BLASTX nr result

ID: Dioscorea21_contig00017319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017319
         (1507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001048907.1| Os03g0138100 [Oryza sativa Japonica Group] g...   281   2e-73
gb|ABF93875.1| RNA recognition motif family protein, expressed [...   281   2e-73
gb|EEC74478.1| hypothetical protein OsI_09930 [Oryza sativa Indi...   280   5e-73
gb|ABF93874.1| RNA recognition motif family protein, expressed [...   275   2e-71
emb|CBI23686.3| unnamed protein product [Vitis vinifera]              270   1e-69

>ref|NP_001048907.1| Os03g0138100 [Oryza sativa Japonica Group]
            gi|113547378|dbj|BAF10821.1| Os03g0138100 [Oryza sativa
            Japonica Group]
          Length = 404

 Score =  281 bits (720), Expect = 2e-73
 Identities = 175/399 (43%), Positives = 234/399 (58%), Gaps = 24/399 (6%)
 Frame = +1

Query: 13   EKLQAAVKIISDVVEDSPNKIFIAGISNVLSSDMLIEIVSAFGSLKAYHFEFKEEINGAC 192
            +K    +K+ISDVV DSP+KIFIAGIS V+SS+ML+EIVS+FG L AY F F E + GAC
Sbjct: 8    KKPSEEIKLISDVVADSPHKIFIAGISGVISSEMLMEIVSSFGPLAAYRFLFNEYLGGAC 67

Query: 193  AFVEYEEPSITLKACAGLNGMKLGGNVLIAVQATPHAHSEEDTRSIPSYDIPEPAKPLLA 372
            AF+EY + SIT KACAGLNGMKLGG +L AV   P++  +    + P Y IP+ AK LL 
Sbjct: 68   AFLEYIDHSITSKACAGLNGMKLGGGILTAVNVFPNSTEQAFNEASPFYGIPDSAKSLLE 127

Query: 373  SPTKVLQLKNMLVQEELLLLSDHEIEETLENIRLECARFGTIKFLNLVRYESNSRAGPLV 552
             PTKVLQLKN+  QEE LLLS  E+EE LE++R+ECARFG +K +N+V+Y ++S      
Sbjct: 128  EPTKVLQLKNVFDQEEYLLLSKSELEEILEDVRVECARFGAVKSINVVKYPASSDNTTGD 187

Query: 553  SVQETNGESTRIESTEGG-----SHTEQNNLISSSNTEELKGERDADQDTNTSDTELI-- 711
            ++ E    ST+IE  E G     + T     + + +T+         QD    DT+ I  
Sbjct: 188  TITECEDGSTKIEPKEYGGNVSCTETGVECSVLNQSTDVPDPSICEVQDPVELDTDSIPK 247

Query: 712  ----KSSEAKDDPDDSTLQRELLK--VTSPQITIDDHVNDKVEPMPKSEANAELAI---- 861
                K+ + + + D  T   E     V + Q    D  +D    + +  A+A+ A     
Sbjct: 248  GRDHKNLDTRGECDAPTAGDENTDQGVEADQTDSTDAQDDARGTIERGHADADPASLETS 307

Query: 862  ------DVEDKPDAGNENGKETPVEDANT-KAIIVKTTEVGDQQAQNLKLFEAGCILVEY 1020
                  D  DK    NE      V ++NT KA  V   +  +  A N    EAGCILVE+
Sbjct: 308  CSTAPGDGADKSGRENEQQGGAGVSESNTEKAPAVDARD--NALASNTSALEAGCILVEF 365

Query: 1021 LREEAACKAAHCLHGRSYGERVIAAGYVPHDLYLSQFPR 1137
            LR+EAAC AAH LHGR +G R+++AGY PHDLYL ++PR
Sbjct: 366  LRKEAACIAAHSLHGRRFGSRIVSAGYAPHDLYLQKYPR 404


>gb|ABF93875.1| RNA recognition motif family protein, expressed [Oryza sativa
            Japonica Group]
          Length = 964

 Score =  281 bits (720), Expect = 2e-73
 Identities = 175/399 (43%), Positives = 234/399 (58%), Gaps = 24/399 (6%)
 Frame = +1

