BLASTX nr result

ID: Dioscorea21_contig00017279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017279
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002452603.1| hypothetical protein SORBIDRAFT_04g028870 [S...    62   6e-08
gb|ACG40240.1| 50S ribosomal protein L17 [Zea mays]                    62   6e-08
ref|NP_001150751.1| LOC100284384 [Zea mays] gi|195641492|gb|ACG4...    62   6e-08
gb|ACG35970.1| 50S ribosomal protein L17 [Zea mays]                    62   6e-08
ref|NP_001240907.1| uncharacterized protein LOC100785280 [Glycin...    61   8e-08

>ref|XP_002452603.1| hypothetical protein SORBIDRAFT_04g028870 [Sorghum bicolor]
           gi|241932434|gb|EES05579.1| hypothetical protein
           SORBIDRAFT_04g028870 [Sorghum bicolor]
          Length = 161

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/40 (67%), Positives = 30/40 (75%)
 Frame = -3

Query: 241 REAKAPAPQPPQRTPLDPWKKSQASKQWASPKEEKTSSSE 122
           REAK   P PPQR PLDPW KS+AS+QWA PK  KTS S+
Sbjct: 120 REAKPATPPPPQRVPLDPWTKSRASQQWAGPKITKTSESD 159


>gb|ACG40240.1| 50S ribosomal protein L17 [Zea mays]
          Length = 161

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/40 (67%), Positives = 30/40 (75%)
 Frame = -3

Query: 241 REAKAPAPQPPQRTPLDPWKKSQASKQWASPKEEKTSSSE 122
           REAK   P PPQR PLDPW KS+AS+QWA PK  KTS S+
Sbjct: 120 REAKPATPPPPQRAPLDPWAKSRASQQWAGPKITKTSESD 159


>ref|NP_001150751.1| LOC100284384 [Zea mays] gi|195641492|gb|ACG40214.1| 50S ribosomal
           protein L17 [Zea mays]
          Length = 161

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/40 (67%), Positives = 30/40 (75%)
 Frame = -3

Query: 241 REAKAPAPQPPQRTPLDPWKKSQASKQWASPKEEKTSSSE 122
           REAK   P PPQR PLDPW KS+AS+QWA PK  KTS S+
Sbjct: 120 REAKPATPPPPQRVPLDPWAKSRASQQWAGPKITKTSESD 159


>gb|ACG35970.1| 50S ribosomal protein L17 [Zea mays]
          Length = 175

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/40 (67%), Positives = 30/40 (75%)
 Frame = -3

Query: 241 REAKAPAPQPPQRTPLDPWKKSQASKQWASPKEEKTSSSE 122
           REAK   P PPQR PLDPW KS+AS+QWA PK  KTS S+
Sbjct: 134 REAKPATPPPPQRVPLDPWAKSRASQQWAGPKITKTSESD 173


>ref|NP_001240907.1| uncharacterized protein LOC100785280 [Glycine max]
           gi|255640336|gb|ACU20456.1| unknown [Glycine max]
          Length = 159

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 25/38 (65%), Positives = 32/38 (84%)
 Frame = -3

Query: 241 REAKAPAPQPPQRTPLDPWKKSQASKQWASPKEEKTSS 128
           R+AKAP PQPPQR PLDPW +S+ S+Q+A PKE+K+ S
Sbjct: 120 RQAKAPTPQPPQRAPLDPWARSRLSRQFAPPKEDKSGS 157


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