BLASTX nr result

ID: Dioscorea21_contig00017480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017480
         (1389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE57696.1| hypothetical protein OsJ_08170 [Oryza sativa Japo...   301   2e-79
dbj|BAD12870.1| bactericidal permeability-increasing protein-lik...   283   6e-74
ref|XP_002298842.1| predicted protein [Populus trichocarpa] gi|2...   275   3e-71
gb|AFW63707.1| putative RING zinc finger domain superfamily prot...   272   2e-70
gb|AFW73153.1| putative RING zinc finger domain superfamily prot...   270   5e-70

>gb|EEE57696.1| hypothetical protein OsJ_08170 [Oryza sativa Japonica Group]
          Length = 817

 Score =  301 bits (772), Expect = 2e-79
 Identities = 193/447 (43%), Positives = 245/447 (54%), Gaps = 20/447 (4%)
 Frame = -3

Query: 1300 AAQPSP-----KKRPRPPA---DDHDLKKVAEIVMVLSAMADMRAGAPPTSVEKSLVAEA 1145
            AA  SP     K+R R  A   D   L++VAEIVMVL+A  ++R G  PT+ E++L AEA
Sbjct: 4    AAAASPPASLGKRRRRGGAGGGDGEGLRRVAEIVMVLAAAGEVRGGREPTAAERALAAEA 63

Query: 1144 RDMLVKACEDA--RPRDLFSREAVRVLVEDLGLNRSRDPL-LGFRPPKMSIAEKLLLTKR 974
            R+ L     +   RP+DLF  EAVR LVEDLGLNR+RDP  +GFRPPK SIA++L+LTKR
Sbjct: 64   RERLAAVVTEGAVRPKDLFPGEAVRALVEDLGLNRARDPAAMGFRPPKASIADRLMLTKR 123

Query: 973  K------MEESKEVVSHSSANATQFQPISFHASSDGNNTLFHGAPRFLPDKPSPFPYHAG 812
            K      MEE KE     + +  Q    S  A   G    FHGAP+F    P   P  A 
Sbjct: 124  KKTAHVLMEEVKESPVQPTTSTAQTITSSGTADFQG----FHGAPKFAVGVPRNLPAVAA 179

Query: 811  GAQTASPMVAVPTVGXXXXXSKLLQMSATHPVITSAKLATSSTPFATTSHAEVTHFRLDP 632
               TA P+ +   V                P  +S   + ++    T  H   +H + D 
Sbjct: 180  LPATA-PVTSASLV-------------TLKPPGSSPVKSVNNPSVVTMPHMAPSHLKSDK 225

Query: 631  RSNGSPYLTRVRATTDCLPEKSSTLSAHSAPNPALRFGQTNK-FQDASTVKQEAVHEVNG 455
              NG P L R  AT                      +G  NK F D       A   +N 
Sbjct: 226  GVNGPPNLVRTGAT----------------------YGNLNKSFHDTC-----ARSNLNA 258

Query: 454  IQTSVPVIADQDFKGSTVQATSGNLFMGHHS--GLTYVHPPSGFPSHNDIAQIVQRTLQN 281
            +Q+S PV  +QD K +++ AT+GN   GHH+   +  V P   F +H++IA+ VQR L  
Sbjct: 259  VQSSNPVAKNQDTKTASIDATAGNPLTGHHATPSVAPVPPKPTFANHSEIAKSVQRVLHQ 318

Query: 280  KASEHSNWAPPSTEYVNKGLSCQICKVAISDVESLLVCDSCEKGTHLRCLQSYGNKGMSK 101
             A+ H +W PPSTEY+   L CQICKVAI D+ESLLVCD+CEKG HL+CLQ YGNKG+ K
Sbjct: 319  PAN-HPSWIPPSTEYMRSRLDCQICKVAIMDMESLLVCDACEKGAHLKCLQHYGNKGVPK 377

Query: 100  LEWHCPKCLISSNGKPLPPKYGRVTRS 20
             EWHCP CL  S GKPLPPKYG+VTR+
Sbjct: 378  AEWHCPTCLTKSKGKPLPPKYGKVTRT 404


>dbj|BAD12870.1| bactericidal permeability-increasing protein-like [Oryza sativa
            Japonica Group]
          Length = 864

 Score =  283 bits (725), Expect = 6e-74
 Identities = 191/490 (38%), Positives = 246/490 (50%), Gaps = 63/490 (12%)
 Frame = -3

