 130 VAPMPPEKNFHTETASSTPYVSAPSSPRAGGFDYLYHYTSAPASPTRINAIY---SLNF- 297
           VAP  P  +F+ ++  S+PY++APSSP+    ++ +   SAP SP+R++ ++   SL F 
Sbjct: 7   VAPPTPPVDFNFDSNCSSPYITAPSSPQRFANNFFF---SAPTSPSRVSPLFSESSLPFH 63

Query: 298 ---QPDEHDHDHFPVEDNDFEFNFSGQLQKGALPPELTAADELFEAGKFKTTMK--QPKS 462
              +P+ H +++    D+DFEF+FSG LQK      L+AADELF+ GK +  MK   P S
Sbjct: 64  QETKPNNHHNNYSFGNDDDFEFDFSGNLQK----ESLSAADELFDGGKIR-PMKPLPPNS 118

Query: 463 PQSHSRTSAND---------------------FRRDNQRAKSNSSR-ARSLSPLR 561
           P++  + + +D                      +R  +R  S+  + +RSLSPLR
Sbjct: 119 PRTRKKKAVHDNTERDSNPFEAAIEETLRKEEEKRGRERVTSSGRKGSRSLSPLR 173


>ref|XP_002885977.1| calmodulin-binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297331817|gb|EFH62236.1| calmodulin-binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 317

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 60/164 (36%), Positives = 83/164 (50%), Gaps = 17/164 (10%)
 Frame = +1

Query: 121 MEV-VAPMPPEKNFHTETASSTPYVSAPSSPRAGGFDYLYHYTSAPASP---TRINAIYS 288
           ME+ VA    E NF + T+S  PY++APSSP   G + ++ + SAP SP   T  N  Y 
Sbjct: 1   MEIEVAVASAELNFDSTTSS--PYITAPSSPTRFGNNNVFFF-SAPTSPSPSTSSNIPYD 57

Query: 289 LNFQPDEHDHDHFPVEDNDFEFNFSGQLQKGALPPELTAADELFEAGKFK-------TTM 447
            + QP           ++DFEFNFSGQL+K       +AADELF+ GK +        T+
Sbjct: 58  WDDQPRTPKKRSASDFEDDFEFNFSGQLEK----TSFSAADELFDGGKIRPLGPPLTPTV 113

Query: 448 KQPKSPQSHSRTSANDFRRDNQRAKSNSSR------ARSLSPLR 561
             P+S       S +   R   R+  +SS       +RS+SPLR
Sbjct: 114 SSPRSRDLEIEVSDDQKDRGRDRSPGSSSSRYDRKGSRSMSPLR 157


>ref|XP_002521862.1| conserved hypothetical protein [Ricinus communis]
           gi|223538900|gb|EEF40498.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 382

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 57/177 (32%), Positives = 90/177 (50%), Gaps = 28/177 (15%)
 Frame = +1

Query: 115 IHMEVVAPMPPEK-NFHTETASSTPYVSAPSSP-RAGGFDYLYHYTSAPASPTRINAIY- 285
           + MEVV  +PP   +F+ ++  S+PY++APSSP R G F     ++SAP SPTR ++ + 
Sbjct: 1   MEMEVVVAVPPVPVDFNFDSTCSSPYMTAPSSPQRFGNF-----FSSAPTSPTRSSSFFR 55

Query: 286 ------------SLNFQPDE------------HDHDHFP-VEDNDFEFNFSGQLQKGALP 390
                       S+ F  +E            HD + F  ++D DFEF+FSGQL + +L 
Sbjct: 56  ELNDVSLATNSSSIPFDWEEKPGTPKARKNTNHDSEDFDFIDDGDFEFDFSGQLDRTSL- 114

Query: 391 PELTAADELFEAGKFKTTMKQPKSPQSHSRTSANDFRRDNQRAKSNSSRARSLSPLR 561
               +ADELF+ GK +     P  P     +S +  R  + R++ N+ + +   P R
Sbjct: 115 ----SADELFDGGKIR-----PLKPPPGYDSSVSSPRSSSPRSR-NAQKKKDFDPFR 161


>ref|NP_565379.1| uncharacterized protein [Arabidopsis thaliana]
           gi|13569554|gb|AAK31147.1|AF345343_1 unknown
           [Arabidopsis thaliana] gi|5306255|gb|AAD41988.1|
           expressed protein [Arabidopsis thaliana]
           gi|20197707|gb|AAM15217.1| expressed protein
           [Arabidopsis thaliana] gi|21593841|gb|AAM65808.1|
           unknown [Arabidopsis thaliana]
           gi|111074358|gb|ABH04552.1| At2g15760 [Arabidopsis
           thaliana] gi|330251341|gb|AEC06435.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 315

 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 61/169 (36%), Positives = 87/169 (51%), Gaps = 20/169 (11%)
 Frame = +1

Query: 115 IHMEVVAPMPPEKNFHTETASSTPYVSAPSSPRAGGFDYLYHYTSAPASPTRINAIYSLN 294
           + +EV      E NF + T+S  PY++APSSP   G ++     SAP SP+      S N
Sbjct: 1   MEIEVAEAAAAELNFDSTTSS--PYITAPSSPTRFGNNFF----SAPTSPSPST---SSN 51

Query: 295 FQPDEHDHDHFPVE------DNDFEFNFSGQLQKGALPPELTAADELFEAGKFKTTMKQP 456
              D  D    P +      ++DFEFNFSGQL+K       +AADELF+ GK +  ++ P
Sbjct: 52  IPFDWDDQPRTPKKRSAIGFEDDFEFNFSGQLEK----TSFSAADELFDGGKIR-PLRTP 106

Query: 457 KSPQSHSRTSA------NDFRRDNQRAK---SNSSR-----ARSLSPLR 561
            +P   S  S       +D ++D  R +   S+SSR     +RS+SPLR
Sbjct: 107 LTPTVSSPRSRGLEIEDSDDQKDRGRDRSPGSSSSRYDRKGSRSMSPLR 155


>gb|EEC69486.1| hypothetical protein OsI_38701 [Oryza sativa Indica Group]
          Length = 299

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 49/142 (34%), Positives = 68/142 (47%), Gaps = 10/142 (7%)
 Frame = +1

Query: 166 ETASSTPYVSAPSSPRAGGFDYLYHYTSAPASPTRINAIYSLNFQPDEHDHDH-----FP 330
           ++A STP+VSAPSSP A    +   + SAPASP               H H H       
Sbjct: 21  DSACSTPFVSAPSSPAARDAPFPGGFFSAPASPA-------------HHHHHHGGEGGGD 67

Query: 331 VEDNDFEFNFSGQLQKGALPPELTAADELFEAGKFKTTMKQP-----KSPQSHSRTSAND 495
            E+ +FEF+FS +    A P  +++ADELF  G+ +    QP     ++P+      A D
Sbjct: 68  GEEYEFEFDFSSRFPSPA-PAAMSSADELFHNGQIRPMRLQPLVGGGETPREELEVGAGD 126

Query: 496 FRRDNQRAKSNSSRARSLSPLR 561
            R    R +S   R+RS SP R
Sbjct: 127 ERGGRLRCRSVRRRSRSHSPFR 148


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