BLASTX nr result

ID: Dioscorea21_contig00017379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017379
         (603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002466189.1| hypothetical protein SORBIDRAFT_01g003170 [S...    59   5e-07
ref|XP_002463622.1| hypothetical protein SORBIDRAFT_01g003050 [S...    58   1e-06
ref|XP_004159846.1| PREDICTED: uncharacterized LOC101209260 [Cuc...    56   6e-06
ref|XP_004134480.1| PREDICTED: uncharacterized protein LOC101209...    56   6e-06
gb|ACG24523.1| mTERF family protein [Zea mays] gi|414873674|tpg|...    56   6e-06

>ref|XP_002466189.1| hypothetical protein SORBIDRAFT_01g003170 [Sorghum bicolor]
           gi|241920043|gb|EER93187.1| hypothetical protein
           SORBIDRAFT_01g003170 [Sorghum bicolor]
          Length = 397

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 30/63 (47%), Positives = 39/63 (61%)
 Frame = +3

Query: 3   LDKRLVPRHHVMQVLKSKGLYSGNFSLGYIMSHSEEKFVKNYLISHKERVPELLDWYIAN 182
           L+KRLVPRHHVM+ L+ KGL + N +L  ++   EE F  N++  HK  VP L D Y A 
Sbjct: 329 LEKRLVPRHHVMKALQEKGLLNSNTNLLQLVLCREEAFKSNFIDRHKNSVPGLADAYAAA 388

Query: 183 SKG 191
             G
Sbjct: 389 RAG 391


>ref|XP_002463622.1| hypothetical protein SORBIDRAFT_01g003050 [Sorghum bicolor]
           gi|241917476|gb|EER90620.1| hypothetical protein
           SORBIDRAFT_01g003050 [Sorghum bicolor]
          Length = 395

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/59 (47%), Positives = 38/59 (64%)
 Frame = +3

Query: 3   LDKRLVPRHHVMQVLKSKGLYSGNFSLGYIMSHSEEKFVKNYLISHKERVPELLDWYIA 179
           L+KRLVPRHHVM+VL+ KGL + N +L  +    E+ F   ++  HK+ VP L D Y A
Sbjct: 327 LEKRLVPRHHVMKVLQEKGLLNSNMNLFTLAHLREDAFKSKFIDGHKDSVPGLADAYAA 385


>ref|XP_004159846.1| PREDICTED: uncharacterized LOC101209260 [Cucumis sativus]
          Length = 344

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/57 (45%), Positives = 38/57 (66%)
 Frame = +3

Query: 3   LDKRLVPRHHVMQVLKSKGLYSGNFSLGYIMSHSEEKFVKNYLISHKERVPELLDWY 173
           L KR++PR +V QVL SKGL   N +LG      E++F++ Y+   KE++PELL+ Y
Sbjct: 279 LKKRILPRGYVYQVLLSKGLIKKNENLGLFFESPEKRFIEKYINPRKEQIPELLELY 335


>ref|XP_004134480.1| PREDICTED: uncharacterized protein LOC101209260 [Cucumis sativus]
          Length = 365

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/57 (45%), Positives = 38/57 (66%)
 Frame = +3

Query: 3   LDKRLVPRHHVMQVLKSKGLYSGNFSLGYIMSHSEEKFVKNYLISHKERVPELLDWY 173
           L KR++PR +V QVL SKGL   N +LG      E++F++ Y+   KE++PELL+ Y
Sbjct: 300 LKKRILPRGYVYQVLLSKGLIKKNENLGLFFESPEKRFIEKYINPRKEQIPELLELY 356


>gb|ACG24523.1| mTERF family protein [Zea mays] gi|414873674|tpg|DAA52231.1| TPA:
           putative mitochondrial transcription termination factor
           family protein [Zea mays]
          Length = 400

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/59 (47%), Positives = 39/59 (66%)
 Frame = +3

Query: 3   LDKRLVPRHHVMQVLKSKGLYSGNFSLGYIMSHSEEKFVKNYLISHKERVPELLDWYIA 179
           L+KRLVPR+ V++VL+ KGL + N SL  + S +EE F   ++  HK+ VP L D Y A
Sbjct: 332 LEKRLVPRYRVIKVLQGKGLLNSNMSLSSLASLAEETFKSKFVDCHKDCVPGLADAYAA 390


Top