BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017360
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    58   9e-07
ref|NP_178368.1| RNase H domain-containing protein [Arabidopsis ...    58   9e-07
gb|AAK98741.1|AC090485_20 Hypothetical protein similar to putati...    56   4e-06
ref|XP_002446117.1| hypothetical protein SORBIDRAFT_06g001955 [S...    56   4e-06
ref|XP_002446451.1| hypothetical protein SORBIDRAFT_06g016220 [S...    55   6e-06

>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 58.2 bits (139), Expect = 9e-07
 Identities = 42/146 (28%), Positives = 61/146 (41%), Gaps = 19/146 (13%)
 Frame = -1

Query: 478  LSIFGDLLDLHL------LNDSIVNENNQNVWVWLP-------------DYKSMRVSAKA 356
            L + GDL+D+        L +   NE +Q   + +P               K    S K 
Sbjct: 963  LEVVGDLMDVERKEWNVELIERHFNERDQQCILAIPLSTRCLQDELTWAYSKDGTYSVKT 1022

Query: 355  YRHLNSNVTIDQSWDGWSHL*RLNVAPKVKHFIWLMFKGKIKTCEYLYSFNLGPQVLCPM 176
               L     +D     W+ L  LNV+PKV+HF+W      +   + L   +L  +  CP 
Sbjct: 1023 AYMLGKGGNLDDFHRVWNILWSLNVSPKVRHFLWRACTSSLPVRKVLQRRHLIDEAGCPC 1082

Query: 175  CALDGETIEHLFNICPKAQILWSNIG 98
            CA + ET  HLF  CP +  LW  +G
Sbjct: 1083 CAREDETQFHLFYRCPMSLKLWEELG 1108


>ref|NP_178368.1| RNase H domain-containing protein [Arabidopsis thaliana]
           gi|3184275|gb|AAC18922.1| putative reverse transcriptase
           [Arabidopsis thaliana] gi|330250513|gb|AEC05607.1| RNase
           H domain-containing protein [Arabidopsis thaliana]
          Length = 365

 Score = 58.2 bits (139), Expect = 9e-07
 Identities = 25/66 (37%), Positives = 37/66 (56%)
 Frame = -1

Query: 292 RLNVAPKVKHFIWLMFKGKIKTCEYLYSFNLGPQVLCPMCALDGETIEHLFNICPKAQIL 113
           +L+VAPK+KHF+W    G + T   L S N+    +C  C ++ ETI H+   CP  Q +
Sbjct: 39  KLHVAPKIKHFLWRCVTGALATNTRLRSRNIDADPICQRCCIEEETIHHIMFNCPYTQSV 98

Query: 112 WSNIGI 95
           W +  I
Sbjct: 99  WRSANI 104


>gb|AAK98741.1|AC090485_20 Hypothetical protein similar to putative retroelements [Oryza
           sativa Japonica Group] gi|27497213|gb|AAO17357.1|
           Putative retroelement [Oryza sativa Japonica Group]
           gi|108706160|gb|ABF93955.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
           gi|125584905|gb|EAZ25569.1| hypothetical protein
           OsJ_09395 [Oryza sativa Japonica Group]
          Length = 387

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 30/91 (32%), Positives = 45/91 (49%)
 Frame = -1

Query: 367 SAKAYRHLNSNVTIDQSWDGWSHL*RLNVAPKVKHFIWLMFKGKIKTCEYLYSFNLGPQV 188
           S++ YR   S +   ++W  WS + R    P+VK F WLM K ++ T   L+   + P  
Sbjct: 209 SSELYR---SEMATFETWPPWSAIWRSAAPPRVKFFAWLMSKNRLPTRVNLHKKTILPTP 265

Query: 187 LCPMCALDGETIEHLFNICPKAQILWSNIGI 95
            C +C  + E   H+F  CP A   W+ I I
Sbjct: 266 TCELCNANLEDTYHIFLRCPMAAAFWNMIQI 296


>ref|XP_002446117.1| hypothetical protein SORBIDRAFT_06g001955 [Sorghum bicolor]
           gi|241937300|gb|EES10445.1| hypothetical protein
           SORBIDRAFT_06g001955 [Sorghum bicolor]
          Length = 247

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 32/102 (31%), Positives = 51/102 (50%)
 Frame = -1

Query: 406 VWVWLPDYKSMRVSAKAYRHLNSNVTIDQSWDGWSHL*RLNVAPKVKHFIWLMFKGKIKT 227
           VW W PD  ++  S+ AY+     +T+     G   L R +V PKVK F+WL  +G++ T
Sbjct: 56  VWRWSPD--AVYSSSSAYKAFFHGLTL---LPGARQLWRASVPPKVKFFVWLALRGRLWT 110

Query: 226 CEYLYSFNLGPQVLCPMCALDGETIEHLFNICPKAQILWSNI 101
            +     +L     C +C  + ET +HL   C  A+ +W  +
Sbjct: 111 SDRRRRHDLQDDASCALCDQEDETTDHLLLGCVFAREVWHRL 152


>ref|XP_002446451.1| hypothetical protein SORBIDRAFT_06g016220 [Sorghum bicolor]
           gi|241937634|gb|EES10779.1| hypothetical protein
           SORBIDRAFT_06g016220 [Sorghum bicolor]
          Length = 828

 Score = 55.5 bits (132), Expect = 6e-06
 Identities = 33/106 (31%), Positives = 52/106 (49%)
 Frame = -1

Query: 406 VWVWLPDYKSMRVSAKAYRHLNSNVTIDQSWDGWSHL*RLNVAPKVKHFIWLMFKGKIKT 227
           VW W PD  ++  S+ AY+     +T+     G   L R +V P+VK F WL  +G+I T
Sbjct: 637 VWRWSPD--AVYSSSSAYKAFFHGLTL---LSGARQLWRASVPPRVKSFAWLALRGRIWT 691

Query: 226 CEYLYSFNLGPQVLCPMCALDGETIEHLFNICPKAQILWSNIGINF 89
            +  +   L     C +C  + ET +HL   C  A+ +W  +  +F
Sbjct: 692 SDRRHRHGLQGDASCALCDQEDETADHLLLGCVFAREVWHRLLSSF 737