Query: 1300 AAQPSP-----KKRPRPPA---DDHDLKKVAEIVMVLSAMADMRAGAPPTSVEKSLVAEA 1145
            AA  SP     K+R R  A   D   L++VAEIVMVL+A  ++R G  PT+ E++L AEA
Sbjct: 4    AAAASPPASLGKRRRRGGAGGGDGEGLRRVAEIVMVLAAAGEVRGGREPTAAERALAAEA 63

Query: 1144 RDMLVKACEDA--RPRDLFSREAVRVLVEDLGLNRSRDPL-LGFRPPKMSIAEKLLLTKR 974
            R+ L     +   RP+DLF  EAVR LVEDLGLNR+RDP  +GFRPPK SIA++L+LTKR
Sbjct: 64   RERLAAVVTEGAVRPKDLFPGEAVRALVEDLGLNRARDPAAMGFRPPKASIADRLMLTKR 123

Query: 973  KME--------------------------------------------ESKEVVSHSSANA 926
            K                                              + K V+       
Sbjct: 124  KHAGGVVAGADRLQHCVPVPGESMRVLLQPHSSIPGGLLHRRSCSHADGKHVLQMEEVKE 183

Query: 925  TQFQPISFHA---SSDGNNTL--FHGAPRFLPDKPSPFPYHAGGAQTASPMVAVPTVGXX 761
            +  QP +  A   +S G      FHGAP+F    P   P  A    TA P+ +   V   
Sbjct: 184  SPVQPTTSTAQTITSSGTADFQGFHGAPKFAVGVPRNLPAVAALPATA-PVTSASLV--- 239

Query: 760  XXXSKLLQMSATHPVITSAKLATSSTPFATTSHAEVTHFRLDPRSNGSPYLTRVRATTDC 581
                         P  +S   + ++    T  H   +H + D   NG P L R  AT   
Sbjct: 240  ----------TLKPPGSSPVKSVNNPSVVTMPHMAPSHLKSDKGVNGPPNLVRTGAT--- 286

Query: 580  LPEKSSTLSAHSAPNPALRFGQTNK-FQDASTVKQEAVHEVNGIQTSVPVIADQDFKGST 404
                               +G  NK F D       A   +N +Q+S PV  +QD K ++
Sbjct: 287  -------------------YGNLNKSFHDTC-----ARSNLNAVQSSNPVAKNQDTKTAS 322

Query: 403  VQATSGNLFMGHHS--GLTYVHPPSGFPSHNDIAQIVQRTLQNKASEHSNWAPPSTEYVN 230
            + AT+GN   GHH+   +  V P   F +H++IA+ VQR L   A+ H +W PPSTEY+ 
Sbjct: 323  IDATAGNPLTGHHATPSVAPVPPKPTFANHSEIAKSVQRVLHQPAN-HPSWIPPSTEYMR 381

Query: 229  KGLSCQICKVAISDVESLLVCDSCEKGTHLRCLQSYGNKGMSKLEWHCPKCLISSNGKPL 50
              L CQICKVAI D+ESLLVCD+CEKG HL+CLQ YGNKG+ K EWHCP CL  S GKPL
Sbjct: 382  SRLDCQICKVAIMDMESLLVCDACEKGAHLKCLQHYGNKGVPKAEWHCPTCLTKSKGKPL 441

Query: 49   PPKYGRVTRS 20
            PPKYG+VTR+
Sbjct: 442  PPKYGKVTRT 451


>ref|XP_002298842.1| predicted protein [Populus trichocarpa] gi|222846100|gb|EEE83647.1|
            predicted protein [Populus trichocarpa]
          Length = 798

 Score =  275 bits (702), Expect = 3e-71
 Identities = 165/424 (38%), Positives = 241/424 (56%), Gaps = 11/424 (2%)
 Frame = -3

Query: 1249 DLKKVAEIVMVLSAMADMRAGAPPTSVEKSLVAEARDMLVKACEDARPRDLFSREAVRVL 1070
            +++KVAEIV+VLSAMA MR G  PT  E  L+ EAR+ LV+ C+D  P+DL +R+++  +
Sbjct: 48   EIRKVAEIVLVLSAMAGMRGGKNPTDAEVRLMEEAREKLVEICQDLSPKDLVARDSIGTV 107

Query: 1069 VEDLGLN-RSRDPLLGFRPPKMSIAEKLLLTKRKMEESKEVVSHSSANATQFQPISFHAS 893
            +EDLGLN + +D  LGFR  ++SI EKL L+KRKMEESK+  + S+   TQ    SF A 
Sbjct: 108  IEDLGLNFKLKDQRLGFRGSRLSIKEKLSLSKRKMEESKKFAAPSATYTTQITQPSFGAM 167

