BLASTX nr result

ID: Dioscorea21_contig00017282 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017282
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513189.1| arginine/serine rich splicing factor sf4/14,...    62   4e-08
ref|XP_003633593.1| PREDICTED: SURP and G-patch domain-containin...    62   5e-08
ref|XP_003633594.1| PREDICTED: SURP and G-patch domain-containin...    62   5e-08
emb|CAN62489.1| hypothetical protein VITISV_035536 [Vitis vinifera]    62   5e-08
tpg|DAA63277.1| TPA: gamma response I protein [Zea mays]               62   6e-08

>ref|XP_002513189.1| arginine/serine rich splicing factor sf4/14, putative [Ricinus
           communis] gi|223547687|gb|EEF49180.1| arginine/serine
           rich splicing factor sf4/14, putative [Ricinus communis]
          Length = 441

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 41/89 (46%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
 Frame = +2

Query: 2   DYKYYEQRLLEEERILAQAKDXXXXXXXXXXXXIPR-ASNSHRSPVQQPSNYQTPASALY 178
           DYKYYE RL EEER L+Q  D              + +S S RS  QQP NYQ PASALY
Sbjct: 189 DYKYYEFRLAEEERALSQTGDSENSPSGATSPSASKFSSGSQRSHQQQP-NYQIPASALY 247

Query: 179 ECNNDPVSSHASAGKSSI-YDGESSGRSP 262
           +  ++P  S  SA  +S+   G+SSG  P
Sbjct: 248 DATDEPGGSLTSAQIASVGRAGDSSGTDP 276


>ref|XP_003633593.1| PREDICTED: SURP and G-patch domain-containing protein 1-like
           protein-like isoform 1 [Vitis vinifera]
          Length = 459

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 40/98 (40%), Positives = 54/98 (55%), Gaps = 6/98 (6%)
 Frame = +2

Query: 2   DYKYYEQRLLEEERILAQAKDXXXXXXXXXXXX-IPRASNSHRSPVQQPSNYQTPASALY 178
           DYKYYE RL EEE+ L+Q +D              P++++  +  VQQ SNYQ P SALY
Sbjct: 204 DYKYYEYRLAEEEKTLSQTRDSQTSQSGGGTSTSAPKSTSGSQRSVQQRSNYQIPTSALY 263

Query: 179 ECNNDPVSSHAS-----AGKSSIYDGESSGRSPSDRIA 277
           E   D  +S +S     AG++    GESS  + +D IA
Sbjct: 264 EATEDTRASGSSVQAALAGRAGY--GESSAPTGADPIA 299


>ref|XP_003633594.1| PREDICTED: SURP and G-patch domain-containing protein 1-like
           protein-like isoform 2 [Vitis vinifera]
           gi|297736220|emb|CBI24858.3| unnamed protein product
           [Vitis vinifera]
          Length = 444

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 40/98 (40%), Positives = 54/98 (55%), Gaps = 6/98 (6%)
 Frame = +2

Query: 2   DYKYYEQRLLEEERILAQAKDXXXXXXXXXXXX-IPRASNSHRSPVQQPSNYQTPASALY 178
           DYKYYE RL EEE+ L+Q +D              P++++  +  VQQ SNYQ P SALY
Sbjct: 189 DYKYYEYRLAEEEKTLSQTRDSQTSQSGGGTSTSAPKSTSGSQRSVQQRSNYQIPTSALY 248

Query: 179 ECNNDPVSSHAS-----AGKSSIYDGESSGRSPSDRIA 277
           E   D  +S +S     AG++    GESS  + +D IA
Sbjct: 249 EATEDTRASGSSVQAALAGRAGY--GESSAPTGADPIA 284


>emb|CAN62489.1| hypothetical protein VITISV_035536 [Vitis vinifera]
          Length = 473

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 40/98 (40%), Positives = 54/98 (55%), Gaps = 6/98 (6%)
 Frame = +2

Query: 2   DYKYYEQRLLEEERILAQAKDXXXXXXXXXXXX-IPRASNSHRSPVQQPSNYQTPASALY 178
           DYKYYE RL EEE+ L+Q +D              P++++  +  VQQ SNYQ P SALY
Sbjct: 189 DYKYYEYRLAEEEKTLSQTRDSQTSQSGGGTSTSAPKSTSGSQRSVQQRSNYQIPTSALY 248

Query: 179 ECNNDPVSSHAS-----AGKSSIYDGESSGRSPSDRIA 277
           E   D  +S +S     AG++    GESS  + +D IA
Sbjct: 249 EATEDTRASGSSVQAALAGRAGY--GESSAPTGADPIA 284


>tpg|DAA63277.1| TPA: gamma response I protein [Zea mays]
          Length = 410

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 38/92 (41%), Positives = 48/92 (52%)
 Frame = +2

Query: 2   DYKYYEQRLLEEERILAQAKDXXXXXXXXXXXXIPRASNSHRSPVQQPSNYQTPASALYE 181
           DYKYYE +L EEER LAQ+K+                  ++RS  +Q SNYQTPASALY 
Sbjct: 165 DYKYYEFQLAEEERALAQSKEAEASKANSGTASFKAPGGTYRSSFEQKSNYQTPASALY- 223

Query: 182 CNNDPVSSHASAGKSSIYDGESSGRSPSDRIA 277
                    +S G SS Y   ++   PSD +A
Sbjct: 224 ---GAYEGSSSQGSSSSYGDHTA--PPSDPVA 250


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