Query: 13   EKLQAAVKIISDVVEDSPNKIFIAGISNVLSSDMLIEIVSAFGSLKAYHFEFKEEINGAC 192
            +K    +K+ISDVV DSP+KIFIAGIS V+SS+ML+EIVS+FG L AY F F E + GAC
Sbjct: 568  KKPSEEIKLISDVVADSPHKIFIAGISGVISSEMLMEIVSSFGPLAAYRFLFNEYLGGAC 627

Query: 193  AFVEYEEPSITLKACAGLNGMKLGGNVLIAVQATPHAHSEEDTRSIPSYDIPEPAKPLLA 372
            AF+EY + SIT KACAGLNGMKLGG +L AV   P++  +    + P Y IP+ AK LL 
Sbjct: 628  AFLEYIDHSITSKACAGLNGMKLGGGILTAVNVFPNSTEQAFNEASPFYGIPDSAKSLLE 687

Query: 373  SPTKVLQLKNMLVQEELLLLSDHEIEETLENIRLECARFGTIKFLNLVRYESNSRAGPLV 552
             PTKVLQLKN+  QEE LLLS  E+EE LE++R+ECARFG +K +N+V+Y ++S      
Sbjct: 688  EPTKVLQLKNVFDQEEYLLLSKSELEEILEDVRVECARFGAVKSINVVKYPASSDNTTGD 747

Query: 553  SVQETNGESTRIESTEGG-----SHTEQNNLISSSNTEELKGERDADQDTNTSDTELI-- 711
            ++ E    ST+IE  E G     + T     + + +T+         QD    DT+ I  
Sbjct: 748  TITECEDGSTKIEPKEYGGNVSCTETGVECSVLNQSTDVPDPSICEVQDPVELDTDSIPK 807

Query: 712  ----KSSEAKDDPDDSTLQRELLK--VTSPQITIDDHVNDKVEPMPKSEANAELAI---- 861
                K+ + + + D  T   E     V + Q    D  +D    + +  A+A+ A     
Sbjct: 808  GRDHKNLDTRGECDAPTAGDENTDQGVEADQTDSTDAQDDARGTIERGHADADPASLETS 867

Query: 862  ------DVEDKPDAGNENGKETPVEDANT-KAIIVKTTEVGDQQAQNLKLFEAGCILVEY 1020
                  D  DK    NE      V ++NT KA  V   +  +  A N    EAGCILVE+
Sbjct: 868  CSTAPGDGADKSGRENEQQGGAGVSESNTEKAPAVDARD--NALASNTSALEAGCILVEF 925

Query: 1021 LREEAACKAAHCLHGRSYGERVIAAGYVPHDLYLSQFPR 1137
            LR+EAAC AAH LHGR +G R+++AGY PHDLYL ++PR
Sbjct: 926  LRKEAACIAAHSLHGRRFGSRIVSAGYAPHDLYLQKYPR 964


>gb|EEC74478.1| hypothetical protein OsI_09930 [Oryza sativa Indica Group]
          Length = 1128

 Score =  280 bits (717), Expect = 5e-73
 Identities = 174/399 (43%), Positives = 233/399 (58%), Gaps = 24/399 (6%)
 Frame = +1

Query: 13   EKLQAAVKIISDVVEDSPNKIFIAGISNVLSSDMLIEIVSAFGSLKAYHFEFKEEINGAC 192
            +K    +K+ISDVV DSP+KIFIAGIS V+SS+ML+EIVS+FG L AY F F E++ GAC
Sbjct: 732  KKPSEEIKLISDVVADSPHKIFIAGISGVISSEMLMEIVSSFGPLAAYRFLFNEDLGGAC 791

Query: 193  AFVEYEEPSITLKACAGLNGMKLGGNVLIAVQATPHAHSEEDTRSIPSYDIPEPAKPLLA 372
            AF+EY + SIT KACAGLNGMKLGG +L AV   P++  +    + P Y IP+ AK LL 
Sbjct: 792  AFLEYIDHSITSKACAGLNGMKLGGGILTAVNVFPNSTEQAFNEASPFYGIPDSAKSLLE 851

