BLASTX nr result

ID: Dioscorea21_contig00018195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018195
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519868.1| PREDICTED: DNA-(apurinic or apyrimidinic sit...   114   6e-24
ref|XP_003629318.1| DNA-(apurinic or apyrimidinic site) lyase [M...   110   9e-23
ref|XP_004134861.1| PREDICTED: DNA-(apurinic or apyrimidinic sit...   110   1e-22
ref|XP_002521656.1| ap endonuclease, putative [Ricinus communis]...   109   3e-22
ref|XP_003548849.1| PREDICTED: LOW QUALITY PROTEIN: DNA-(apurini...   107   8e-22

>ref|XP_003519868.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like
           [Glycine max]
          Length = 622

 Score =  114 bits (286), Expect = 6e-24
 Identities = 49/61 (80%), Positives = 55/61 (90%)
 Frame = +3

Query: 3   MKMSIPLCKGHKEPCVARCVKKEGPNIGRRFYVCARATGPASNPEANCGYFEWASVKSKR 182
           M+ SIP+CKGHKEPC+AR VKK+GPN GRRFYVCARA GPASNPEANCGYF+WAS KS+ 
Sbjct: 562 MQNSIPICKGHKEPCIARVVKKQGPNFGRRFYVCARAEGPASNPEANCGYFKWASSKSRN 621

Query: 183 K 185
           K
Sbjct: 622 K 622


>ref|XP_003629318.1| DNA-(apurinic or apyrimidinic site) lyase [Medicago truncatula]
           gi|355523340|gb|AET03794.1| DNA-(apurinic or
           apyrimidinic site) lyase [Medicago truncatula]
          Length = 613

 Score =  110 bits (276), Expect = 9e-23
 Identities = 48/61 (78%), Positives = 53/61 (86%)
 Frame = +3

Query: 3   MKMSIPLCKGHKEPCVARCVKKEGPNIGRRFYVCARATGPASNPEANCGYFEWASVKSKR 182
           M+ SIPLCKGHKEPC+AR VKK+G N GRRFY CARA GPASNPEANCGYF+WA+ KSK 
Sbjct: 553 MQNSIPLCKGHKEPCIARVVKKQGANFGRRFYTCARAEGPASNPEANCGYFKWATSKSKN 612

Query: 183 K 185
           K
Sbjct: 613 K 613


>ref|XP_004134861.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like
           [Cucumis sativus] gi|449491354|ref|XP_004158869.1|
           PREDICTED: DNA-(apurinic or apyrimidinic site) lyase
           2-like [Cucumis sativus]
          Length = 611

 Score =  110 bits (275), Expect = 1e-22
 Identities = 49/61 (80%), Positives = 54/61 (88%)
 Frame = +3

Query: 3   MKMSIPLCKGHKEPCVARCVKKEGPNIGRRFYVCARATGPASNPEANCGYFEWASVKSKR 182
           M+ SIPLCKGHKE CVAR VKK+GPN GRRFYVCARA GPASNPEANCGYF+WA+ KS+ 
Sbjct: 551 MQNSIPLCKGHKETCVARVVKKQGPNNGRRFYVCARAEGPASNPEANCGYFKWAASKSRH 610

Query: 183 K 185
           K
Sbjct: 611 K 611


>ref|XP_002521656.1| ap endonuclease, putative [Ricinus communis]
           gi|223539047|gb|EEF40643.1| ap endonuclease, putative
           [Ricinus communis]
          Length = 586

 Score =  109 bits (272), Expect = 3e-22
 Identities = 48/61 (78%), Positives = 53/61 (86%)
 Frame = +3

Query: 3   MKMSIPLCKGHKEPCVARCVKKEGPNIGRRFYVCARATGPASNPEANCGYFEWASVKSKR 182
           M+ SIPLCKGHKEPCV+R VKK GP  G RFYVCARA GPASNPEANCGYF+WAS KS++
Sbjct: 526 MQNSIPLCKGHKEPCVSRIVKKPGPTCGHRFYVCARAEGPASNPEANCGYFKWASSKSRQ 585

Query: 183 K 185
           K
Sbjct: 586 K 586


>ref|XP_003548849.1| PREDICTED: LOW QUALITY PROTEIN: DNA-(apurinic or apyrimidinic site)
           lyase 2-like [Glycine max]
          Length = 566

 Score =  107 bits (268), Expect = 8e-22
 Identities = 47/61 (77%), Positives = 53/61 (86%)
 Frame = +3

Query: 3   MKMSIPLCKGHKEPCVARCVKKEGPNIGRRFYVCARATGPASNPEANCGYFEWASVKSKR 182
           M+ SIP+CKG+KEPC+AR VKK+GPN GRRFYVCA A GPASN EANCGYF+WAS KSK 
Sbjct: 506 MQNSIPICKGYKEPCIARVVKKQGPNFGRRFYVCAHAEGPASNLEANCGYFKWASSKSKN 565

Query: 183 K 185
           K
Sbjct: 566 K 566


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