Query: 892  SDGNNTLFHGAPRFLP-DKPSPFPYHAGGAQTASP---MVAVPTVGXXXXXSKLLQMSAT 725
             + +      A R LP DKPS     +G    + P     A P        +   ++SA 
Sbjct: 168  PESHGPSH--AFRVLPSDKPSNISVSSGIFPASLPGHVSAATPASSTLQPLTTEAKISAV 225

Query: 724  HPVITSAKLATSSTPFATTSHAEVTHFRLDPRSNGSPYLTRVRATTDC----LPEKSSTL 557
               + S++L    +  A  S  E T F+++  SNG+ Y  +V A        +   S ++
Sbjct: 226  SSGLPSSQLGRDLSSVAF-SKVEKTQFKVEGGSNGASYAPQVPANASANHSLVNAPSWSM 284

Query: 556  SAHSAPNPALRFGQTNKFQDASTVKQEAVHEVNGIQTSVPVIADQDFKGSTVQATSGNLF 377
              HSA +   +    N   + ++ K E V ++ G   +     DQ F+  T Q    NL 
Sbjct: 285  QPHSASSG--KSAPENNMPNHNSAKVEGVADL-GRTRATQAARDQTFRPFTPQTPPANLP 341

Query: 376  MGHH--SGLTYVHPPSGFPSHNDIAQIVQRTLQNKASEHSNWAPPSTEYVNKGLSCQICK 203
              H    G+ YV PPS   +HN+IA+IVQ+ LQ K  E+  W PPS EY+   ++CQICK
Sbjct: 342  SIHPPMQGVEYVQPPSFINNHNEIAKIVQKLLQPKLPEYPTWIPPSREYMTTAMTCQICK 401

Query: 202  VAISDVESLLVCDSCEKGTHLRCLQSYGNKGMSKLEWHCPKCLISSNGKPLPPKYGRVTR 23
            + +++VE++++CD+CE G H++C ++   KG+ + EWHC  C+  SNGKPLPPKYGRV R
Sbjct: 402  LTVNEVETVVLCDACESGFHIKCREAINQKGIPRGEWHCRNCMALSNGKPLPPKYGRVMR 461

Query: 22   SPAP 11
            S  P
Sbjct: 462  SATP 465


>gb|AFW63707.1| putative RING zinc finger domain superfamily protein [Zea mays]
          Length = 775

 Score =  272 bits (695), Expect = 2e-70
 Identities = 176/433 (40%), Positives = 230/433 (53%), Gaps = 6/433 (1%)
 Frame = -3

Query: 1300 AAQPSPKKRPRPPADDH-DLKKVAEIVMVLSAMADMRAGAPPTSVEKSLVAEARDMLVKA 1124
            AA P+   R R   DD   L++VAEIVMVL+A  ++R G  PT+ E++L AEAR+ L  A
Sbjct: 12   AASPACAARKRRRGDDSAGLRRVAEIVMVLAAAGEVRGGRQPTAAERALAAEARETLATA 71

Query: 1123 CED--ARPRDLFSREAVRVLVEDLGLNRSRDP-LLGFRPPKMSIAEKLLLTKRKMEESKE 953
              +   RP+DLF  EAVR +VEDLGLNRS+DP  +GFRPPK SIA++L+LTKRKMEE KE
Sbjct: 72   VAERAVRPKDLFPGEAVRAVVEDLGLNRSKDPAAMGFRPPKASIADRLMLTKRKMEEVKE 131

Query: 952  VVSHSSANATQFQPISFHASSDGNNTLFHGAPRFLPDKPSPFPYHAGGAQTASPMVAVPT 773
                S+         S     +G      G PR   + P P     G   + SP+   P 
Sbjct: 132  APVVSAPQTVVSSGTSEFHGLNGATKFGVGVPR---NPPVPSLAATGPLTSTSPVTLKPP 188

Query: 772  VGXXXXXSKLLQMSATHPVITSAKLATSSTPFATTSHAEVTHFRLDPRSNGSPYLTRVRA 593
                         S   PV  S     S  P   T     ++ +LD   +G   L    A
Sbjct: 189  -----------GSSPVKPVANS-----SVVPLVNTG---PSNLKLDKNVSGPLNLAFSGA 229

Query: 592  TTDCLPEKSSTLSAHSAPNPALRFGQTNKFQDASTVKQEAVHEVNGIQTSVPVIADQDFK 413
            T             HS               + ST+   A  +VN +Q+S   + + D K
Sbjct: 230  TV-----------VHS---------------NKSTLDTSARPDVNAVQSSNQTVKNHDTK 263

