BLASTX nr result

ID: Dioscorea21_contig00017350 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017350
         (845 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268907.2| PREDICTED: katanin p80 WD40 repeat-containin...   256   3e-66
emb|CBI35338.3| unnamed protein product [Vitis vinifera]              256   3e-66
ref|XP_002316424.1| predicted protein [Populus trichocarpa] gi|2...   246   5e-63
ref|XP_002311885.1| predicted protein [Populus trichocarpa] gi|2...   244   2e-62
ref|XP_002513719.1| katanin P80 subunit, putative [Ricinus commu...   239   7e-61

>ref|XP_002268907.2| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
            1-like [Vitis vinifera]
          Length = 800

 Score =  256 bits (655), Expect = 3e-66
 Identities = 127/187 (67%), Positives = 155/187 (82%)
 Frame = -3

Query: 810  RGRTLSSRKEMVSASDEDAIADLIEPHEQFLNAAQSRLTKLQVVHRLWQRNDIRGVINAL 631
            RG T S+ KE V ASDEDAI D++E H QF+ + QSRL+KLQVVHR W+RNDI+G I A+
Sbjct: 614  RGYTPSTEKEAVPASDEDAITDIMEQHGQFVGSIQSRLSKLQVVHRFWERNDIKGAIGAM 673

Query: 630  ENMSDHAVSADVLSVLMDNLDIINLDILTFLIPILTSLMEGKMDRHVGISLEMLLKLVKI 451
            E M+DH+V ADV+S+L +  D++ L+I T L+P+LTSL+E +MDRH+GISLEMLLKLV+I
Sbjct: 674  EKMADHSVFADVISILREKPDVVTLEICTSLLPLLTSLLESEMDRHLGISLEMLLKLVRI 733

Query: 450  FGPVIHSTLSAGPLVGVDIQAEQRLEKCNLCFIELEKVKRRLPSLTRRGGSITKSAQELN 271
            FG VIHSTLSA   VGVDIQAEQRLE+CNLCFIELEK+K  LP+LTRRGGS+ K AQELN
Sbjct: 734  FGSVIHSTLSASSSVGVDIQAEQRLERCNLCFIELEKIKHCLPALTRRGGSVAKLAQELN 793

Query: 270  LTLQEVI 250
            L L EV+
Sbjct: 794  LALLEVL 800


>emb|CBI35338.3| unnamed protein product [Vitis vinifera]
          Length = 989

 Score =  256 bits (655), Expect = 3e-66
 Identities = 127/187 (67%), Positives = 155/187 (82%)
 Frame = -3

Query: 810  RGRTLSSRKEMVSASDEDAIADLIEPHEQFLNAAQSRLTKLQVVHRLWQRNDIRGVINAL 631
            RG T S+ KE V ASDEDAI D++E H QF+ + QSRL+KLQVVHR W+RNDI+G I A+
Sbjct: 803  RGYTPSTEKEAVPASDEDAITDIMEQHGQFVGSIQSRLSKLQVVHRFWERNDIKGAIGAM 862

Query: 630  ENMSDHAVSADVLSVLMDNLDIINLDILTFLIPILTSLMEGKMDRHVGISLEMLLKLVKI 451
            E M+DH+V ADV+S+L +  D++ L+I T L+P+LTSL+E +MDRH+GISLEMLLKLV+I
Sbjct: 863  EKMADHSVFADVISILREKPDVVTLEICTSLLPLLTSLLESEMDRHLGISLEMLLKLVRI 922

Query: 450  FGPVIHSTLSAGPLVGVDIQAEQRLEKCNLCFIELEKVKRRLPSLTRRGGSITKSAQELN 271
            FG VIHSTLSA   VGVDIQAEQRLE+CNLCFIELEK+K  LP+LTRRGGS+ K AQELN
Sbjct: 923  FGSVIHSTLSASSSVGVDIQAEQRLERCNLCFIELEKIKHCLPALTRRGGSVAKLAQELN 982

Query: 270  LTLQEVI 250
            L L EV+
Sbjct: 983  LALLEVL 989


>ref|XP_002316424.1| predicted protein [Populus trichocarpa] gi|222865464|gb|EEF02595.1|
            predicted protein [Populus trichocarpa]
          Length = 728

 Score =  246 bits (628), Expect = 5e-63
 Identities = 121/189 (64%), Positives = 152/189 (80%)
 Frame = -3

Query: 819  YTSRGRTLSSRKEMVSASDEDAIADLIEPHEQFLNAAQSRLTKLQVVHRLWQRNDIRGVI 640
            +  RGR  S  KEMVSASDED IADL+E H+QF+++ QSR  KLQVVHR W+RND++G I
Sbjct: 539  FKQRGRAPSIEKEMVSASDEDVIADLMEQHDQFVSSMQSRSAKLQVVHRYWERNDVKGAI 598

