BLASTX nr result

ID: Dioscorea21_contig00017327 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017327
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK18779.1| berberine bridge enzyme-like protein [Nicotiana ...    59   4e-07
dbj|BAK18780.1| berberine bridge enzyme-like protein [Nicotiana ...    58   9e-07
dbj|BAD03275.1| putative berberine bridge enzyme [Oryza sativa J...    57   2e-06
ref|NP_001061595.2| Os08g0343600 [Oryza sativa Japonica Group] g...    55   6e-06
gb|EEC83421.1| hypothetical protein OsI_28887 [Oryza sativa Indi...    55   6e-06

>dbj|BAK18779.1| berberine bridge enzyme-like protein [Nicotiana tabacum]
          Length = 559

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
 Frame = +2

Query: 32  NISSCLLAAGVLNXXXXXXXXXXXXNLLHFSIQNLRFSS-LLPKPSIIILPSSLADLISS 208
           N+S+CL+   V N            NLLHFS+QNLRF++  +PKP+ IILPSS  +L+S+
Sbjct: 25  NLSACLINHNVHNFSIYPTSRNYF-NLLHFSLQNLRFAAPFMPKPTFIILPSSKEELVST 83

Query: 209 IRCSTHSNLSIRLR 250
           I C   ++  IR+R
Sbjct: 84  IFCCRKASYEIRVR 97


>dbj|BAK18780.1| berberine bridge enzyme-like protein [Nicotiana tabacum]
          Length = 562

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
 Frame = +2

Query: 29  ANISSCLLAAGVLNXXXXXXXXXXXXNLLHFSIQNLRFS-SLLPKPSIIILPSSLADLIS 205
           AN+S+CL+   V N            NLL FS+QNLRF+ S +PKP++IILP+S  +L+S
Sbjct: 28  ANLSTCLINHNVHNFSMYPTSRNYF-NLLDFSLQNLRFAASNMPKPTVIILPNSKEELVS 86

Query: 206 SIRCSTHSNLSIRLR 250
           +I C   ++  IR+R
Sbjct: 87  TILCCRQTSYEIRVR 101


>dbj|BAD03275.1| putative berberine bridge enzyme [Oryza sativa Japonica Group]
          Length = 549

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 7/83 (8%)
 Frame = +2

Query: 23  PPA---NISSCLLAAGVLNXXXXXXXXXXXXNLLHFSIQNLRFS----SLLPKPSIIILP 181
           PPA   ++ SCLLA GV N             LL+FSIQNLRF+      +P+P+ ++LP
Sbjct: 24  PPAAAGSLPSCLLATGVRNFSLAGSPAYDA--LLNFSIQNLRFALPAAGAVPRPAAVVLP 81

Query: 182 SSLADLISSIRCSTHSNLSIRLR 250
              ++L S++ C+ H++L IR+R
Sbjct: 82  RGRSELTSAVLCARHASLRIRVR 104


>ref|NP_001061595.2| Os08g0343600 [Oryza sativa Japonica Group]
           gi|255678373|dbj|BAF23509.2| Os08g0343600 [Oryza sativa
           Japonica Group]
          Length = 553

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
 Frame = +2

Query: 32  NISSCLLAAGVLNXXXXXXXXXXXXNLLHFSIQNLRFS----SLLPKPSIIILPSSLADL 199
           ++ SCLLA GV N             LL+FSIQNLRF+      +P+P+ ++LP   ++L
Sbjct: 34  SLPSCLLATGVRNFSLAGSPAYDA--LLNFSIQNLRFALPAAGAVPRPAAVVLPRGRSEL 91

Query: 200 ISSIRCSTHSNLSIRLR 250
            S++ C+ H++L IR+R
Sbjct: 92  TSAVLCARHASLRIRVR 108


>gb|EEC83421.1| hypothetical protein OsI_28887 [Oryza sativa Indica Group]
          Length = 424

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
 Frame = +2

Query: 32  NISSCLLAAGVLNXXXXXXXXXXXXNLLHFSIQNLRFS----SLLPKPSIIILPSSLADL 199
           ++ SCLLA GV N             LL+FSIQNLRF+      +P+P+ ++LP   ++L
Sbjct: 43  SLPSCLLATGVRNFSLAGSPAYDA--LLNFSIQNLRFALPAAGAVPRPAAVVLPRGRSEL 100

Query: 200 ISSIRCSTHSNLSIRLR 250
            S++ C+ H++L IR+R
Sbjct: 101 TSAVLCARHASLRIRVR 117


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