BLASTX nr result

ID: Dioscorea21_contig00017459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017459
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324243.1| predicted protein [Populus trichocarpa] gi|2...   119   9e-27
ref|XP_002284115.1| PREDICTED: eukaryotic translation initiation...   120   1e-26
ref|XP_002535481.1| conserved hypothetical protein [Ricinus comm...   122   3e-26
ref|XP_004136214.1| PREDICTED: eukaryotic translation initiation...   120   1e-25
ref|XP_003526476.1| PREDICTED: eukaryotic translation initiation...   119   2e-25

>ref|XP_002324243.1| predicted protein [Populus trichocarpa] gi|222865677|gb|EEF02808.1|
           predicted protein [Populus trichocarpa]
          Length = 519

 Score =  119 bits (299), Expect(2) = 9e-27
 Identities = 54/72 (75%), Positives = 62/72 (86%), Gaps = 1/72 (1%)
 Frame = -1

Query: 249 VESWDNYCSIFGVVLHGVVNMQLPNQWLWYMVDEFVCQFQSYC*YRVKLMNKTE-ELQLL 73
           ++SWDNYC++F VVLHGVVNMQLPNQWLW MVDEFV QFQS+C YR K+ NKTE E+ LL
Sbjct: 112 IDSWDNYCNLFQVVLHGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTEQEIDLL 171

Query: 72  RQNDQAWNVYNL 37
           RQ DQAWNVY +
Sbjct: 172 RQFDQAWNVYGV 183



 Score = 25.4 bits (54), Expect(2) = 9e-27
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = -3

Query: 40  SMIIQILGREKEG 2
           SMIIQIL REKEG
Sbjct: 194 SMIIQILEREKEG 206


>ref|XP_002284115.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           L-like [Vitis vinifera]
          Length = 517

 Score =  120 bits (302), Expect(2) = 1e-26
 Identities = 55/72 (76%), Positives = 62/72 (86%), Gaps = 1/72 (1%)
 Frame = -1

Query: 249 VESWDNYCSIFGVVLHGVVNMQLPNQWLWYMVDEFVCQFQSYC*YRVKLMNKTE-ELQLL 73
           ++SWDNYCS+F VVLHGVVNMQLPNQWLW MVDEFV QFQS+C YR K+ NKTE E+ LL
Sbjct: 110 IDSWDNYCSLFQVVLHGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTEQEIALL 169

Query: 72  RQNDQAWNVYNL 37
           RQ DQAWNVY +
Sbjct: 170 RQYDQAWNVYGV 181



 Score = 23.9 bits (50), Expect(2) = 1e-26
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = -3

Query: 40  SMIIQILGREKEG 2
           SMIIQIL +EKEG
Sbjct: 192 SMIIQILEQEKEG 204


>ref|XP_002535481.1| conserved hypothetical protein [Ricinus communis]
           gi|223522964|gb|EEF26902.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 347

 Score =  122 bits (306), Expect = 3e-26
 Identities = 55/72 (76%), Positives = 63/72 (87%), Gaps = 1/72 (1%)
 Frame = -1

Query: 249 VESWDNYCSIFGVVLHGVVNMQLPNQWLWYMVDEFVCQFQSYC*YRVKLMNKTE-ELQLL 73
           ++SWDNYCS+F VVLHGVVNMQLPNQWLW MVDEFV QFQS+C YR K+ NK+E E+ LL
Sbjct: 121 IDSWDNYCSLFQVVLHGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKSEQEIALL 180

Query: 72  RQNDQAWNVYNL 37
           RQNDQAWNVY +
Sbjct: 181 RQNDQAWNVYGV 192


>ref|XP_004136214.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           L-like [Cucumis sativus]
           gi|449508023|ref|XP_004163195.1| PREDICTED: eukaryotic
           translation initiation factor 3 subunit L-like [Cucumis
           sativus]
          Length = 528

 Score =  120 bits (301), Expect = 1e-25
 Identities = 55/72 (76%), Positives = 62/72 (86%), Gaps = 1/72 (1%)
 Frame = -1

Query: 249 VESWDNYCSIFGVVLHGVVNMQLPNQWLWYMVDEFVCQFQSYC*YRVKLMNKTE-ELQLL 73
           ++SWDNYCS+F VVLHGVVNMQLPNQWLW MVDEFV QFQS+C YR K+ NKTE E+ LL
Sbjct: 120 IDSWDNYCSLFQVVLHGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTEQEIALL 179

Query: 72  RQNDQAWNVYNL 37
           RQ DQAWNVY +
Sbjct: 180 RQFDQAWNVYGV 191


>ref|XP_003526476.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           L-like [Glycine max]
          Length = 516

 Score =  119 bits (297), Expect(2) = 2e-25
 Identities = 54/72 (75%), Positives = 62/72 (86%), Gaps = 1/72 (1%)
 Frame = -1

Query: 249 VESWDNYCSIFGVVLHGVVNMQLPNQWLWYMVDEFVCQFQSYC*YRVKLMNKTE-ELQLL 73
           ++SWDNYCS+F VVLHGVVNMQLPNQWLW MVDEFV QFQS+C YR K+ NKTE E+ LL
Sbjct: 109 IDSWDNYCSLFQVVLHGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTEQEIALL 168

Query: 72  RQNDQAWNVYNL 37
           RQ DQAWNV+ +
Sbjct: 169 RQFDQAWNVFGV 180



 Score = 21.6 bits (44), Expect(2) = 2e-25
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -3

Query: 40  SMIIQILGREKEG 2
           S IIQIL +EKEG
Sbjct: 191 SAIIQILEQEKEG 203


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