BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018240
         (1314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_194849.3| DNA topoisomerase, type IA, core [Arabidopsis t...   249   1e-63
emb|CAN67233.1| hypothetical protein VITISV_020021 [Vitis vinifera]   248   2e-63
ref|XP_002528003.1| prokaryotic DNA topoisomerase, putative [Ric...   248   2e-63
ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis v...   247   4e-63
emb|CBI20809.3| unnamed protein product [Vitis vinifera]              246   9e-63

>ref|NP_194849.3| DNA topoisomerase, type IA, core [Arabidopsis thaliana]
           gi|332660478|gb|AEE85878.1| DNA topoisomerase, type IA,
           core [Arabidopsis thaliana]
          Length = 1284

 Score =  249 bits (636), Expect = 1e-63
 Identities = 121/158 (76%), Positives = 141/158 (89%)
 Frame = -2

Query: 476 KTTTQVLPTEGSNKRKGKLKPLYPPSGRSVMVVESLTKAKVIQNYLGDMYEVLPSYGHVR 297
           K   Q +     ++ +   KPLYPPSG+SV+VVES+TKAK+IQ YLGDMYEVLPSYGH+R
Sbjct: 447 KLVPQHMKNSIEHRGQNASKPLYPPSGKSVIVVESMTKAKIIQGYLGDMYEVLPSYGHIR 506

Query: 296 DLAGRSRSVRPDDDFSMVWEVPASAWTHLKSIKVALSGAENLVLASDPDREGEAIAWHII 117
           DLA RS SVRPDDDFSMVWEVP+SAWTH+KSIKVAL+GAENL+LASDPDREGEAIAWHII
Sbjct: 507 DLATRSGSVRPDDDFSMVWEVPSSAWTHIKSIKVALNGAENLILASDPDREGEAIAWHII 566

Query: 116 EMLQQQDALNENITVSRVVFHEITESSIKSALQAPREL 3
           EMLQQQ AL+E++TV+RVVFHEITES+IKSALQ+PRE+
Sbjct: 567 EMLQQQGALHESMTVARVVFHEITESAIKSALQSPREI 604


>emb|CAN67233.1| hypothetical protein VITISV_020021 [Vitis vinifera]
          Length = 1039

 Score =  248 bits (634), Expect = 2e-63
 Identities = 154/346 (44%), Positives = 198/346 (57%), Gaps = 31/346 (8%)
 Frame = -2

Query: 947  RYPFKARSREVGDS----VVLQEGKENSLNEGHLDARKQGEPVVAGSSLNELLDVVDTKP 780
            R  F    R  G +    V     + ++L++G +   +Q + V  G    +L   + T P
Sbjct: 187  RRSFNGAVRAAGSNQPTKVSSSSSRRSALSDGDM-MTQQEQLVDNGRKDVDLSPSISTSP 245

Query: 779  LSTRKSPAKTNGKPERRKVDVGESGRKSVQDEXXXXXXXXXXXXTEAAKALVEENQLAIS 600
            +S     +K   K  +      +S  K  +++             ++ K+  E N+  I+
Sbjct: 246  VSNNNRGSKATEKQRK------QSRTKKNKEQVTSTDASSDVAQKKSTKSSSEANKSNIT 299

Query: 599  EEKNSEQSGTSSPSLVVEXXXXXXXXXXXXXATAVDAFHVAKTTTQVLPTEGSNKRKGK- 423
            ++  S Q+       +                 A+D+     T +Q     GS+ +KGK 
Sbjct: 300  KKSQSPQASKVRHVSICIYELFQNNSTGNKPVEALDSS--VSTKSQSKKATGSSNKKGKS 357

Query: 422  --------------------------LKPLYPPSGRSVMVVESLTKAKVIQNYLGDMYEV 321
                                      LK LYP SG+SV+VVES+TKAKVIQ YLGDMYEV
Sbjct: 358  PKVANESPKKQTVHTMGKIKSLEQRPLKKLYPSSGKSVVVVESVTKAKVIQGYLGDMYEV 417

Query: 320  LPSYGHVRDLAGRSRSVRPDDDFSMVWEVPASAWTHLKSIKVALSGAENLVLASDPDREG 141
            LPSYGHVRDLAGRS SVRPDDDFSMVWEVP++AWTHLKSIKVAL GAENL+LASDPDREG
Sbjct: 418  LPSYGHVRDLAGRSGSVRPDDDFSMVWEVPSAAWTHLKSIKVALGGAENLILASDPDREG 477

Query: 140  EAIAWHIIEMLQQQDALNENITVSRVVFHEITESSIKSALQAPREL 3
            EAIAWHIIEML QQDAL++++TV+RVVFHEITESSIKSAL APRE+
Sbjct: 478  EAIAWHIIEMLLQQDALHKDLTVARVVFHEITESSIKSALDAPREI 523


>ref|XP_002528003.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
           gi|223532629|gb|EEF34415.1| prokaryotic DNA
           topoisomerase, putative [Ricinus communis]
          Length = 1071

 Score =  248 bits (633), Expect = 2e-63
 Identities = 120/144 (83%), Positives = 135/144 (93%)
 Frame = -2

