BLASTX nr result

ID: Dioscorea21_contig00017858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017858
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003574955.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...    83   3e-14
ref|XP_002275228.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...    80   2e-13
gb|AFK35550.1| unknown [Medicago truncatula]                           78   9e-13
ref|XP_002299367.1| predicted protein [Populus trichocarpa] gi|1...    78   9e-13
gb|AFK46939.1| unknown [Lotus japonicus]                               77   1e-12

>ref|XP_003574955.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 2-like [Brachypodium distachyon]
          Length = 96

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 38/49 (77%), Positives = 44/49 (89%)
 Frame = +1

Query: 112 MAWRSHLSRNLKELRFLFCQTSPASAFTREFVQKNYADLKRLNPKLPIL 258
           MAWRS+LSR +KELRFLFCQ+SPASA TR+FVQKNY ++K LNP LPIL
Sbjct: 1   MAWRSNLSRGVKELRFLFCQSSPASAATRDFVQKNYGEIKSLNPALPIL 49


>ref|XP_002275228.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 2 isoform 1 [Vitis vinifera]
           gi|359473851|ref|XP_003631368.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2
           isoform 2 [Vitis vinifera] gi|296085568|emb|CBI29300.3|
           unnamed protein product [Vitis vinifera]
          Length = 98

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 37/49 (75%), Positives = 40/49 (81%)
 Frame = +1

Query: 112 MAWRSHLSRNLKELRFLFCQTSPASAFTREFVQKNYADLKRLNPKLPIL 258
           MAWR  LSRNLKELR LFCQTSPAS+  R FV++NY DLK LNPK PIL
Sbjct: 1   MAWRGQLSRNLKELRILFCQTSPASSSARAFVERNYKDLKTLNPKFPIL 49


>gb|AFK35550.1| unknown [Medicago truncatula]
          Length = 98

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 35/49 (71%), Positives = 42/49 (85%)
 Frame = +1

Query: 112 MAWRSHLSRNLKELRFLFCQTSPASAFTREFVQKNYADLKRLNPKLPIL 258
           MAWR +LS+N+KELRFL CQ+SPAS+  R FV+KNY +LK LNPKLPIL
Sbjct: 1   MAWRGNLSKNIKELRFLMCQSSPASSSARAFVEKNYKELKTLNPKLPIL 49


>ref|XP_002299367.1| predicted protein [Populus trichocarpa] gi|118481598|gb|ABK92741.1|
           unknown [Populus trichocarpa]
           gi|118488952|gb|ABK96284.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|222846625|gb|EEE84172.1|
           predicted protein [Populus trichocarpa]
          Length = 98

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 35/49 (71%), Positives = 41/49 (83%)
 Frame = +1

Query: 112 MAWRSHLSRNLKELRFLFCQTSPASAFTREFVQKNYADLKRLNPKLPIL 258
           MAWR  LS+NLKELR L CQ+SP+S+ TR F++KNY DLK LNPKLPIL
Sbjct: 1   MAWRGQLSKNLKELRILLCQSSPSSSSTRTFIEKNYKDLKTLNPKLPIL 49


>gb|AFK46939.1| unknown [Lotus japonicus]
          Length = 98

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 34/49 (69%), Positives = 41/49 (83%)
 Frame = +1

Query: 112 MAWRSHLSRNLKELRFLFCQTSPASAFTREFVQKNYADLKRLNPKLPIL 258
           MAWR H+S+N+KELR L CQ+SPAS+  R FV+KNY +LK LNPKLPIL
Sbjct: 1   MAWRGHISKNIKELRILMCQSSPASSSARAFVEKNYKELKTLNPKLPIL 49


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