BLASTX nr result

ID: Dioscorea21_contig00018530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018530
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280330.1| PREDICTED: LIMR family protein At5g01460 [Vi...    70   1e-10
ref|XP_003520496.1| PREDICTED: LIMR family protein At3g08930-lik...    69   3e-10
ref|XP_002323579.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|XP_003552245.1| PREDICTED: LIMR family protein At5g01460-lik...    67   1e-09
ref|XP_003548743.1| PREDICTED: LOW QUALITY PROTEIN: LIMR family ...    67   1e-09

>ref|XP_002280330.1| PREDICTED: LIMR family protein At5g01460 [Vitis vinifera]
           gi|297740207|emb|CBI30389.3| unnamed protein product
           [Vitis vinifera]
          Length = 509

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 33/42 (78%), Positives = 36/42 (85%)
 Frame = -1

Query: 245 YLYKYNVFQIAFIAFAALTFVYYLLFGWRRRRPTAGRFQLTN 120
           YLYKYNVFQIAFI  A LTFVYY  FGWRRRRP +GRFQL++
Sbjct: 469 YLYKYNVFQIAFIVLAGLTFVYYAAFGWRRRRP-SGRFQLSS 509


>ref|XP_003520496.1| PREDICTED: LIMR family protein At3g08930-like [Glycine max]
          Length = 508

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 31/42 (73%), Positives = 37/42 (88%)
 Frame = -1

Query: 245 YLYKYNVFQIAFIAFAALTFVYYLLFGWRRRRPTAGRFQLTN 120
           YLYKYNVFQIAF+A A LTFVYY  FGWRR++P +GRFQL++
Sbjct: 468 YLYKYNVFQIAFVALAGLTFVYYAAFGWRRKKP-SGRFQLSS 508


>ref|XP_002323579.1| predicted protein [Populus trichocarpa] gi|222868209|gb|EEF05340.1|
           predicted protein [Populus trichocarpa]
          Length = 509

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 30/42 (71%), Positives = 36/42 (85%)
 Frame = -1

Query: 245 YLYKYNVFQIAFIAFAALTFVYYLLFGWRRRRPTAGRFQLTN 120
           YLYKYNVFQIAF+  A LTFVYY  FGWRR++P +GRFQL++
Sbjct: 469 YLYKYNVFQIAFVVLAGLTFVYYAAFGWRRKKP-SGRFQLSS 509


>ref|XP_003552245.1| PREDICTED: LIMR family protein At5g01460-like [Glycine max]
          Length = 509

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/41 (73%), Positives = 35/41 (85%)
 Frame = -1

Query: 245 YLYKYNVFQIAFIAFAALTFVYYLLFGWRRRRPTAGRFQLT 123
           YLYKYNVFQIAF+  A LTFVYY  FGWRR++P +GRFQL+
Sbjct: 469 YLYKYNVFQIAFVVLAGLTFVYYAAFGWRRKKP-SGRFQLS 508


>ref|XP_003548743.1| PREDICTED: LOW QUALITY PROTEIN: LIMR family protein At5g01460-like
           [Glycine max]
          Length = 400

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/41 (73%), Positives = 35/41 (85%)
 Frame = -1

Query: 245 YLYKYNVFQIAFIAFAALTFVYYLLFGWRRRRPTAGRFQLT 123
           YLYKYNVFQIAF+  A LTFVYY  FGWRR++P +GRFQL+
Sbjct: 360 YLYKYNVFQIAFVVLAGLTFVYYAAFGWRRKKP-SGRFQLS 399


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