BLASTX nr result

ID: Dioscorea21_contig00017288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017288
         (988 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275285.1| PREDICTED: TATA-binding protein-associated f...   340   4e-91
ref|XP_003633864.1| PREDICTED: TATA-binding protein-associated f...   335   1e-89
ref|XP_002523964.1| TATA-binding protein-associated factor MOT1,...   334   2e-89
ref|XP_003565806.1| PREDICTED: TATA-binding protein-associated f...   332   1e-88
emb|CBI40030.3| unnamed protein product [Vitis vinifera]              331   2e-88

>ref|XP_002275285.1| PREDICTED: TATA-binding protein-associated factor 172 isoform 1
           [Vitis vinifera]
          Length = 2052

 Score =  340 bits (871), Expect = 4e-91
 Identities = 178/307 (57%), Positives = 223/307 (72%), Gaps = 11/307 (3%)
 Frame = -2

Query: 891 MAQNSSRLHRLLTLLDTGSTQATRLAAARQIGDIAKLYPQDLNSLLKKVSGYLRSKNWDT 712
           M+  SSRLHRLLTLLDTGSTQATRL AARQIGDIAK +PQDLNSLL+KVS YLRSKNWDT
Sbjct: 1   MSHQSSRLHRLLTLLDTGSTQATRLTAARQIGDIAKSHPQDLNSLLRKVSQYLRSKNWDT 60

Query: 711 RVXXXXXXXXXAENVKHISVKELFGCIEAEMADAGFPDASKDMGILWSNFTPNVVAGLSF 532
           RV         AENVKH S+ ELF C+   M++AG     +D+ + W ++ P ++AG  F
Sbjct: 61  RVAAAHAIGAIAENVKHSSLSELFACVGKRMSEAGISGEVEDV-VAWPDYHPKIMAGSPF 119

Query: 531 RSFDINKVLEFGSPLLASGGQEYDVASDSSKNPAERLHLQKQNLRRRLGLDVCEQFMDVS 352
           RSFDINKVLEFG+ LLASGGQEYD+ASD++KNP +RL  QKQNLRRRLGLD+CEQFMDV+
Sbjct: 120 RSFDINKVLEFGA-LLASGGQEYDIASDNTKNPRDRLARQKQNLRRRLGLDMCEQFMDVN 178

Query: 351 DVIRDEDLVTQRGPYAANGVLHGYYGPQSRQNIHQLVAKMAPSYVRRRLSARELNILKRK 172
           D+IRDEDL+  +     NG+ + +   QS  +I +LVA M P+ + +R SARELN+LKRK
Sbjct: 179 DMIRDEDLIVHKFNPQGNGIDNRFNNSQSVHSIQRLVANMVPTIISKRPSARELNLLKRK 238

Query: 171 AKVNAKDHPSSMAPSGASS-----------DTQGANKVIMDDFVDEDSNEHDGSGAWPFS 25
           AK+N+KD     +  G ++           ++  ++KV MD  VDED+ +HDG G WPF 
Sbjct: 239 AKINSKDQTKGWSEDGDTAEVLTTPKESCPESLHSDKVFMDPIVDEDNFDHDGDGRWPFH 298

Query: 24  SFVEQLI 4
           SFVEQL+
Sbjct: 299 SFVEQLL 305


>ref|XP_003633864.1| PREDICTED: TATA-binding protein-associated factor 172 isoform 3
           [Vitis vinifera]
          Length = 2060

 Score =  335 bits (858), Expect = 1e-89
 Identities = 180/315 (57%), Positives = 220/315 (69%), Gaps = 19/315 (6%)
 Frame = -2

Query: 891 MAQNSSRLHRLLTLLDTGSTQATRLAAARQIGDIAKLYPQDLNSLLKKVSGYLRSKNWDT 712
           M+  SSRLHRLLTLLDTGSTQATRL AARQIGDIAK +PQDLNSLL+KVS YLRSKNWDT
Sbjct: 1   MSHQSSRLHRLLTLLDTGSTQATRLTAARQIGDIAKSHPQDLNSLLRKVSQYLRSKNWDT 60

Query: 711 RVXXXXXXXXXAENVKHISVKELFGCIEAEMADAGFPDASKDMGILWSNFTPNVVAGLSF 532
           RV         AENVKH S+ ELF C+   M++AG     +D+ + W ++ P ++AG  F
Sbjct: 61  RVAAAHAIGAIAENVKHSSLSELFACVGKRMSEAGISGEVEDV-VAWPDYHPKIMAGSPF 119

Query: 531 RSFDINKVLEFGSPLLASGGQEYDVASDSSKNPAERLHLQKQNLRRRLGLDVCEQFMDVS 352
           RSFDINKVLEFG+ LLASGGQEYD+ASD++KNP +RL  QKQNLRRRLGLD+CEQFMDV+
Sbjct: 120 RSFDINKVLEFGA-LLASGGQEYDIASDNTKNPRDRLARQKQNLRRRLGLDMCEQFMDVN 178