Query: 434 RKGKLKPLYPPSGRSVMVVESLTKAKVIQNYLGDMYEVLPSYGHVRDLAGRSRSVRPDDD 255
           R+G LKPLYPP+ +SV+VVES+TKAKVIQ YLG M+EVLPSYGHVRDLA RS SVRPDDD
Sbjct: 276 RQGSLKPLYPPTAKSVVVVESVTKAKVIQGYLGPMFEVLPSYGHVRDLAARSGSVRPDDD 335

Query: 254 FSMVWEVPASAWTHLKSIKVALSGAENLVLASDPDREGEAIAWHIIEMLQQQDALNENIT 75
           FSMVWEVP+ AWTHLK+IKVAL+GAENLVLASDPDREGEAIAWHIIEMLQQQDAL++ +T
Sbjct: 336 FSMVWEVPSPAWTHLKTIKVALNGAENLVLASDPDREGEAIAWHIIEMLQQQDALHQGVT 395

Query: 74  VSRVVFHEITESSIKSALQAPREL 3
           V+RVVFHEITE SIK+ALQAPRE+
Sbjct: 396 VARVVFHEITEQSIKNALQAPREI 419


>ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
          Length = 1185

 Score =  247 bits (631), Expect = 4e-63
 Identities = 154/346 (44%), Positives = 199/346 (57%), Gaps = 31/346 (8%)
 Frame = -2

Query: 947  RYPFKARSREVGDS----VVLQEGKENSLNEGHLDARKQGEPVVAGSSLNELLDVVDTKP 780
            R  F    R  G +    V     + ++L +G +   +Q + V  G    +L   + T P
Sbjct: 187  RRSFNGAVRAAGSNQPTKVSSSSSRRSALGDGDM-MTQQEQLVDNGRKDADLSPSISTSP 245

Query: 779  LSTRKSPAKTNGKPERRKVDVGESGRKSVQDEXXXXXXXXXXXXTEAAKALVEENQLAIS 600
            +S     +K   K  +      +S  K  +++             ++ K+  E N+  I+
Sbjct: 246  VSNNNRGSKATEKQRK------QSRTKKNKEQVTSTDASSDVAQKKSTKSSSEANKSNIT 299

Query: 599  EEKNSEQSGTSSPSLVVEXXXXXXXXXXXXXATAVDAFHVAKTTTQVLPTEGSNKRKGK- 423
            ++  S Q+  ++ +                   A+D+     T +Q     GS+ +KGK 
Sbjct: 300  KKSQSPQASKNNST-------------GNKPVEALDSS--VSTKSQSKKATGSSNKKGKS 344

Query: 422  --------------------------LKPLYPPSGRSVMVVESLTKAKVIQNYLGDMYEV 321
                                      LK LYP SG+SV+VVES+TKAKVIQ YLGDMYEV
Sbjct: 345  PKVANESPKKQTVHTMGKIKSLEQRPLKKLYPSSGKSVVVVESVTKAKVIQGYLGDMYEV 404

Query: 320  LPSYGHVRDLAGRSRSVRPDDDFSMVWEVPASAWTHLKSIKVALSGAENLVLASDPDREG 141
            LPSYGHVRDLAGRS SVRPDDDFSMVWEVP++AWTHLKSIKVAL GAENL+LASDPDREG
Sbjct: 405  LPSYGHVRDLAGRSGSVRPDDDFSMVWEVPSAAWTHLKSIKVALGGAENLILASDPDREG 464

Query: 140  EAIAWHIIEMLQQQDALNENITVSRVVFHEITESSIKSALQAPREL 3
            EAIAWHIIEML QQDAL++++TV+RVVFHEITESSIKSAL APRE+
Sbjct: 465  EAIAWHIIEMLLQQDALHKDLTVARVVFHEITESSIKSALDAPREI 510


>emb|CBI20809.3| unnamed protein product [Vitis vinifera]
          Length = 1035

 Score =  246 bits (628), Expect = 9e-63
 Identities = 121/140 (86%), Positives = 133/140 (95%)
 Frame = -2

Query: 422 LKPLYPPSGRSVMVVESLTKAKVIQNYLGDMYEVLPSYGHVRDLAGRSRSVRPDDDFSMV 243
           LK LYP SG+SV+VVES+TKAKVIQ YLGDMYEVLPSYGHVRDLAGRS SVRPDDDFSMV
Sbjct: 85  LKKLYPSSGKSVVVVESVTKAKVIQGYLGDMYEVLPSYGHVRDLAGRSGSVRPDDDFSMV 144

Query: 242 WEVPASAWTHLKSIKVALSGAENLVLASDPDREGEAIAWHIIEMLQQQDALNENITVSRV 63
           WEVP++AWTHLKSIKVAL GAENL+LASDPDREGEAIAWHIIEML QQDAL++++TV+RV
Sbjct: 145 WEVPSAAWTHLKSIKVALGGAENLILASDPDREGEAIAWHIIEMLLQQDALHKDLTVARV 204

Query: 62  VFHEITESSIKSALQAPREL 3
           VFHEITESSIKSAL APRE+
Sbjct: 205 VFHEITESSIKSALDAPREI 224