BLASTX nr result

ID: Dioscorea21_contig00018517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018517
         (216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510410.1| rer1 protein, putative [Ricinus communis] gi...   137   9e-31
ref|XP_002282050.1| PREDICTED: protein RER1B [Vitis vinifera] gi...   137   9e-31
ref|XP_002300762.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
gb|ABK92712.1| unknown [Populus trichocarpa]                          136   2e-30
ref|XP_004152693.1| PREDICTED: protein RER1B-like [Cucumis sativ...   134   6e-30

>ref|XP_002510410.1| rer1 protein, putative [Ricinus communis]
           gi|223551111|gb|EEF52597.1| rer1 protein, putative
           [Ricinus communis]
          Length = 194

 Score =  137 bits (345), Expect = 9e-31
 Identities = 64/71 (90%), Positives = 69/71 (97%)
 Frame = +3

Query: 3   VSYGLGIYVLNLLIGFLSPMVDPEVEVLEGASLPTRGSDEFKPFIRRLPEFKFWYSITKA 182
           VSYGLGIY+LNLLIGFLSP VDPE+EVL+GASLPT+GSDEFKPFIRRLPEFKFWYSITKA
Sbjct: 64  VSYGLGIYILNLLIGFLSPKVDPELEVLDGASLPTKGSDEFKPFIRRLPEFKFWYSITKA 123

Query: 183 LCVAFVMTFFS 215
            CVAF+MTFFS
Sbjct: 124 FCVAFLMTFFS 134


>ref|XP_002282050.1| PREDICTED: protein RER1B [Vitis vinifera]
           gi|302142515|emb|CBI19718.3| unnamed protein product
           [Vitis vinifera]
          Length = 194

 Score =  137 bits (345), Expect = 9e-31
 Identities = 64/71 (90%), Positives = 69/71 (97%)
 Frame = +3

Query: 3   VSYGLGIYVLNLLIGFLSPMVDPEVEVLEGASLPTRGSDEFKPFIRRLPEFKFWYSITKA 182
           VSYGLGIY+LNLLIGFLSP VDPE+EVL+GASLPT+GSDEFKPFIRRLPEFKFWYSITKA
Sbjct: 64  VSYGLGIYILNLLIGFLSPKVDPELEVLDGASLPTKGSDEFKPFIRRLPEFKFWYSITKA 123

Query: 183 LCVAFVMTFFS 215
            CVAF+MTFFS
Sbjct: 124 FCVAFLMTFFS 134


>ref|XP_002300762.1| predicted protein [Populus trichocarpa] gi|222842488|gb|EEE80035.1|
           predicted protein [Populus trichocarpa]
          Length = 194

 Score =  136 bits (342), Expect = 2e-30
 Identities = 63/71 (88%), Positives = 69/71 (97%)
 Frame = +3

Query: 3   VSYGLGIYVLNLLIGFLSPMVDPEVEVLEGASLPTRGSDEFKPFIRRLPEFKFWYSITKA 182
           VSYGLGIY+LNLLIGFLSP VDPE+EVL+GASLPT+GSDEFKPFIRRLPEFKFWY+ITKA
Sbjct: 64  VSYGLGIYILNLLIGFLSPKVDPELEVLDGASLPTKGSDEFKPFIRRLPEFKFWYAITKA 123

Query: 183 LCVAFVMTFFS 215
            CVAF+MTFFS
Sbjct: 124 FCVAFLMTFFS 134


>gb|ABK92712.1| unknown [Populus trichocarpa]
          Length = 157

 Score =  136 bits (342), Expect = 2e-30
 Identities = 63/71 (88%), Positives = 69/71 (97%)
 Frame = +3

Query: 3   VSYGLGIYVLNLLIGFLSPMVDPEVEVLEGASLPTRGSDEFKPFIRRLPEFKFWYSITKA 182
           VSYGLGIY+LNLLIGFLSP VDPE+EVL+GASLPT+GSDEFKPFIRRLPEFKFWY+ITKA
Sbjct: 27  VSYGLGIYILNLLIGFLSPKVDPELEVLDGASLPTKGSDEFKPFIRRLPEFKFWYAITKA 86

Query: 183 LCVAFVMTFFS 215
            CVAF+MTFFS
Sbjct: 87  FCVAFLMTFFS 97


>ref|XP_004152693.1| PREDICTED: protein RER1B-like [Cucumis sativus]
           gi|449496096|ref|XP_004160038.1| PREDICTED: protein
           RER1B-like [Cucumis sativus]
          Length = 194

 Score =  134 bits (338), Expect = 6e-30
 Identities = 61/71 (85%), Positives = 69/71 (97%)
 Frame = +3

Query: 3   VSYGLGIYVLNLLIGFLSPMVDPEVEVLEGASLPTRGSDEFKPFIRRLPEFKFWYSITKA 182
           VSYGLGIY+LNLLIGFLSP VDPE++VL+GASLPT+GSDEFKPFIRRLPEFKFWY+ITKA
Sbjct: 64  VSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFKPFIRRLPEFKFWYAITKA 123

Query: 183 LCVAFVMTFFS 215
            C+AF+MTFFS
Sbjct: 124 FCIAFLMTFFS 134


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