Query: 351 DVIRDEDLVTQRGPYAANGVLHGYYGPQSRQNIHQLVAKMAPSYVRRRLSARELNILKRK 172
           D+IRDEDL+  +     NG+ + +   QS  +I +LVA M P+ + +R SARELN+LKRK
Sbjct: 179 DMIRDEDLIVHKFNPQGNGIDNRFNNSQSVHSIQRLVANMVPTIISKRPSARELNLLKRK 238

Query: 171 AKVNAKDH----------------PSSMAPSGASSD---TQGANKVIMDDFVDEDSNEHD 49
           AK+N+KD                 P    P    SD      + +V MD  VDED+ +HD
Sbjct: 239 AKINSKDQTKGWSEDGDTAEVLTTPKESCPESLHSDKVFDSYSLQVFMDPIVDEDNFDHD 298

Query: 48  GSGAWPFSSFVEQLI 4
           G G WPF SFVEQL+
Sbjct: 299 GDGRWPFHSFVEQLL 313


>ref|XP_002523964.1| TATA-binding protein-associated factor MOT1, putative [Ricinus
           communis] gi|223536691|gb|EEF38332.1| TATA-binding
           protein-associated factor MOT1, putative [Ricinus
           communis]
          Length = 1920

 Score =  334 bits (857), Expect = 2e-89
 Identities = 183/310 (59%), Positives = 220/310 (70%), Gaps = 14/310 (4%)
 Frame = -2

Query: 891 MAQNSSRLHRLLTLLDTGSTQATRLAAARQIGDIAKLYPQDLNSLLKKVSGYLRSKNWDT 712
           MAQ SSRLHRLLTLLDTGSTQATR  AARQIGDIAK +PQDL+SLLKKVS YLRSKNWDT
Sbjct: 1   MAQQSSRLHRLLTLLDTGSTQATRFTAARQIGDIAKSHPQDLSSLLKKVSQYLRSKNWDT 60

Query: 711 RVXXXXXXXXXAENVKHISVKELFGCIEAEMADAGFPDASKDMGILWSNFTPNVVAGLSF 532
           RV         A+NVKH S+ ELF  +EA+M++ G     +D+ + W +F   +++  SF
Sbjct: 61  RVAAAHAIGAIAQNVKHTSLAELFASVEAKMSEVGMSGVVEDL-VAWPDFLSKIISSGSF 119

Query: 531 RSFDINKVLEFGSPLLASGGQEYDVASDSSKNPAERLHLQKQNLRRRLGLDVCEQFMDVS 352
           RSF+INKVLEFG+ LLAS GQEYD+A+D+SKNP ERL  QKQNLRRRLGLDVCEQFMDV+
Sbjct: 120 RSFEINKVLEFGA-LLASRGQEYDIANDNSKNPRERLARQKQNLRRRLGLDVCEQFMDVN 178

Query: 351 DVIRDEDLVTQRGPYAANGVLHGYYGPQSRQNIHQLVAKMAPSYVRRRLSARELNILKRK 172
           DVI+DEDL+ Q+     NG+ + +Y P S  NI QLVA M P+ V RR SARELN+LKRK
Sbjct: 179 DVIKDEDLLVQKLHSQGNGLGNRFYMPPSVHNIQQLVASMVPTVVSRRPSARELNLLKRK 238

Query: 171 AKVNAKDH--------------PSSMAPSGASSDTQGANKVIMDDFVDEDSNEHDGSGAW 34
           AK+N+KD                 S  P  ++ D+  ++KV      DEDS EHDG G W
Sbjct: 239 AKINSKDQTKGWSEDGDAEMSFSQSTTPKASNQDSFNSSKV----DADEDSFEHDGDGKW 294

Query: 33  PFSSFVEQLI 4
           PF  FVEQL+
Sbjct: 295 PFRGFVEQLM 304


>ref|XP_003565806.1| PREDICTED: TATA-binding protein-associated factor 172-like
           [Brachypodium distachyon] gi|293630862|gb|ACU12857.2|
           Mot1 [Brachypodium distachyon]
          Length = 2067

 Score =  332 bits (850), Expect = 1e-88
 Identities = 183/315 (58%), Positives = 217/315 (68%), Gaps = 18/315 (5%)
 Frame = -2

Query: 891 MAQNSSRLHRLLTLLDTGSTQATRLAAARQIGDIAKLYPQDLNSLLKKVSGYLRSKNWDT 712
           MAQ+SSRLHRLLTLLDTGSTQATR AAA QIG+IAK +PQ+LN+LLKKVS YLRSKNWDT
Sbjct: 1   MAQSSSRLHRLLTLLDTGSTQATRFAAACQIGEIAKSHPQELNALLKKVSQYLRSKNWDT 60

