BLASTX nr result

ID: Dioscorea21_contig00017373 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017373
         (1423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283148.2| PREDICTED: E3 ubiquitin-protein ligase SDIR1...   358   2e-96
emb|CAN60068.1| hypothetical protein VITISV_012400 [Vitis vinifera]   347   3e-93
ref|XP_002315216.1| predicted protein [Populus trichocarpa] gi|2...   347   4e-93
ref|XP_002468109.1| hypothetical protein SORBIDRAFT_01g039740 [S...   346   1e-92
gb|ADN34069.1| protein binding protein [Cucumis melo subsp. melo]     343   6e-92

>ref|XP_002283148.2| PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Vitis vinifera]
            gi|296086209|emb|CBI31650.3| unnamed protein product
            [Vitis vinifera]
          Length = 275

 Score =  358 bits (918), Expect = 2e-96
 Identities = 184/285 (64%), Positives = 203/285 (71%)
 Frame = +2

Query: 212  MSFVFRGSRGEIESGIPEFIPGRRTVRWHPGARPVNSNSMTFLVAVLLLFMILNSNQMSP 391
            MSFVFRGSR +IESG P FIP RR VR H  ARPVN+NS+ FLV VLLLFMILNS+QMSP
Sbjct: 1    MSFVFRGSRADIESGFPGFIPERRAVRVH-AARPVNTNSLAFLVTVLLLFMILNSHQMSP 59

Query: 392  NFLLWLALGVFLMATSLRMYATCXXXXXXXXXXXXXXSGLLGHTELRLHMPPSIAFATXX 571
            NFL+WL LG+FLMAT+LRMYATC              SGLLGHTELRLHMPPSIA AT  
Sbjct: 60   NFLIWLVLGIFLMATTLRMYATCQQLQAQAQAHAAAASGLLGHTELRLHMPPSIALATRG 119

Query: 572  XXXXXXXXXXXXDREFDDLDYDTLRALDSDNNPDAPSMSEEEINALPVHIYKSQSNQGSI 751
                        DREFDDLDY+TLRALDS+N P  PSMSEEEINALPVH YK    QG  
Sbjct: 120  RLQGLRLQLALLDREFDDLDYETLRALDSENVPTTPSMSEEEINALPVHKYKVAGTQGGG 179

Query: 752  SGPKFNGXXXXXXXXXXGVVIEKKQDNVKSEENSKALGDELTCSVCLEQVNVGELVRSLP 931
            S  +                 EKKQD   +  ++KA  DELTCSVCLEQVNVGEL+RSLP
Sbjct: 180  SSMQ---------QGSSSASAEKKQDINNAVASTKAPDDELTCSVCLEQVNVGELIRSLP 230

Query: 932  CFHQFHCNCIDPWLRQQGTCPICKYRVSSGWQETGEGELDASYMV 1066
            C HQFH NCIDPWLRQQGTCP+CK+R + GWQE G+G +DASYMV
Sbjct: 231  CLHQFHANCIDPWLRQQGTCPVCKFRAAPGWQENGQGGMDASYMV 275


>emb|CAN60068.1| hypothetical protein VITISV_012400 [Vitis vinifera]
          Length = 262

 Score =  347 bits (891), Expect = 3e-93
 Identities = 179/285 (62%), Positives = 197/285 (69%)
 Frame = +2

Query: 212  MSFVFRGSRGEIESGIPEFIPGRRTVRWHPGARPVNSNSMTFLVAVLLLFMILNSNQMSP 391
            MSFVFRGSR +IESG P FIP RR VR H  ARPVN+NS+ FLV VLLLFMILNS+QMSP
Sbjct: 1    MSFVFRGSRADIESGFPGFIPERRAVRVH-AARPVNTNSLAFLVTVLLLFMILNSHQMSP 59

Query: 392  NFLLWLALGVFLMATSLRMYATCXXXXXXXXXXXXXXSGLLGHTELRLHMPPSIAFATXX 571
            NFL+WL LG+FLMAT+LRMYATC              SGLLGHTELRLHMPPSIA AT  
Sbjct: 60   NFLIWLVLGIFLMATTLRMYATCQQLQAHAQAHAAAASGLLGHTELRLHMPPSIALATRG 119

