BLASTX nr result

ID: Dioscorea21_contig00018361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018361
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527806.1| clathrin assembly protein, putative [Ricinus...   152   4e-35
ref|XP_002437410.1| hypothetical protein SORBIDRAFT_10g026380 [S...   151   5e-35
ref|XP_003570997.1| PREDICTED: LOW QUALITY PROTEIN: putative cla...   149   2e-34
ref|NP_001151036.1| clathrin assembly protein [Zea mays] gi|1956...   149   2e-34
gb|AFW76126.1| clathrin assembly protein [Zea mays]                   149   2e-34

>ref|XP_002527806.1| clathrin assembly protein, putative [Ricinus communis]
           gi|223532802|gb|EEF34578.1| clathrin assembly protein,
           putative [Ricinus communis]
          Length = 566

 Score =  152 bits (383), Expect = 4e-35
 Identities = 87/139 (62%), Positives = 99/139 (71%), Gaps = 16/139 (11%)
 Frame = -2

Query: 435 GDLLGLDEINPMAAELEQSNALDLAIIQPGDEPSSTRTGGLFGSET---NSSGWELALVT 265
           GDLLGL+EINP A E+EQ+NAL LAI+ P D+P S+    L  SE    N+ GWELALVT
Sbjct: 378 GDLLGLNEINPKAIEIEQNNALALAIVPPSDDPLSSSNRAL--SELCGPNAIGWELALVT 435

Query: 264 APSSNTSHVVESKLAGGFDKLLLDSLYEDATRRQQI------------AAANPF-QAQDP 124
             S+NTSHVV+SKLAGGFD+LLLDSLYED   R+QI               NPF Q QDP
Sbjct: 436 TSSNNTSHVVDSKLAGGFDRLLLDSLYEDDVARRQIQLQNAGYGHNGMVVQNPFEQLQDP 495

Query: 123 FAMSNNIAPPPNVQMAIMA 67
           F MSNNIAPPP+VQMAIMA
Sbjct: 496 FVMSNNIAPPPSVQMAIMA 514


>ref|XP_002437410.1| hypothetical protein SORBIDRAFT_10g026380 [Sorghum bicolor]
           gi|241915633|gb|EER88777.1| hypothetical protein
           SORBIDRAFT_10g026380 [Sorghum bicolor]
          Length = 279

 Score =  151 bits (382), Expect = 5e-35
 Identities = 84/139 (60%), Positives = 102/139 (73%), Gaps = 10/139 (7%)
 Frame = -2

Query: 453 PQPE-TIGDLLGLDE-INPMAAELEQSNALDLAIIQPGDEPSSTRTGGLFGSETNSSGWE 280
           PQP  T GDLL LDE +NPM A+LE+SNAL LAI+ PG+E   + +  LF  +   +GWE
Sbjct: 68  PQPRATTGDLLNLDEEVNPMIADLEESNALALAIVAPGNENKMSNSRDLFALD--KAGWE 125

Query: 279 LALVTAPSSNTSHVVESKLAGGFDKLLLDSLYEDATRRQQIA--------AANPFQAQDP 124
           LALVTAPS++T+  V+++LAGGFDKLLLDSLYED  RRQQIA        AANPF   DP
Sbjct: 126 LALVTAPSNHTNQQVDNQLAGGFDKLLLDSLYEDEARRQQIASVTYTGSLAANPFATSDP 185

Query: 123 FAMSNNIAPPPNVQMAIMA 67
           FA SN+ APP NVQ+A+MA
Sbjct: 186 FATSNSFAPPSNVQLAMMA 204


>ref|XP_003570997.1| PREDICTED: LOW QUALITY PROTEIN: putative clathrin assembly protein
           At4g25940-like [Brachypodium distachyon]
          Length = 484

 Score =  149 bits (377), Expect = 2e-34
 Identities = 84/141 (59%), Positives = 99/141 (70%), Gaps = 11/141 (7%)
 Frame = -2

