BLASTX nr result

ID: Dioscorea21_contig00017689 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017689
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635084.1| PREDICTED: INO80 complex subunit D-like [Vit...   172   3e-41
ref|XP_002263103.2| PREDICTED: INO80 complex subunit D-like [Vit...   167   1e-39
ref|XP_002529751.1| conserved hypothetical protein [Ricinus comm...   164   7e-39
ref|XP_002310446.1| predicted protein [Populus trichocarpa] gi|2...   164   9e-39
ref|XP_002334422.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37

>ref|XP_003635084.1| PREDICTED: INO80 complex subunit D-like [Vitis vinifera]
          Length = 237

 Score =  172 bits (435), Expect = 3e-41
 Identities = 80/124 (64%), Positives = 98/124 (79%)
 Frame = -1

Query: 484 VSGCKAYAMPLTRFCHSHILLDGKQTLYKACSYVIKSAQSGQIICGKPVLRAAVPSLCPI 305
           VSGCK+ AM LTRFCH HIL D KQ LYK CS+VIKS Q+G ++CGKP+LR+ VPSLCPI
Sbjct: 114 VSGCKSKAMALTRFCHPHILSDSKQKLYKGCSFVIKSVQAGPVLCGKPILRSTVPSLCPI 173

Query: 304 HFQKAQKHVSQALKKAGLNVSSSSRPAPKFHIIMAEYVRQIQAKRREALNTTIETVRDED 125
           HFQKA++ V+ ALKKAGLN +SSS+ APKFH+I+AEYV QIQ KRR A   ++  V  ++
Sbjct: 174 HFQKAERQVNNALKKAGLNAASSSKLAPKFHVIVAEYVHQIQTKRRAAQRASVNKVEIKE 233

Query: 124 EKIC 113
           E  C
Sbjct: 234 ETGC 237


>ref|XP_002263103.2| PREDICTED: INO80 complex subunit D-like [Vitis vinifera]
          Length = 248

 Score =  167 bits (422), Expect = 1e-39
 Identities = 77/116 (66%), Positives = 94/116 (81%)
 Frame = -1

Query: 484 VSGCKAYAMPLTRFCHSHILLDGKQTLYKACSYVIKSAQSGQIICGKPVLRAAVPSLCPI 305
           VSGCK+ AM LTRFCH HIL D KQ LYK CS+VIKS Q+G ++CGKP+LR+ VPSLCPI
Sbjct: 114 VSGCKSKAMALTRFCHPHILSDSKQKLYKGCSFVIKSVQAGPVLCGKPILRSTVPSLCPI 173

Query: 304 HFQKAQKHVSQALKKAGLNVSSSSRPAPKFHIIMAEYVRQIQAKRREALNTTIETV 137
           HFQKA++ V+ ALKKAGLN +SSS+ APKFH+I+AEYV QIQ KRR A   + + +
Sbjct: 174 HFQKAERQVNNALKKAGLNAASSSKLAPKFHVIVAEYVHQIQTKRRAAQRASADAM 229


>ref|XP_002529751.1| conserved hypothetical protein [Ricinus communis]
           gi|223530749|gb|EEF32617.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 314

 Score =  164 bits (415), Expect = 7e-39
 Identities = 77/104 (74%), Positives = 89/104 (85%)
 Frame = -1

Query: 478 GCKAYAMPLTRFCHSHILLDGKQTLYKACSYVIKSAQSGQIICGKPVLRAAVPSLCPIHF 299
           GCK  AM LT FCH HIL D KQ LYK C YVIKSAQ+G I CGKP+LR++ PSLC +HF
Sbjct: 191 GCKLKAMALTSFCHLHILSDAKQKLYKPCGYVIKSAQAGPITCGKPILRSSAPSLCTVHF 250

Query: 298 QKAQKHVSQALKKAGLNVSSSSRPAPKFHIIMAEYVRQIQAKRR 167
           QKAQKHV++ALKKAGLNVSSSS+ APKFH+I+AEYVRQIQA+R+
Sbjct: 251 QKAQKHVTRALKKAGLNVSSSSKLAPKFHVIVAEYVRQIQARRK 294


>ref|XP_002310446.1| predicted protein [Populus trichocarpa] gi|222853349|gb|EEE90896.1|
           predicted protein [Populus trichocarpa]
          Length = 276

 Score =  164 bits (414), Expect = 9e-39
 Identities = 77/106 (72%), Positives = 88/106 (83%)
 Frame = -1

Query: 478 GCKAYAMPLTRFCHSHILLDGKQTLYKACSYVIKSAQSGQIICGKPVLRAAVPSLCPIHF 299
           GCK  AM LT FCH HIL D KQ LYK C YVIKSAQ+G I CGKP+LR+  P+LC +HF
Sbjct: 170 GCKLKAMALTSFCHLHILSDAKQKLYKPCGYVIKSAQAGPITCGKPILRSTAPALCTVHF 229

Query: 298 QKAQKHVSQALKKAGLNVSSSSRPAPKFHIIMAEYVRQIQAKRREA 161
           QKAQKHV+QAL+KAGLNVSSSS+ APKFH+I+ EYVRQIQAKR+ A
Sbjct: 230 QKAQKHVTQALRKAGLNVSSSSKLAPKFHVIVTEYVRQIQAKRKAA 275


>ref|XP_002334422.1| predicted protein [Populus trichocarpa] gi|222870384|gb|EEF07515.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score =  160 bits (405), Expect = 1e-37
 Identities = 78/118 (66%), Positives = 90/118 (76%)
 Frame = -1

Query: 478 GCKAYAMPLTRFCHSHILLDGKQTLYKACSYVIKSAQSGQIICGKPVLRAAVPSLCPIHF 299
           GCK  AM LT FCH HIL D KQ LYK C YVIKSAQ+G I CGKP+LR+  PSLC IH 
Sbjct: 136 GCKLKAMALTSFCHLHILSDAKQKLYKPCGYVIKSAQAGPITCGKPILRSTAPSLCTIHV 195

Query: 298 QKAQKHVSQALKKAGLNVSSSSRPAPKFHIIMAEYVRQIQAKRREALNTTIETVRDED 125
           QKAQKHV+QAL+KAGLNVSSSS+ APKFH+I+ EYVRQIQ +R+ A       V D++
Sbjct: 196 QKAQKHVTQALRKAGLNVSSSSKLAPKFHVIVTEYVRQIQFRRKAAERGNRSKVMDKE 253


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