Query: 373  SPTKVLQLKNMLVQEELLLLSDHEIEETLENIRLECARFGTIKFLNLVRYESNSRAGPLV 552
             PTKVLQLKN+  QEE LLLS  E+EE LE++R+ECARFG +K +N+V Y ++S      
Sbjct: 852  EPTKVLQLKNVFDQEEYLLLSKSELEEILEDVRVECARFGAVKSINVVEYPASSDNTTGD 911

Query: 553  SVQETNGESTRIESTEGG-----SHTEQNNLISSSNTEELKGERDADQDTNTSDTELI-- 711
            ++ E    ST+IE  E G     + T     + + +T+         QD    DT+ I  
Sbjct: 912  TITECEDGSTKIEPKEYGGNVSCTETGVECSVLNQSTDVPDPSICEVQDPVELDTDSIPK 971

Query: 712  ----KSSEAKDDPDDSTLQRELLK--VTSPQITIDDHVNDKVEPMPKSEANAELAI---- 861
                K+ + + + D  T   E     V + Q    D  +D    + +  A+A+ A     
Sbjct: 972  GRDHKNLDTRGECDAPTAGDENTDQGVEADQTDSTDAQDDARGTIERGHADADQASLETS 1031

Query: 862  ------DVEDKPDAGNENGKETPVEDANT-KAIIVKTTEVGDQQAQNLKLFEAGCILVEY 1020
                  D  DK    NE      V ++NT KA  V   +  +  A N    EAGCILVE+
Sbjct: 1032 CSTAPGDGADKSGRENEQQGGAGVSESNTEKAPAVDARD--NALASNTSALEAGCILVEF 1089

Query: 1021 LREEAACKAAHCLHGRSYGERVIAAGYVPHDLYLSQFPR 1137
            LR+EAAC AAH LHGR +G R+++AGY PHDLYL ++ R
Sbjct: 1090 LRKEAACTAAHSLHGRRFGSRIVSAGYAPHDLYLQKYTR 1128


>gb|ABF93874.1| RNA recognition motif family protein, expressed [Oryza sativa
            Japonica Group]
          Length = 964

 Score =  275 bits (703), Expect = 2e-71
 Identities = 173/399 (43%), Positives = 232/399 (58%), Gaps = 24/399 (6%)
 Frame = +1

Query: 13   EKLQAAVKIISDVVEDSPNKIFIAGISNVLSSDMLIEIVSAFGSLKAYHFEFKEEINGAC 192
            +K    +K+ISDVV DSP+KIFIAGIS V+SS+ML+EIVS+FG L AY F F E + GAC
Sbjct: 568  KKPSEEIKLISDVVADSPHKIFIAGISGVISSEMLMEIVSSFGPLAAYRFLFNEYLGGAC 627

Query: 193  AFVEYEEPSITLKACAGLNGMKLGGNVLIAVQATPHAHSEEDTRSIPSYDIPEPAKPLLA 372
            AF+EY + SIT KACAGLNGMKLGG +L AV   P++  +    + P Y IP+ AK LL 
Sbjct: 628  AFLEYIDHSITSKACAGLNGMKLGGGILTAVNVFPNSTEQAFNEASPFYGIPDSAKSLLE 687

Query: 373  SPTKVLQLKNMLVQEELLLLSDHEIEETLENIRLECARFGTIKFLNLVRYESNSRAGPLV 552
             PTKVLQLKN+  QEE LLLS  E+EE LE++R+E  RFG +K +N+V+Y ++S      
Sbjct: 688  EPTKVLQLKNVFDQEEYLLLSKSELEEILEDVRVEYDRFGAVKSINVVKYPASSDNTTGD 747

Query: 553  SVQETNGESTRIESTEGG-----SHTEQNNLISSSNTEELKGERDADQDTNTSDTELI-- 711
            ++ E    ST+IE  E G     + T     + + +T+         QD    DT+ I  
Sbjct: 748  TITECEDGSTKIEPKEYGGNVSCTETGVECSVLNQSTDVPDPSICEVQDPVELDTDSIPK 807