Query: 711 RVXXXXXXXXXAENVKHISVKELFGCIEAEMADAGFPDASKDMGILWSNFTPNVVAGLSF 532
           RV         AENVKH S+K+LF  +EAE   +G  D + D+G           + L F
Sbjct: 61  RVAAAHAIGAIAENVKHTSLKDLFASVEAEKHASGLSDETGDVGSTLPRPDTTATSELDF 120

Query: 531 RSFDINKVLEFGSPLLASGGQEYDVASDSSKNPAERLHLQKQNLRRRLGLDVCEQFMDVS 352
            SF+IN+VL FGSPLL+SGGQEYDV +D  KNPA+RL  QKQNLRRRLGLDVCEQFMD +
Sbjct: 121 GSFEINRVLAFGSPLLSSGGQEYDVGNDGGKNPADRLARQKQNLRRRLGLDVCEQFMDFN 180

Query: 351 DVIRDEDLVTQRGPYAANGVLHGYYGPQSRQNIHQLVAKMAPSYVR------RRLSAREL 190
           DVI+DEDL+ Q+  + AN   +G+Y   + QNI  LVA M P Y +      RRLSARE 
Sbjct: 181 DVIKDEDLLAQKNYWGANVQNNGFYSFNTGQNIQHLVASMVPRYSKHSNFRPRRLSARER 240

Query: 189 NILKRKAKVNAKDHPSSM------------APSGASSDTQGANKVIMDDFVDEDSNEHDG 46
           N+LKRKAK NAKDH  S+            + +GASSD  GA+    D  VDED+ E+  
Sbjct: 241 NMLKRKAKSNAKDHTKSVPDDDEVVLRNSASSNGASSDQVGAHNDASDAVVDEDNMEYRE 300

Query: 45  SGAWPFSSFVEQLIH 1
           SG WPF  FV+QLIH
Sbjct: 301 SGRWPFQQFVDQLIH 315


>emb|CBI40030.3| unnamed protein product [Vitis vinifera]
          Length = 1884

 Score =  331 bits (848), Expect = 2e-88
 Identities = 178/319 (55%), Positives = 223/319 (69%), Gaps = 23/319 (7%)
 Frame = -2

Query: 891 MAQNSSRLHRLLTLLDTGSTQATRLAAARQIGDIAKLYPQDLNSLLKK------------ 748
           M+  SSRLHRLLTLLDTGSTQATRL AARQIGDIAK +PQDLNSLL+K            
Sbjct: 1   MSHQSSRLHRLLTLLDTGSTQATRLTAARQIGDIAKSHPQDLNSLLRKEASRYSLLKSST 60

Query: 747 VSGYLRSKNWDTRVXXXXXXXXXAENVKHISVKELFGCIEAEMADAGFPDASKDMGILWS 568
           VS YLRSKNWDTRV         AENVKH S+ ELF C+   M++AG     +D+ + W 
Sbjct: 61  VSQYLRSKNWDTRVAAAHAIGAIAENVKHSSLSELFACVGKRMSEAGISGEVEDV-VAWP 119

Query: 567 NFTPNVVAGLSFRSFDINKVLEFGSPLLASGGQEYDVASDSSKNPAERLHLQKQNLRRRL 388
           ++ P ++AG  FRSFDINKVLEFG+ LLASGGQEYD+ASD++KNP +RL  QKQNLRRRL
Sbjct: 120 DYHPKIMAGSPFRSFDINKVLEFGA-LLASGGQEYDIASDNTKNPRDRLARQKQNLRRRL 178

Query: 387 GLDVCEQFMDVSDVIRDEDLVTQRGPYAANGVLHGYYGPQSRQNIHQLVAKMAPSYVRRR 208
           GLD+CEQFMDV+D+IRDEDL+  +     NG+ + +   QS  +I +LVA M P+ + +R
Sbjct: 179 GLDMCEQFMDVNDMIRDEDLIVHKFNPQGNGIDNRFNNSQSVHSIQRLVANMVPTIISKR 238

Query: 207 LSARELNILKRKAKVNAKDHPSSMAPSGASS-----------DTQGANKVIMDDFVDEDS 61
            SARELN+LKRKAK+N+KD     +  G ++           ++  ++KV MD  VDED+
Sbjct: 239 PSARELNLLKRKAKINSKDQTKGWSEDGDTAEVLTTPKESCPESLHSDKVFMDPIVDEDN 298

Query: 60  NEHDGSGAWPFSSFVEQLI 4
            +HDG G WPF SFVEQL+
Sbjct: 299 FDHDGDGRWPFHSFVEQLL 317


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