BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017368
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF06449.1| small nuclear ribonucleoprotein-like protein [Ela...   210   8e-53
ref|NP_566107.1| small nuclear ribonucleoprotein D2 [Arabidopsis...   207   9e-52
ref|XP_002880318.1| hypothetical protein ARALYDRAFT_483945 [Arab...   206   2e-51
ref|XP_002878480.1| predicted protein [Arabidopsis lyrata subsp....   204   5e-51
ref|NP_001055168.2| Os05g0314100 [Oryza sativa Japonica Group] g...   204   6e-51

>gb|ACF06449.1| small nuclear ribonucleoprotein-like protein [Elaeis guineensis]
          Length = 105

 Score =  210 bits (535), Expect = 8e-53
 Identities = 103/105 (98%), Positives = 104/105 (99%)
 Frame = -1

Query: 328 MEEDANDGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 149
           ME+DAN GKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN
Sbjct: 1   MEDDANAGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 60

Query: 148 VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 14
           VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 61  VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 105


>ref|NP_566107.1| small nuclear ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|145331435|ref|NP_001078076.1| small nuclear
           ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|145339793|ref|NP_567134.3| small nuclear
           ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|20196966|gb|AAM14847.1| putative small nuclear
           ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|20197310|gb|AAC63620.2| putative small nuclear
           ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|330255773|gb|AEC10867.1| small nuclear
           ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|330255776|gb|AEC10870.1| small nuclear
           ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|332646879|gb|AEE80400.1| small nuclear
           ribonucleoprotein D2 [Arabidopsis thaliana]
          Length = 109

 Score =  207 bits (526), Expect = 9e-52
 Identities = 101/108 (93%), Positives = 103/108 (95%)
 Frame = -1

Query: 337 SMSMEEDANDGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMV 158
           S  MEED N GK EEEEFNTGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMV
Sbjct: 2   SKPMEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMV 61

Query: 157 LENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 14
           LENVREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK
Sbjct: 62  LENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK 109


>ref|XP_002880318.1| hypothetical protein ARALYDRAFT_483945 [Arabidopsis lyrata subsp.
           lyrata] gi|21554692|gb|AAM63661.1| small nuclear
           ribonucleoprotein-like protein [Arabidopsis thaliana]
           gi|21592784|gb|AAM64733.1| small nuclear
           ribonucleoprotein-like protein [Arabidopsis thaliana]
           gi|297326157|gb|EFH56577.1| hypothetical protein
           ARALYDRAFT_483945 [Arabidopsis lyrata subsp. lyrata]
          Length = 105

 Score =  206 bits (524), Expect = 2e-51
 Identities = 100/105 (95%), Positives = 102/105 (97%)
 Frame = -1

Query: 328 MEEDANDGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 149
           MEED N GK EEEEFNTGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLEN
Sbjct: 1   MEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLEN 60

Query: 148 VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 14
           VREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK
Sbjct: 61  VREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK 105


>ref|XP_002878480.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297324318|gb|EFH54739.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 109

 Score =  204 bits (520), Expect = 5e-51
 Identities = 100/108 (92%), Positives = 102/108 (94%)
 Frame = -1

Query: 337 SMSMEEDANDGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMV 158
           S  MEED   GK EEEEFNTGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMV
Sbjct: 2   SKPMEEDTTQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMV 61

Query: 157 LENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 14
           LENVREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK
Sbjct: 62  LENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK 109


>ref|NP_001055168.2| Os05g0314100 [Oryza sativa Japonica Group]
           gi|54291778|gb|AAV32147.1| putative small nuclear
           ribonucleoprotein D2 [Oryza sativa Japonica Group]
           gi|215768148|dbj|BAH00377.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215768714|dbj|BAH00943.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218196532|gb|EEC78959.1| hypothetical protein
           OsI_19425 [Oryza sativa Indica Group]
           gi|222631079|gb|EEE63211.1| hypothetical protein
           OsJ_18021 [Oryza sativa Japonica Group]
           gi|255676234|dbj|BAF17082.2| Os05g0314100 [Oryza sativa
           Japonica Group]
          Length = 105

 Score =  204 bits (519), Expect = 6e-51
 Identities = 100/105 (95%), Positives = 102/105 (97%)
 Frame = -1

Query: 328 MEEDANDGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 149
           M E+A  GKKEEEEF+TGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN
Sbjct: 1   MAEEATQGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 60

Query: 148 VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 14
           VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 61  VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 105