Query: 462 EAAPQP-ETIGDLLGLDE-INPMAAELEQSNALDLAIIQPGDEPSSTRTGGLFGSETNSS 289
           E  PQP +T GDLL LDE +NP+  ELE+ NAL LAII PGD    +    LF    N+S
Sbjct: 280 EQQPQPLQTTGDLLNLDEEVNPLVTELEEHNALALAIIGPGDHSKPSTCQDLFSC--NTS 337

Query: 288 GWELALVTAPSSNTSHVVESKLAGGFDKLLLDSLYEDATRRQQIAA---------ANPFQ 136
           GWELALVTAPSS+TS  VE+K+AGGFDKLLL+SLYED  RRQQIA+         ANPF+
Sbjct: 338 GWELALVTAPSSHTSRAVETKMAGGFDKLLLNSLYEDGARRQQIASMTYNGSLGQANPFE 397

Query: 135 AQDPFAMSNNIAPPPNVQMAI 73
             DPFAMS + APP  VQ+A+
Sbjct: 398 TNDPFAMSYSFAPPSTVQLAM 418


>ref|NP_001151036.1| clathrin assembly protein [Zea mays] gi|195643820|gb|ACG41378.1|
           clathrin assembly protein [Zea mays]
          Length = 575

 Score =  149 bits (377), Expect = 2e-34
 Identities = 84/139 (60%), Positives = 101/139 (72%), Gaps = 10/139 (7%)
 Frame = -2

Query: 453 PQPE-TIGDLLGLDE-INPMAAELEQSNALDLAIIQPGDEPSSTRTGGLFGSETNSSGWE 280
           PQP  T G+LL LDE +NPM A+LE SNAL LAI+ PG+E     +  LF  +   +GWE
Sbjct: 369 PQPRATTGNLLNLDEEVNPMIADLEASNALALAIVAPGNENKMATSQDLFALD--KTGWE 426

Query: 279 LALVTAPSSNTSHVVESKLAGGFDKLLLDSLYEDATRRQQIA--------AANPFQAQDP 124
           LALVTAPS++T+  V+++LAGGFDKLLLDSLYED  RRQQIA        AANPF   DP
Sbjct: 427 LALVTAPSNHTNQQVDNQLAGGFDKLLLDSLYEDEARRQQIASVTYTGSTAANPFDHNDP 486

Query: 123 FAMSNNIAPPPNVQMAIMA 67
           FAMSN+ APP NVQ+A+MA
Sbjct: 487 FAMSNSFAPPSNVQLAMMA 505


>gb|AFW76126.1| clathrin assembly protein [Zea mays]
          Length = 575

 Score =  149 bits (376), Expect = 2e-34
 Identities = 84/139 (60%), Positives = 101/139 (72%), Gaps = 10/139 (7%)
 Frame = -2

Query: 453 PQPE-TIGDLLGLDE-INPMAAELEQSNALDLAIIQPGDEPSSTRTGGLFGSETNSSGWE 280
           PQP  T G+LL LDE +NPM A+LE SNAL LAI+ PG+E     +  LF  +   +GWE
Sbjct: 369 PQPRATTGNLLNLDEEVNPMIADLETSNALALAIVAPGNENKMPTSQDLFALD--KAGWE 426

Query: 279 LALVTAPSSNTSHVVESKLAGGFDKLLLDSLYEDATRRQQIA--------AANPFQAQDP 124
           LALVTAPS++T+  V+++LAGGFDKLLLDSLYED  RRQQIA        AANPF   DP
Sbjct: 427 LALVTAPSNHTNQQVDNQLAGGFDKLLLDSLYEDEARRQQIASVTYTGSTAANPFDHNDP 486

Query: 123 FAMSNNIAPPPNVQMAIMA 67
           FAMSN+ APP NVQ+A+MA
Sbjct: 487 FAMSNSFAPPSNVQLAMMA 505


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