BLASTX nr result

ID: Dioscorea21_contig00017472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017472
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170344.1| PREDICTED: uncharacterized protein LOC101227...   159   3e-37
ref|XP_004136549.1| PREDICTED: pre-mRNA-splicing factor RSE1-lik...   159   3e-37
ref|XP_002531586.1| spliceosomal protein sap, putative [Ricinus ...   159   3e-37
emb|CBI29964.3| unnamed protein product [Vitis vinifera]              153   1e-35
ref|XP_002276675.1| PREDICTED: pre-mRNA-splicing factor rse1-lik...   153   1e-35

>ref|XP_004170344.1| PREDICTED: uncharacterized protein LOC101227016, partial [Cucumis
           sativus]
          Length = 997

 Score =  159 bits (401), Expect = 3e-37
 Identities = 82/125 (65%), Positives = 97/125 (77%), Gaps = 2/125 (1%)
 Frame = -1

Query: 371 IGEEELHAEIQPSKESTGP--HFLAKFILRGSAVLQAVYGHLRSPSSHDVVFGKETSIEL 198
           + EEE  +    S  ST    ++LAK +LRGS VLQ +YGH+RSPSS DVVFGKETSIEL
Sbjct: 3   VSEEECSSAKSRSSSSTSSSTYYLAKCVLRGSVVLQVLYGHIRSPSSLDVVFGKETSIEL 62

Query: 197 VVIGEDGIVRSICEQPVFGIIKDLAILCWNDGFRESTLQTQGKDLLVVLSDSGKLSFLTF 18
           VVIGEDG+V+S+CEQ VFG IKD+AIL WN+ FR S  Q  GKDLL+V+SDSGKLSFLTF
Sbjct: 63  VVIGEDGVVQSVCEQAVFGTIKDMAILPWNERFRPSYTQMLGKDLLIVISDSGKLSFLTF 122

Query: 17  SLEMH 3
             +MH
Sbjct: 123 CNKMH 127


>ref|XP_004136549.1| PREDICTED: pre-mRNA-splicing factor RSE1-like [Cucumis sativus]
          Length = 1376

 Score =  159 bits (401), Expect = 3e-37
 Identities = 82/125 (65%), Positives = 97/125 (77%), Gaps = 2/125 (1%)
 Frame = -1

Query: 371 IGEEELHAEIQPSKESTGP--HFLAKFILRGSAVLQAVYGHLRSPSSHDVVFGKETSIEL 198
           + EEE  +    S  ST    ++LAK +LRGS VLQ +YGH+RSPSS DVVFGKETSIEL
Sbjct: 3   VSEEECSSAKSRSSSSTSSSTYYLAKCVLRGSVVLQVLYGHIRSPSSLDVVFGKETSIEL 62

Query: 197 VVIGEDGIVRSICEQPVFGIIKDLAILCWNDGFRESTLQTQGKDLLVVLSDSGKLSFLTF 18
           VVIGEDG+V+S+CEQ VFG IKD+AIL WN+ FR S  Q  GKDLL+V+SDSGKLSFLTF
Sbjct: 63  VVIGEDGVVQSVCEQAVFGTIKDMAILPWNERFRPSYTQMLGKDLLIVISDSGKLSFLTF 122

Query: 17  SLEMH 3
             +MH
Sbjct: 123 CNKMH 127


>ref|XP_002531586.1| spliceosomal protein sap, putative [Ricinus communis]
           gi|223528782|gb|EEF30789.1| spliceosomal protein sap,
           putative [Ricinus communis]
          Length = 1220

 Score =  159 bits (401), Expect = 3e-37
 Identities = 78/112 (69%), Positives = 89/112 (79%)
 Frame = -1

Query: 338 PSKESTGPHFLAKFILRGSAVLQAVYGHLRSPSSHDVVFGKETSIELVVIGEDGIVRSIC 159
           PS  S   H+LAK +LRGS VLQ VYGH RSPSS+D+VFGKETSIELV+IGEDGI++SIC
Sbjct: 18  PSASSNSAHYLAKCVLRGSVVLQVVYGHFRSPSSNDIVFGKETSIELVIIGEDGILQSIC 77

Query: 158 EQPVFGIIKDLAILCWNDGFRESTLQTQGKDLLVVLSDSGKLSFLTFSLEMH 3
           EQPVFG IKDLA++ WN+ F   + Q  GKDLL V SDSGKLSFL F  EMH
Sbjct: 78  EQPVFGTIKDLAVIPWNEKFCTRSPQMHGKDLLAVTSDSGKLSFLIFCNEMH 129


>emb|CBI29964.3| unnamed protein product [Vitis vinifera]
          Length = 1363

 Score =  153 bits (387), Expect = 1e-35
 Identities = 75/123 (60%), Positives = 92/123 (74%)
 Frame = -1

Query: 371 IGEEELHAEIQPSKESTGPHFLAKFILRGSAVLQAVYGHLRSPSSHDVVFGKETSIELVV 192
           + EEE  +    S  +   H+LAK +L+GS VL  V+G +RSPS  D+VFGKETS+ELV+
Sbjct: 3   VAEEECSSTKSRSASNNDSHYLAKCVLKGSVVLHVVHGRIRSPSFSDIVFGKETSLELVI 62

Query: 191 IGEDGIVRSICEQPVFGIIKDLAILCWNDGFRESTLQTQGKDLLVVLSDSGKLSFLTFSL 12
           IGEDGIV+S+CEQ VFG IKDLA+L WN+ F    LQ QG+DLLVV+SDSGKLSFL F  
Sbjct: 63  IGEDGIVQSVCEQAVFGTIKDLAVLRWNERFHHQNLQMQGRDLLVVVSDSGKLSFLRFCN 122

Query: 11  EMH 3
           EMH
Sbjct: 123 EMH 125


>ref|XP_002276675.1| PREDICTED: pre-mRNA-splicing factor rse1-like [Vitis vinifera]
          Length = 1387

 Score =  153 bits (387), Expect = 1e-35
 Identities = 75/123 (60%), Positives = 92/123 (74%)
 Frame = -1

Query: 371 IGEEELHAEIQPSKESTGPHFLAKFILRGSAVLQAVYGHLRSPSSHDVVFGKETSIELVV 192
           + EEE  +    S  +   H+LAK +L+GS VL  V+G +RSPS  D+VFGKETS+ELV+
Sbjct: 3   VAEEECSSTKSRSASNNDSHYLAKCVLKGSVVLHVVHGRIRSPSFSDIVFGKETSLELVI 62

Query: 191 IGEDGIVRSICEQPVFGIIKDLAILCWNDGFRESTLQTQGKDLLVVLSDSGKLSFLTFSL 12
           IGEDGIV+S+CEQ VFG IKDLA+L WN+ F    LQ QG+DLLVV+SDSGKLSFL F  
Sbjct: 63  IGEDGIVQSVCEQAVFGTIKDLAVLRWNERFHHQNLQMQGRDLLVVVSDSGKLSFLRFCN 122

Query: 11  EMH 3
           EMH
Sbjct: 123 EMH 125


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