Query: 712  ----KSSEAKDDPDDSTLQRELLK--VTSPQITIDDHVNDKVEPMPKSEANAELAI---- 861
                K+ + + + D  T   E     V + Q    D  +D    + +  A+A+ A     
Sbjct: 808  GRDHKNLDTRGECDAPTAGDENTDQGVEADQTDSTDAQDDARGTIERGHADADPASLETS 867

Query: 862  ------DVEDKPDAGNENGKETPVEDANT-KAIIVKTTEVGDQQAQNLKLFEAGCILVEY 1020
                  D  DK    NE      V ++NT KA  V   +  +  A N    EAGCILVE+
Sbjct: 868  CSTAPGDGADKSGRENEQQGGAGVSESNTEKAPAVDARD--NALASNTSALEAGCILVEF 925

Query: 1021 LREEAACKAAHCLHGRSYGERVIAAGYVPHDLYLSQFPR 1137
            LR+EAAC AAH LHGR +G R+++AGY PHDLYL ++PR
Sbjct: 926  LRKEAACIAAHSLHGRRFGSRIVSAGYAPHDLYLQKYPR 964


>emb|CBI23686.3| unnamed protein product [Vitis vinifera]
          Length = 882

 Score =  270 bits (689), Expect = 1e-69
 Identities = 169/418 (40%), Positives = 237/418 (56%), Gaps = 39/418 (9%)
 Frame = +1

Query: 1    TGNQEKLQAAVKIISDVVEDSPNKIFIAGISNVLSSDMLIEIVSAFGSLKAYHFEFKEEI 180
            TG QEKL AA   ISD+V+DSP+KIFI GIS  LSSDML+EI +AFG LKAY F+  E++
Sbjct: 491  TGVQEKLVAAPDAISDIVKDSPHKIFIGGISRALSSDMLMEIAAAFGPLKAYRFQVNEDL 550

Query: 181  NGACAFVEYEEPSITLKACAGLNGMKLGGNVLIAVQATPHAHSEEDTRSIPSYDIPEPAK 360
               CAF+EY + S+TLKACAGLNGMKLGG VL  VQA P+A + E+T ++P Y IPE AK
Sbjct: 551  GEPCAFLEYVDQSVTLKACAGLNGMKLGGQVLTVVQAIPNALAMENTGNLPFYGIPEHAK 610

Query: 361  PLLASPTKVLQLKNMLVQEELLLLSDHEIEETLENIRLECARFGTIKFLNLVRYESNSRA 540
            PLL  PT+VL+LKN++  ++L  LS+ E+EE LE+IRLEC RFGT+K +N+V+Y +NS  
Sbjct: 611  PLLERPTQVLKLKNVVNPDDLSSLSEAELEEILEDIRLECTRFGTVKSVNIVKY-NNSHV 669

Query: 541  GPLVSVQETN---------GESTRIESTEGGSHT-------EQNNLISSSN-TEELKGE- 666
              L   +  +         G S + E+  GG+         E+N++    + T+ +K E 
Sbjct: 670  STLEVYEAADNTGSNLGCDGNSMKAETLGGGTDNGSIDEVVERNSISDDKSLTDLIKNEL 729

Query: 667  -RDADQDTNTSDTE--------------------LIKSSEAKDDPDDSTLQRELLKVTSP 783
               +  D+NT+  E                    +    E ++D     +Q + + + + 
Sbjct: 730  CEPSHIDSNTAVKEPGCPDGSDDIPRGLPDQLNNMKHEVELRNDKAADVIQEDFI-IKNK 788

Query: 784  QITIDDHVNDKVEPMPKSEANAELAIDVEDKPDAGNENGKETPVEDANTKAIIVKTTEVG 963
             +T+++  N K+        +AEL      K D   +N  E  + D +            
Sbjct: 789  LMTVEEETNRKL-----LGTSAELDSSPGIKSDFTGKNDSEKGLCDLDD----------- 832

Query: 964  DQQAQNLKLFEAGCILVEYLREEAACKAAHCLHGRSYGERVIAAGYVPHDLYLSQFPR 1137
                    +FE GC+LVEY R EA+C AAHCLHGR + +RV+  GYV  DLY  +FPR
Sbjct: 833  --------MFEVGCVLVEYGRTEASCMAAHCLHGRYFDDRVVVVGYVALDLYRMKFPR 882


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