BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017479
         (704 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF06506.1| RNA polymerase [Elaeis guineensis]                     265   7e-69
dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa s...   247   1e-63
gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indi...   247   1e-63
gb|ABK26380.1| unknown [Picea sitchensis]                             238   1e-60
ref|XP_003580476.1| PREDICTED: DNA-directed RNA polymerases I, I...   231   8e-59

>gb|ACF06506.1| RNA polymerase [Elaeis guineensis]
          Length = 145

 Score =  265 bits (677), Expect = 7e-69
 Identities = 134/146 (91%), Positives = 139/146 (95%)
 Frame = +1

Query: 10  MVELLFEDIFTLTRIDPDGKKFDKVSRIEAHSEQFDMLMQLDVNTEVYPMSVGDKFTMVL 189
           MVELLFEDIFTLTRIDPDGKKFDKVSRIEA SEQFDM MQLDVNTE+YP+ VGDKFTMVL
Sbjct: 1   MVELLFEDIFTLTRIDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLHVGDKFTMVL 60

Query: 190 APTLSLDGTPDSGFYVPGGRKSLADKFEYVMHGKLYKISEESSSGPDVKVEIYASFGGLL 369
           APTLSLDGTPDSG+Y+ G RKSLADKFEYVMHGKLYKISEE SSGP+VKVEIYASFGGLL
Sbjct: 61  APTLSLDGTPDSGYYMQGQRKSLADKFEYVMHGKLYKISEE-SSGPNVKVEIYASFGGLL 119

Query: 370 MMLKGDPSNAANFELDQRLFLLMRKV 447
           MMLKGDPSNA NFELDQRLFLLMRKV
Sbjct: 120 MMLKGDPSNATNFELDQRLFLLMRKV 145


>dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa subunit [Oryza
           sativa Japonica Group]
          Length = 396

 Score =  247 bits (631), Expect = 1e-63
 Identities = 122/146 (83%), Positives = 134/146 (91%)
 Frame = +1

Query: 10  MVELLFEDIFTLTRIDPDGKKFDKVSRIEAHSEQFDMLMQLDVNTEVYPMSVGDKFTMVL 189
           MVE LFEDIFT+TR+DPDGKKFD+VSRIEA SEQFDM MQLDV TEVYPM  GD+FTMVL
Sbjct: 251 MVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMVL 310

Query: 190 APTLSLDGTPDSGFYVPGGRKSLADKFEYVMHGKLYKISEESSSGPDVKVEIYASFGGLL 369
           APTL+LDGTPD+GFY   GRK+LADKF+YVMHGKLYKISE+SSSG   KVEIYASFGGLL
Sbjct: 311 APTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGLL 370

Query: 370 MMLKGDPSNAANFELDQRLFLLMRKV 447
           MMLKGDPS+AA+FELDQRLFLL+RKV
Sbjct: 371 MMLKGDPSSAASFELDQRLFLLIRKV 396


>gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indica Group]
           gi|125598367|gb|EAZ38147.1| hypothetical protein
           OsJ_22498 [Oryza sativa Japonica Group]
          Length = 191

 Score =  247 bits (631), Expect = 1e-63
 Identities = 122/146 (83%), Positives = 134/146 (91%)
 Frame = +1

Query: 10  MVELLFEDIFTLTRIDPDGKKFDKVSRIEAHSEQFDMLMQLDVNTEVYPMSVGDKFTMVL 189
           MVE LFEDIFT+TR+DPDGKKFD+VSRIEA SEQFDM MQLDV TEVYPM  GD+FTMVL
Sbjct: 46  MVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMVL 105

Query: 190 APTLSLDGTPDSGFYVPGGRKSLADKFEYVMHGKLYKISEESSSGPDVKVEIYASFGGLL 369
           APTL+LDGTPD+GFY   GRK+LADKF+YVMHGKLYKISE+SSSG   KVEIYASFGGLL
Sbjct: 106 APTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGLL 165

Query: 370 MMLKGDPSNAANFELDQRLFLLMRKV 447
           MMLKGDPS+AA+FELDQRLFLL+RKV
Sbjct: 166 MMLKGDPSSAASFELDQRLFLLIRKV 191


>gb|ABK26380.1| unknown [Picea sitchensis]
          Length = 145

 Score =  238 bits (606), Expect = 1e-60
 Identities = 118/146 (80%), Positives = 133/146 (91%)
 Frame = +1

Query: 10  MVELLFEDIFTLTRIDPDGKKFDKVSRIEAHSEQFDMLMQLDVNTEVYPMSVGDKFTMVL 189
           MVELLFEDIFT+TRIDPDGKKFDKVSRIEA SEQFDM M LDVN +VYP+SVG+KF + L
Sbjct: 1   MVELLFEDIFTVTRIDPDGKKFDKVSRIEARSEQFDMYMLLDVNIDVYPVSVGEKFAVAL 60

Query: 190 APTLSLDGTPDSGFYVPGGRKSLADKFEYVMHGKLYKISEESSSGPDVKVEIYASFGGLL 369
           APTL+LDGTPD+G+++ GGRKSLADK+EYVM+GKLY +SEE  SG +VKVEI ASFGGLL
Sbjct: 61  APTLNLDGTPDNGYFIQGGRKSLADKYEYVMYGKLYNLSEE-GSGANVKVEINASFGGLL 119

Query: 370 MMLKGDPSNAANFELDQRLFLLMRKV 447
           M+LKGDPSNA NFELDQRLFLLMRKV
Sbjct: 120 MLLKGDPSNAGNFELDQRLFLLMRKV 145


>ref|XP_003580476.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3-like [Brachypodium distachyon]
          Length = 146

 Score =  231 bits (590), Expect = 8e-59
 Identities = 114/146 (78%), Positives = 126/146 (86%)
 Frame = +1

Query: 10  MVELLFEDIFTLTRIDPDGKKFDKVSRIEAHSEQFDMLMQLDVNTEVYPMSVGDKFTMVL 189
           M E LFEDIF + RIDPDGKKFD+V+RIEA SEQF M MQLDV T VYPM  GDKFTMVL
Sbjct: 1   MAEHLFEDIFVVNRIDPDGKKFDRVNRIEARSEQFHMYMQLDVATYVYPMHAGDKFTMVL 60

Query: 190 APTLSLDGTPDSGFYVPGGRKSLADKFEYVMHGKLYKISEESSSGPDVKVEIYASFGGLL 369
           APTL+LDGTPD+G+Y   GRK+LADK++YVMHGKLYKISE+SS G   KVE YASFGGLL
Sbjct: 61  APTLNLDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDSSGGQAAKVETYASFGGLL 120

Query: 370 MMLKGDPSNAANFELDQRLFLLMRKV 447
           M+LKGDPS+AAN ELDQRLFLLMRKV
Sbjct: 121 MLLKGDPSSAANLELDQRLFLLMRKV 146