Query: 412  GSTVQATSGNLFMGHHS--GLTYVHPPSGFPSHNDIAQIVQRTLQNKASEHSNWAPPSTE 239
               VQA +GN  MGH +  G+ +  P   F +HN+IA+ V + L   A+ H +W PPSTE
Sbjct: 264  PVAVQAATGNPVMGHRATPGVAFAPPKPTFINHNEIAKNVLQFLHQPAN-HPSWTPPSTE 322

Query: 238  YVNKGLSCQICKVAISDVESLLVCDSCEKGTHLRCLQSYGNKGMSKLEWHCPKCLISSNG 59
            Y++  L CQICKV I   ++LLVCD+CE+G HL+CL  YGNKG+ K EWHC  CL  S G
Sbjct: 323  YMHSRLCCQICKVDIIGTDNLLVCDACERGVHLKCLHQYGNKGVPKAEWHCSACLTQSKG 382

Query: 58   KPLPPKYGRVTRS 20
            KPLPPKYG+VTR+
Sbjct: 383  KPLPPKYGKVTRT 395


>gb|AFW73153.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea
            mays] gi|413938603|gb|AFW73154.1| putative RING zinc
            finger domain superfamily protein isoform 2 [Zea mays]
          Length = 727

 Score =  270 bits (691), Expect = 5e-70
 Identities = 180/431 (41%), Positives = 236/431 (54%), Gaps = 4/431 (0%)
 Frame = -3

Query: 1300 AAQPSPKKRPRPPADDH-DLKKVAEIVMVLSAMADMRAGAPPTSVEKSLVAEARDMLVKA 1124
            AA P+   + R   DD   L++VAEIVMVL+A  ++R G  PT+ E++L AEAR+ L  A
Sbjct: 10   AASPACAAQKRRRGDDGAGLRRVAEIVMVLAAAGEVRGGMEPTAAERALAAEARETLAAA 69

Query: 1123 CEDA--RPRDLFSREAVRVLVEDLGLNRSRDPL-LGFRPPKMSIAEKLLLTKRKMEESKE 953
              +   RP+DLFS EAVR +VEDLGLNR++DP  +GFRPPK SIA++L+LTKRKMEE KE
Sbjct: 70   VAEGAVRPKDLFSVEAVRAVVEDLGLNRAKDPAAMGFRPPKASIADRLMLTKRKMEEVKE 129

Query: 952  VVSHSSANATQFQPISFHASSDGNNTLFHGAPRFLPDKPSPFPYHAGGAQTASPMVAVPT 773
                S+ +A Q    S  +   G N    GA +F    P   P                 
Sbjct: 130  APVQSTVSAPQTVVSSGMSDFHGLN----GATKFGVGVPRDPPV---------------- 169

Query: 772  VGXXXXXSKLLQMSATHPVITSAKLATSSTPFATTSHAEVTHFRLDPRSNGSPYLTRVRA 593
                             P IT++   TS++P AT    E   F + P SN S        
Sbjct: 170  -----------------PSITASAPLTSTSP-ATLKPPE--SFPVKPVSNSSVVPVLYSG 209

Query: 592  TTDCLPEKSSTLSAHSAPNPALRFGQTNKFQDASTVKQEAVHEVNGIQTSVPVIADQDFK 413
             ++   +K+      S P      G T    + STV   A   VN    S  ++ +QD K
Sbjct: 210  PSNLKSDKNV-----SGPLNLAHTGATVVHSNKSTVDASARSSVN---ASNQMVKNQDTK 261

Query: 412  GSTVQATSGNLFMGHHSGLTYVHPPSGFPSHNDIAQIVQRTLQNKASEHSNWAPPSTEYV 233
              TVQA +GN   GH +  T++       +HN+IA+ VQ+ L   A+  S W PPST+Y+
Sbjct: 262  PVTVQAMAGNPATGHRATPTFI-------NHNEIAKNVQQFLHQPANNPS-WTPPSTDYM 313

Query: 232  NKGLSCQICKVAISDVESLLVCDSCEKGTHLRCLQSYGNKGMSKLEWHCPKCLISSNGKP 53
            +  LSCQICKV I   +SLLVCD+CE+G HL+CLQ YGNKG+ K EWHC  CL  S GKP
Sbjct: 314  HSRLSCQICKVVIIGTDSLLVCDACERGVHLKCLQQYGNKGVPKAEWHCSACLTQSKGKP 373

Query: 52   LPPKYGRVTRS 20
            LPPKYG+VTR+
Sbjct: 374  LPPKYGKVTRT 384


Top