BLASTX nr result
ID: Dioscorea21_contig00017858
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00017858 (260 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003574955.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1... 83 3e-14 ref|XP_002275228.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1... 80 2e-13 gb|AFK35550.1| unknown [Medicago truncatula] 78 9e-13 ref|XP_002299367.1| predicted protein [Populus trichocarpa] gi|1... 78 9e-13 gb|AFK46939.1| unknown [Lotus japonicus] 77 1e-12 >ref|XP_003574955.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Brachypodium distachyon] Length = 96 Score = 82.8 bits (203), Expect = 3e-14 Identities = 38/49 (77%), Positives = 44/49 (89%) Frame = +1 Query: 112 MAWRSHLSRNLKELRFLFCQTSPASAFTREFVQKNYADLKRLNPKLPIL 258 MAWRS+LSR +KELRFLFCQ+SPASA TR+FVQKNY ++K LNP LPIL Sbjct: 1 MAWRSNLSRGVKELRFLFCQSSPASAATRDFVQKNYGEIKSLNPALPIL 49 >ref|XP_002275228.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 isoform 1 [Vitis vinifera] gi|359473851|ref|XP_003631368.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 isoform 2 [Vitis vinifera] gi|296085568|emb|CBI29300.3| unnamed protein product [Vitis vinifera] Length = 98 Score = 79.7 bits (195), Expect = 2e-13 Identities = 37/49 (75%), Positives = 40/49 (81%) Frame = +1 Query: 112 MAWRSHLSRNLKELRFLFCQTSPASAFTREFVQKNYADLKRLNPKLPIL 258 MAWR LSRNLKELR LFCQTSPAS+ R FV++NY DLK LNPK PIL Sbjct: 1 MAWRGQLSRNLKELRILFCQTSPASSSARAFVERNYKDLKTLNPKFPIL 49 >gb|AFK35550.1| unknown [Medicago truncatula] Length = 98 Score = 77.8 bits (190), Expect = 9e-13 Identities = 35/49 (71%), Positives = 42/49 (85%) Frame = +1 Query: 112 MAWRSHLSRNLKELRFLFCQTSPASAFTREFVQKNYADLKRLNPKLPIL 258 MAWR +LS+N+KELRFL CQ+SPAS+ R FV+KNY +LK LNPKLPIL Sbjct: 1 MAWRGNLSKNIKELRFLMCQSSPASSSARAFVEKNYKELKTLNPKLPIL 49 >ref|XP_002299367.1| predicted protein [Populus trichocarpa] gi|118481598|gb|ABK92741.1| unknown [Populus trichocarpa] gi|118488952|gb|ABK96284.1| unknown [Populus trichocarpa x Populus deltoides] gi|222846625|gb|EEE84172.1| predicted protein [Populus trichocarpa] Length = 98 Score = 77.8 bits (190), Expect = 9e-13 Identities = 35/49 (71%), Positives = 41/49 (83%) Frame = +1 Query: 112 MAWRSHLSRNLKELRFLFCQTSPASAFTREFVQKNYADLKRLNPKLPIL 258 MAWR LS+NLKELR L CQ+SP+S+ TR F++KNY DLK LNPKLPIL Sbjct: 1 MAWRGQLSKNLKELRILLCQSSPSSSSTRTFIEKNYKDLKTLNPKLPIL 49 >gb|AFK46939.1| unknown [Lotus japonicus] Length = 98 Score = 77.4 bits (189), Expect = 1e-12 Identities = 34/49 (69%), Positives = 41/49 (83%) Frame = +1 Query: 112 MAWRSHLSRNLKELRFLFCQTSPASAFTREFVQKNYADLKRLNPKLPIL 258 MAWR H+S+N+KELR L CQ+SPAS+ R FV+KNY +LK LNPKLPIL Sbjct: 1 MAWRGHISKNIKELRILMCQSSPASSSARAFVEKNYKELKTLNPKLPIL 49