Query: 572  XXXXXXXXXXXXDREFDDLDYDTLRALDSDNNPDAPSMSEEEINALPVHIYKSQSNQGSI 751
                        DREFDDLDY+TLRALDS+N P  PSMSEEEINALPVH YK    QG  
Sbjct: 120  RLQGLRLQLALLDREFDDLDYETLRALDSENVPTTPSMSEEEINALPVHKYKVAGTQGGG 179

Query: 752  SGPKFNGXXXXXXXXXXGVVIEKKQDNVKSEENSKALGDELTCSVCLEQVNVGELVRSLP 931
            S                            S  +++A  DELTCSVCLEQVNVGEL+RSLP
Sbjct: 180  S----------------------SMQQGSSSASAEAPDDELTCSVCLEQVNVGELIRSLP 217

Query: 932  CFHQFHCNCIDPWLRQQGTCPICKYRVSSGWQETGEGELDASYMV 1066
            C HQFH NCIDPWLRQQGTCP+CK+R + GWQE G+G +DASYMV
Sbjct: 218  CLHQFHANCIDPWLRQQGTCPVCKFRAAPGWQENGQGGMDASYMV 262


>ref|XP_002315216.1| predicted protein [Populus trichocarpa] gi|222864256|gb|EEF01387.1|
            predicted protein [Populus trichocarpa]
          Length = 276

 Score =  347 bits (890), Expect = 4e-93
 Identities = 177/285 (62%), Positives = 202/285 (70%)
 Frame = +2

Query: 212  MSFVFRGSRGEIESGIPEFIPGRRTVRWHPGARPVNSNSMTFLVAVLLLFMILNSNQMSP 391
            MSFVFRG+R +IE+G P F+P RRT+R H   RPVNSNS+ FLV VLLLFMILNS+QMSP
Sbjct: 1    MSFVFRGARSDIENGFPSFVPERRTLRVH-ATRPVNSNSLVFLVTVLLLFMILNSHQMSP 59

Query: 392  NFLLWLALGVFLMATSLRMYATCXXXXXXXXXXXXXXSGLLGHTELRLHMPPSIAFATXX 571
            NFLLWL LGVF MAT+LRMYATC              SGLLGHTELRLHMPPSIA AT  
Sbjct: 60   NFLLWLVLGVFFMATTLRMYATCQQLQAQAQAHAVMASGLLGHTELRLHMPPSIALATRG 119

Query: 572  XXXXXXXXXXXXDREFDDLDYDTLRALDSDNNPDAPSMSEEEINALPVHIYKSQSNQGSI 751
                        DREFDDLDY+TLRALD DN P+  SMSEEEINALPVH YK       +
Sbjct: 120  RLQGLRLQLALLDREFDDLDYETLRALDGDNVPNGTSMSEEEINALPVHKYK-------V 172

Query: 752  SGPKFNGXXXXXXXXXXGVVIEKKQDNVKSEENSKALGDELTCSVCLEQVNVGELVRSLP 931
            +GP+ NG              +KKQD   +  + K+  DELTCSVCLEQV++GE++R+LP
Sbjct: 173  TGPQ-NGGSSMQQASSSVSAEQKKQDTGNAIGSMKSSDDELTCSVCLEQVSMGEVIRTLP 231

Query: 932  CFHQFHCNCIDPWLRQQGTCPICKYRVSSGWQETGEGELDASYMV 1066
            C HQFH NCIDPWLRQQGTCP+CK+R  SGW E G+G LDASYMV
Sbjct: 232  CLHQFHANCIDPWLRQQGTCPVCKFRAGSGWNENGQGGLDASYMV 276


>ref|XP_002468109.1| hypothetical protein SORBIDRAFT_01g039740 [Sorghum bicolor]
            gi|241921963|gb|EER95107.1| hypothetical protein
            SORBIDRAFT_01g039740 [Sorghum bicolor]
          Length = 280

 Score =  346 bits (887), Expect = 1e-92
 Identities = 179/286 (62%), Positives = 204/286 (71%), Gaps = 1/286 (0%)
 Frame = +2

