BLASTX nr result

ID: Dioscorea21_contig00018534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018534
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635354.1| PREDICTED: uncharacterized protein LOC100854...   103   1e-20
ref|XP_003557047.1| PREDICTED: uncharacterized protein LOC100784...   103   1e-20
ref|XP_002273299.2| PREDICTED: uncharacterized protein LOC100250...   100   2e-19
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    96   3e-18
emb|CAN82562.1| hypothetical protein VITISV_014148 [Vitis vinifera]    94   1e-17

>ref|XP_003635354.1| PREDICTED: uncharacterized protein LOC100854728 [Vitis vinifera]
          Length = 2807

 Score =  103 bits (258), Expect = 1e-20
 Identities = 53/103 (51%), Positives = 68/103 (66%)
 Frame = +3

Query: 3    GDCVLLKLQPYRQLSLARRSSFKLARRFLGPFQVQERIGAVAYRLLLPDSAKKHNVFHVS 182
            GD VL++LQPYRQ + A R   KLA+R+ GP+QV ERIGAVAYRL LP   K H VFH+S
Sbjct: 1175 GDMVLVRLQPYRQTTAAHRPYQKLAKRYYGPYQVLERIGAVAYRLALPSGCKIHPVFHIS 1234

Query: 183  KMKLFKGELPTVTSSLPGEFVQQHPLLEPKAILKHRDLIKGGQ 311
             +K F+G +P     LP   +  HPLL P AI   R +++ G+
Sbjct: 1235 ALKPFRGPVPDKVYPLPTATMGIHPLLVPAAICAVRTILRQGK 1277


>ref|XP_003557047.1| PREDICTED: uncharacterized protein LOC100784241 [Glycine max]
          Length = 1523

 Score =  103 bits (257), Expect = 1e-20
 Identities = 60/100 (60%), Positives = 68/100 (68%), Gaps = 4/100 (4%)
 Frame = +3

Query: 3    GDCVLLKLQPYRQLSLARRSSF--KLARRFLGPFQVQERIGAVAYRLLLPDSAKKHNVFH 176
            GD VLL+L+PYRQ S    SS   KLA+RF GPFQV ERIG VAY+L LPD AK H VFH
Sbjct: 1001 GDWVLLRLRPYRQSSTKGNSSVCAKLAKRFYGPFQVIERIGPVAYKLKLPDEAKIHPVFH 1060

Query: 177  VSKMKLFKGELPTVTS--SLPGEFVQQHPLLEPKAILKHR 290
             SK+K F+G  PT  S  SLP  F+   PL+ P AIL HR
Sbjct: 1061 CSKLKPFRGP-PTSPSPESLPQTFINDQPLISPLAILNHR 1099


>ref|XP_002273299.2| PREDICTED: uncharacterized protein LOC100250138 [Vitis vinifera]
          Length = 1406

 Score =  100 bits (248), Expect = 2e-19
 Identities = 51/103 (49%), Positives = 67/103 (65%)
 Frame = +3

Query: 3   GDCVLLKLQPYRQLSLARRSSFKLARRFLGPFQVQERIGAVAYRLLLPDSAKKHNVFHVS 182
           GD VL++LQPYRQ + A R   KLA+R+ GP+QV ERIGAVAYRL LP   K H +FH+S
Sbjct: 561 GDMVLVRLQPYRQTTAAHRPYQKLAKRYYGPYQVLERIGAVAYRLALPSGCKIHPMFHIS 620

Query: 183 KMKLFKGELPTVTSSLPGEFVQQHPLLEPKAILKHRDLIKGGQ 311
             K F+G +P     LP E +  HPLL   A+   R +++ G+
Sbjct: 621 AFKPFRGPVPEEVYPLPTETMGIHPLLVLAAVCAVRTILRQGK 663


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 52/106 (49%), Positives = 67/106 (63%)
 Frame = +3

Query: 3    GDCVLLKLQPYRQLSLARRSSFKLARRFLGPFQVQERIGAVAYRLLLPDSAKKHNVFHVS 182
            GD V L+LQPYRQ SLA+R   KLA RF GPF V +RIGA AY+L LP S+K H VFHVS
Sbjct: 1454 GDAVFLRLQPYRQRSLAKRPFEKLAPRFYGPFTVLQRIGATAYKLQLPPSSKIHPVFHVS 1513

Query: 183  KMKLFKGELPTVTSSLPGEFVQQHPLLEPKAILKHRDLIKGGQVFS 320
             +K   G  P + +  P   V    ++EP+ +L  R + +G Q F+
Sbjct: 1514 LLKKVVGNTPVLPTIPPHIDVDMELVVEPEELLDVRQIRQGKQTFT 1559


>emb|CAN82562.1| hypothetical protein VITISV_014148 [Vitis vinifera]
          Length = 1384

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 51/105 (48%), Positives = 68/105 (64%)
 Frame = +3

Query: 3    GDCVLLKLQPYRQLSLARRSSFKLARRFLGPFQVQERIGAVAYRLLLPDSAKKHNVFHVS 182
            GD V LKLQPYRQ S+   +S KLA RF GP+Q+++RIG VAY+L LP+ +K H +FHVS
Sbjct: 1219 GDMVFLKLQPYRQQSVFCXASQKLASRFYGPYQIEQRIGKVAYKLNLPEGSKIHPIFHVS 1278

Query: 183  KMKLFKGELPTVTSSLPGEFVQQHPLLEPKAILKHRDLIKGGQVF 317
             +K   GE    T  LP    +   +LEP+ IL  R + KG ++F
Sbjct: 1279 LLKKKLGEPNNTTVELPLTDDEGEIVLEPEGILDTRWVKKGSRIF 1323


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