BLASTX nr result
ID: Dioscorea21_contig00018517
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00018517 (216 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002510410.1| rer1 protein, putative [Ricinus communis] gi... 137 9e-31 ref|XP_002282050.1| PREDICTED: protein RER1B [Vitis vinifera] gi... 137 9e-31 ref|XP_002300762.1| predicted protein [Populus trichocarpa] gi|2... 136 2e-30 gb|ABK92712.1| unknown [Populus trichocarpa] 136 2e-30 ref|XP_004152693.1| PREDICTED: protein RER1B-like [Cucumis sativ... 134 6e-30 >ref|XP_002510410.1| rer1 protein, putative [Ricinus communis] gi|223551111|gb|EEF52597.1| rer1 protein, putative [Ricinus communis] Length = 194 Score = 137 bits (345), Expect = 9e-31 Identities = 64/71 (90%), Positives = 69/71 (97%) Frame = +3 Query: 3 VSYGLGIYVLNLLIGFLSPMVDPEVEVLEGASLPTRGSDEFKPFIRRLPEFKFWYSITKA 182 VSYGLGIY+LNLLIGFLSP VDPE+EVL+GASLPT+GSDEFKPFIRRLPEFKFWYSITKA Sbjct: 64 VSYGLGIYILNLLIGFLSPKVDPELEVLDGASLPTKGSDEFKPFIRRLPEFKFWYSITKA 123 Query: 183 LCVAFVMTFFS 215 CVAF+MTFFS Sbjct: 124 FCVAFLMTFFS 134 >ref|XP_002282050.1| PREDICTED: protein RER1B [Vitis vinifera] gi|302142515|emb|CBI19718.3| unnamed protein product [Vitis vinifera] Length = 194 Score = 137 bits (345), Expect = 9e-31 Identities = 64/71 (90%), Positives = 69/71 (97%) Frame = +3 Query: 3 VSYGLGIYVLNLLIGFLSPMVDPEVEVLEGASLPTRGSDEFKPFIRRLPEFKFWYSITKA 182 VSYGLGIY+LNLLIGFLSP VDPE+EVL+GASLPT+GSDEFKPFIRRLPEFKFWYSITKA Sbjct: 64 VSYGLGIYILNLLIGFLSPKVDPELEVLDGASLPTKGSDEFKPFIRRLPEFKFWYSITKA 123 Query: 183 LCVAFVMTFFS 215 CVAF+MTFFS Sbjct: 124 FCVAFLMTFFS 134 >ref|XP_002300762.1| predicted protein [Populus trichocarpa] gi|222842488|gb|EEE80035.1| predicted protein [Populus trichocarpa] Length = 194 Score = 136 bits (342), Expect = 2e-30 Identities = 63/71 (88%), Positives = 69/71 (97%) Frame = +3 Query: 3 VSYGLGIYVLNLLIGFLSPMVDPEVEVLEGASLPTRGSDEFKPFIRRLPEFKFWYSITKA 182 VSYGLGIY+LNLLIGFLSP VDPE+EVL+GASLPT+GSDEFKPFIRRLPEFKFWY+ITKA Sbjct: 64 VSYGLGIYILNLLIGFLSPKVDPELEVLDGASLPTKGSDEFKPFIRRLPEFKFWYAITKA 123 Query: 183 LCVAFVMTFFS 215 CVAF+MTFFS Sbjct: 124 FCVAFLMTFFS 134 >gb|ABK92712.1| unknown [Populus trichocarpa] Length = 157 Score = 136 bits (342), Expect = 2e-30 Identities = 63/71 (88%), Positives = 69/71 (97%) Frame = +3 Query: 3 VSYGLGIYVLNLLIGFLSPMVDPEVEVLEGASLPTRGSDEFKPFIRRLPEFKFWYSITKA 182 VSYGLGIY+LNLLIGFLSP VDPE+EVL+GASLPT+GSDEFKPFIRRLPEFKFWY+ITKA Sbjct: 27 VSYGLGIYILNLLIGFLSPKVDPELEVLDGASLPTKGSDEFKPFIRRLPEFKFWYAITKA 86 Query: 183 LCVAFVMTFFS 215 CVAF+MTFFS Sbjct: 87 FCVAFLMTFFS 97 >ref|XP_004152693.1| PREDICTED: protein RER1B-like [Cucumis sativus] gi|449496096|ref|XP_004160038.1| PREDICTED: protein RER1B-like [Cucumis sativus] Length = 194 Score = 134 bits (338), Expect = 6e-30 Identities = 61/71 (85%), Positives = 69/71 (97%) Frame = +3 Query: 3 VSYGLGIYVLNLLIGFLSPMVDPEVEVLEGASLPTRGSDEFKPFIRRLPEFKFWYSITKA 182 VSYGLGIY+LNLLIGFLSP VDPE++VL+GASLPT+GSDEFKPFIRRLPEFKFWY+ITKA Sbjct: 64 VSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFKPFIRRLPEFKFWYAITKA 123 Query: 183 LCVAFVMTFFS 215 C+AF+MTFFS Sbjct: 124 FCIAFLMTFFS 134