Query: 212  MSFVFRGSRGEIESG-IPEFIPGRRTVRWHPGARPVNSNSMTFLVAVLLLFMILNSNQMS 388
            MSFVFRGSR +IE+G  P F P RR +R H G+RPVNSNS+ FL+ VL+LFM+LNS+QMS
Sbjct: 1    MSFVFRGSRADIEAGGFPGFAPERRAMRIHAGSRPVNSNSLAFLLTVLVLFMVLNSHQMS 60

Query: 389  PNFLLWLALGVFLMATSLRMYATCXXXXXXXXXXXXXXSGLLGHTELRLHMPPSIAFATX 568
            PN LLWL LGVFLMATSLRMYATC              +  LGHTELR+H+PP+IA AT 
Sbjct: 61   PNLLLWLVLGVFLMATSLRMYATCQQLAHAAAA-----NNFLGHTELRVHVPPTIALATR 115

Query: 569  XXXXXXXXXXXXXDREFDDLDYDTLRALDSDNNPDAPSMSEEEINALPVHIYKSQSNQGS 748
                         DREFDDLDYDTLRALD+DN+P  PSMSEEEIN+LPV  YK Q+ QG+
Sbjct: 116  GRLQSLRLQLALLDREFDDLDYDTLRALDADNSPHTPSMSEEEINSLPVFKYKVQAQQGN 175

Query: 749  ISGPKFNGXXXXXXXXXXGVVIEKKQDNVKSEENSKALGDELTCSVCLEQVNVGELVRSL 928
                K +G          G   EKKQD +KS+  SK   DELTCSVCLEQV VG+L+RSL
Sbjct: 176  APAQKSDGPSQLSVSST-GSGNEKKQDGLKSDGTSKTPEDELTCSVCLEQVAVGDLLRSL 234

Query: 929  PCFHQFHCNCIDPWLRQQGTCPICKYRVSSGWQETGEGELDASYMV 1066
            PC HQFH NCIDPWLRQQGTCPICK++VS GW  TG GE DASYMV
Sbjct: 235  PCLHQFHVNCIDPWLRQQGTCPICKHQVSDGWHATGNGEEDASYMV 280


>gb|ADN34069.1| protein binding protein [Cucumis melo subsp. melo]
          Length = 275

 Score =  343 bits (880), Expect = 6e-92
 Identities = 182/286 (63%), Positives = 204/286 (71%), Gaps = 1/286 (0%)
 Frame = +2

Query: 212  MSFVFRGSR-GEIESGIPEFIPGRRTVRWHPGARPVNSNSMTFLVAVLLLFMILNSNQMS 388
            MSFVFRG+R  +IE+G+  FIP RR +R H  ARPVNSNS+ FLV VLLLFMILNS+QMS
Sbjct: 1    MSFVFRGTRVPDIENGLSGFIPERRAMRVH-AARPVNSNSLAFLVTVLLLFMILNSHQMS 59

Query: 389  PNFLLWLALGVFLMATSLRMYATCXXXXXXXXXXXXXXSGLLGHTELRLHMPPSIAFATX 568
            PNFLLWL LGVFLMAT+LRMYATC              SGLLGHTELRLHMPPSIA AT 
Sbjct: 60   PNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATR 119

Query: 569  XXXXXXXXXXXXXDREFDDLDYDTLRALDSDNNPDAPSMSEEEINALPVHIYKSQSNQGS 748
                         DREFDDLDY+TLRALDSDN P  PSMSEE+INALPVH YK       
Sbjct: 120  GRLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYK------- 172

Query: 749  ISGPKFNGXXXXXXXXXXGVVIEKKQDNVKSEENSKALGDELTCSVCLEQVNVGELVRSL 928
            +SGP+ +               EK+QD+V +  ++K   DELTCSVCLEQVNVGEL+RSL
Sbjct: 173  VSGPQSDSSVNQQASSSES--NEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSL 230

Query: 929  PCFHQFHCNCIDPWLRQQGTCPICKYRVSSGWQETGEGELDASYMV 1066
            PC HQFH NCIDPWLRQQGTCP+CK+R  SGW E G+GE DA YMV
Sbjct: 231  PCLHQFHANCIDPWLRQQGTCPVCKFRAVSGWSEQGQGETDA-YMV 275


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