Query: 639  NALENMSDHAVSADVLSVLMDNLDIINLDILTFLIPILTSLMEGKMDRHVGISLEMLLKL 460
             A+  M+DHAV ADV+S++ D +D + LDI T L+P+LT+L+E  MDRH  ISL+MLLKL
Sbjct: 599  GAMGKMADHAVLADVISIVADKIDTVTLDICTCLLPLLTNLLESDMDRHSSISLDMLLKL 658

Query: 459  VKIFGPVIHSTLSAGPLVGVDIQAEQRLEKCNLCFIELEKVKRRLPSLTRRGGSITKSAQ 280
            V+ FG +I+STLSA   VGVDI+AEQRLE+CN+CF+ELEKVKR L +LTR+GGS+ K AQ
Sbjct: 659  VRTFGSMIYSTLSASTSVGVDIEAEQRLERCNICFVELEKVKRCLLTLTRKGGSVAKYAQ 718

Query: 279  ELNLTLQEV 253
            ELNL LQEV
Sbjct: 719  ELNLALQEV 727


>ref|XP_002311885.1| predicted protein [Populus trichocarpa] gi|222851705|gb|EEE89252.1|
            predicted protein [Populus trichocarpa]
          Length = 802

 Score =  244 bits (622), Expect = 2e-62
 Identities = 118/189 (62%), Positives = 154/189 (81%)
 Frame = -3

Query: 819  YTSRGRTLSSRKEMVSASDEDAIADLIEPHEQFLNAAQSRLTKLQVVHRLWQRNDIRGVI 640
            +  RGRT S  KE VSA DED IADL+E H+QF+++ QSR  KLQVV+R W+RND++G I
Sbjct: 613  FKQRGRTPSIEKETVSAFDEDVIADLMEQHDQFVSSMQSRSAKLQVVYRYWERNDVKGAI 672

Query: 639  NALENMSDHAVSADVLSVLMDNLDIINLDILTFLIPILTSLMEGKMDRHVGISLEMLLKL 460
             A+E M+DHAV +DV+S++ D +DI+ LDI T L+P+LT+++E  MDRH+ ISL+MLLKL
Sbjct: 673  GAMEKMADHAVLSDVISIVADKIDIVTLDICTCLLPLLTNMLESDMDRHLSISLDMLLKL 732

Query: 459  VKIFGPVIHSTLSAGPLVGVDIQAEQRLEKCNLCFIELEKVKRRLPSLTRRGGSITKSAQ 280
            V++FG +I+STLSA   VGVDI+AEQRLE+CN+CF+ELEKVKR L +LTR+GGS+ K A 
Sbjct: 733  VRMFGSMIYSTLSASTSVGVDIEAEQRLERCNICFVELEKVKRCLLTLTRKGGSVAKFAH 792

Query: 279  ELNLTLQEV 253
            ELNL LQEV
Sbjct: 793  ELNLALQEV 801


>ref|XP_002513719.1| katanin P80 subunit, putative [Ricinus communis]
            gi|223547170|gb|EEF48666.1| katanin P80 subunit, putative
            [Ricinus communis]
          Length = 803

 Score =  239 bits (609), Expect = 7e-61
 Identities = 114/185 (61%), Positives = 151/185 (81%)
 Frame = -3

Query: 810  RGRTLSSRKEMVSASDEDAIADLIEPHEQFLNAAQSRLTKLQVVHRLWQRNDIRGVINAL 631
            RG + ++ KEMVSASDEDAIAD++E H+QF+++ QSR  KLQ VHR W+RND++G I+A+
Sbjct: 617  RGCSPTTEKEMVSASDEDAIADVMEQHDQFVSSMQSRFGKLQAVHRFWERNDVKGAISAM 676

Query: 630  ENMSDHAVSADVLSVLMDNLDIINLDILTFLIPILTSLMEGKMDRHVGISLEMLLKLVKI 451
            E M+DH V ADV+SV+ + +DI+ LD+ T L+P+L  L+E  MDRH+ ISL++LLKLV+ 
Sbjct: 677  EKMADHGVLADVISVINEKIDIVTLDVCTCLLPLLAGLLESDMDRHLSISLDVLLKLVRT 736

Query: 450  FGPVIHSTLSAGPLVGVDIQAEQRLEKCNLCFIELEKVKRRLPSLTRRGGSITKSAQELN 271
            FG +I+ST+SA   VGVDI+AEQRLE+CNLCF+ELEKVKR LP+L RRGGS+ K  QELN
Sbjct: 737  FGSMIYSTVSASTPVGVDIEAEQRLERCNLCFVELEKVKRCLPTLMRRGGSVAKITQELN 796

Query: 270  LTLQE 256
            L LQ+
Sbjct: 797  LALQD 801


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