BLASTX nr result

ID: Dioscorea21_contig00017466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017466
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFL48184.1| TBP-associated factor 13 protein [Capsicum annuum]     112   4e-23
gb|AEE36479.1| TBP-associated factor 13 [Solanum melongena]           108   4e-22
gb|ADU56179.1| transcription initiation factor TFIID subunit [Ja...   106   2e-21
ref|XP_003632409.1| PREDICTED: transcription initiation factor T...   105   3e-21
ref|XP_002275358.1| PREDICTED: transcription initiation factor T...   105   3e-21

>gb|AFL48184.1| TBP-associated factor 13 protein [Capsicum annuum]
          Length = 130

 Score =  112 bits (279), Expect = 4e-23
 Identities = 55/58 (94%), Positives = 58/58 (100%)
 Frame = -3

Query: 412 VHKAQDVATKRGKLLTEDFLYLIRKDMPKLHRCTELLSMNEELKQARKAFEVDEEKLA 239
           VHKAQDVATKRGKLLTEDFL+LIRKD+PKL+RCTELLSMNEELKQARKAFEVDEEKLA
Sbjct: 68  VHKAQDVATKRGKLLTEDFLFLIRKDLPKLNRCTELLSMNEELKQARKAFEVDEEKLA 125


>gb|AEE36479.1| TBP-associated factor 13 [Solanum melongena]
          Length = 128

 Score =  108 bits (270), Expect = 4e-22
 Identities = 53/59 (89%), Positives = 57/59 (96%)
 Frame = -3

Query: 412 VHKAQDVATKRGKLLTEDFLYLIRKDMPKLHRCTELLSMNEELKQARKAFEVDEEKLAS 236
           VHKAQDVA+KRGKLLTEDFL+LIRKD+PKL+RCTELLSMNEELKQARKAFEVDEEK  S
Sbjct: 68  VHKAQDVASKRGKLLTEDFLFLIRKDLPKLNRCTELLSMNEELKQARKAFEVDEEKFPS 126


>gb|ADU56179.1| transcription initiation factor TFIID subunit [Jatropha curcas]
          Length = 128

 Score =  106 bits (264), Expect = 2e-21
 Identities = 51/60 (85%), Positives = 56/60 (93%)
 Frame = -3

Query: 409 HKAQDVATKRGKLLTEDFLYLIRKDMPKLHRCTELLSMNEELKQARKAFEVDEEKLASAD 230
           HKAQD+ +KRGKLL EDFLYLIRKD+PKL+RCTELLSM EELKQARKAFEVDEEKLAS +
Sbjct: 69  HKAQDIGSKRGKLLVEDFLYLIRKDLPKLNRCTELLSMQEELKQARKAFEVDEEKLASIE 128


>ref|XP_003632409.1| PREDICTED: transcription initiation factor TFIID subunit 13-like
           [Vitis vinifera] gi|297743959|emb|CBI36929.3| unnamed
           protein product [Vitis vinifera]
          Length = 146

 Score =  105 bits (263), Expect = 3e-21
 Identities = 50/61 (81%), Positives = 59/61 (96%)
 Frame = -3

Query: 412 VHKAQDVATKRGKLLTEDFLYLIRKDMPKLHRCTELLSMNEELKQARKAFEVDEEKLASA 233
           VHKAQ+ A+KRGKLLTEDFL+L+RKD+PKL+RCTELLSMNEELKQARKAF+VDEEKLA+ 
Sbjct: 86  VHKAQETASKRGKLLTEDFLFLMRKDLPKLNRCTELLSMNEELKQARKAFDVDEEKLATM 145

Query: 232 D 230
           +
Sbjct: 146 E 146


>ref|XP_002275358.1| PREDICTED: transcription initiation factor TFIID subunit 13-like
           isoform 3 [Vitis vinifera]
           gi|225437519|ref|XP_002275335.1| PREDICTED:
           transcription initiation factor TFIID subunit 13-like
           isoform 2 [Vitis vinifera]
           gi|225437521|ref|XP_002275286.1| PREDICTED:
           transcription initiation factor TFIID subunit 13-like
           isoform 1 [Vitis vinifera]
           gi|359480146|ref|XP_003632408.1| PREDICTED:
           transcription initiation factor TFIID subunit 13-like
           [Vitis vinifera]
          Length = 128

 Score =  105 bits (263), Expect = 3e-21
 Identities = 50/61 (81%), Positives = 59/61 (96%)
 Frame = -3

Query: 412 VHKAQDVATKRGKLLTEDFLYLIRKDMPKLHRCTELLSMNEELKQARKAFEVDEEKLASA 233
           VHKAQ+ A+KRGKLLTEDFL+L+RKD+PKL+RCTELLSMNEELKQARKAF+VDEEKLA+ 
Sbjct: 68  VHKAQETASKRGKLLTEDFLFLMRKDLPKLNRCTELLSMNEELKQARKAFDVDEEKLATM 127

Query: 232 D 230
           +
Sbjct: 128 E 128


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