BLASTX nr result

ID: Dioscorea21_contig00017426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017426
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW89863.1| putative DEAD-box ATP-dependent RNA helicase fami...   101   7e-20
ref|XP_003577369.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   101   7e-20
ref|XP_003577368.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   101   7e-20
ref|XP_002468672.1| hypothetical protein SORBIDRAFT_01g050040 [S...   101   7e-20
ref|NP_001146459.1| uncharacterized protein LOC100280046 [Zea ma...   101   7e-20

>gb|AFW89863.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
           mays]
          Length = 649

 Score =  101 bits (251), Expect = 7e-20
 Identities = 47/68 (69%), Positives = 59/68 (86%)
 Frame = +1

Query: 1   TQLDNLQLEMDVLIATPGRLIYLLQEGFLLLTNLRCVILDEVDILFGDEGFEQVLQTLSS 180
           TQL++L  E+DV+IATPGR +YLLQEGF+ L NLRCV+LDEVDILFG+EGFEQVL  L +
Sbjct: 368 TQLESLDQELDVIIATPGRFLYLLQEGFVQLANLRCVVLDEVDILFGEEGFEQVLHQLIT 427

Query: 181 FAPMSSQY 204
            AP+++QY
Sbjct: 428 VAPVTTQY 435


>ref|XP_003577369.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 50-like isoform 2
           [Brachypodium distachyon]
          Length = 662

 Score =  101 bits (251), Expect = 7e-20
 Identities = 47/68 (69%), Positives = 59/68 (86%)
 Frame = +1

Query: 1   TQLDNLQLEMDVLIATPGRLIYLLQEGFLLLTNLRCVILDEVDILFGDEGFEQVLQTLSS 180
           TQL++L+ E+DVLIATPGR +YLLQEGF+ L NLRCV+ DEVDILFG+EGFEQVL  L +
Sbjct: 381 TQLESLEQELDVLIATPGRFLYLLQEGFVQLNNLRCVVFDEVDILFGEEGFEQVLHQLIT 440

Query: 181 FAPMSSQY 204
            AP+++QY
Sbjct: 441 VAPVTTQY 448


>ref|XP_003577368.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 50-like isoform 1
           [Brachypodium distachyon]
          Length = 651

 Score =  101 bits (251), Expect = 7e-20
 Identities = 47/68 (69%), Positives = 59/68 (86%)
 Frame = +1

Query: 1   TQLDNLQLEMDVLIATPGRLIYLLQEGFLLLTNLRCVILDEVDILFGDEGFEQVLQTLSS 180
           TQL++L+ E+DVLIATPGR +YLLQEGF+ L NLRCV+ DEVDILFG+EGFEQVL  L +
Sbjct: 370 TQLESLEQELDVLIATPGRFLYLLQEGFVQLNNLRCVVFDEVDILFGEEGFEQVLHQLIT 429

Query: 181 FAPMSSQY 204
            AP+++QY
Sbjct: 430 VAPVTTQY 437


>ref|XP_002468672.1| hypothetical protein SORBIDRAFT_01g050040 [Sorghum bicolor]
           gi|241922526|gb|EER95670.1| hypothetical protein
           SORBIDRAFT_01g050040 [Sorghum bicolor]
          Length = 656

 Score =  101 bits (251), Expect = 7e-20
 Identities = 47/68 (69%), Positives = 59/68 (86%)
 Frame = +1

Query: 1   TQLDNLQLEMDVLIATPGRLIYLLQEGFLLLTNLRCVILDEVDILFGDEGFEQVLQTLSS 180
           TQL++L  E+DV+IATPGR +YLLQEGF+ L NLRCV+LDEVDILFG+EGFEQVL  L +
Sbjct: 375 TQLESLNQELDVIIATPGRFLYLLQEGFVQLANLRCVVLDEVDILFGEEGFEQVLHQLIT 434

Query: 181 FAPMSSQY 204
            AP+++QY
Sbjct: 435 VAPVTTQY 442


>ref|NP_001146459.1| uncharacterized protein LOC100280046 [Zea mays]
           gi|219887353|gb|ACL54051.1| unknown [Zea mays]
           gi|413957213|gb|AFW89862.1| putative DEAD-box
           ATP-dependent RNA helicase family protein [Zea mays]
          Length = 655

 Score =  101 bits (251), Expect = 7e-20
 Identities = 47/68 (69%), Positives = 59/68 (86%)
 Frame = +1

Query: 1   TQLDNLQLEMDVLIATPGRLIYLLQEGFLLLTNLRCVILDEVDILFGDEGFEQVLQTLSS 180
           TQL++L  E+DV+IATPGR +YLLQEGF+ L NLRCV+LDEVDILFG+EGFEQVL  L +
Sbjct: 374 TQLESLDQELDVIIATPGRFLYLLQEGFVQLANLRCVVLDEVDILFGEEGFEQVLHQLIT 433

Query: 181 FAPMSSQY 204
            AP+++QY
Sbjct: 434 VAPVTTQY 441


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