BLASTX nr result

ID: Dioscorea21_contig00017278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017278
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK06308.1| predicted protein [Hordeum vulgare subsp. vulgare]    186   1e-45
ref|XP_002873421.1| ribosomal protein L17 family protein [Arabid...   185   3e-45
ref|XP_002866626.1| ribosomal protein L17 family protein [Arabid...   185   3e-45
ref|XP_003564575.1| PREDICTED: 50S ribosomal protein L17-like [B...   184   7e-45
ref|XP_002281739.1| PREDICTED: 50S ribosomal protein L17 [Vitis ...   184   7e-45

>dbj|BAK06308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 161

 Score =  186 bits (473), Expect = 1e-45
 Identities = 94/105 (89%), Positives = 102/105 (97%)
 Frame = +3

Query: 84  MGNFRKLGRPAAHRLSMLRTMVSQLVKHERIETTVAKAKEVRRVADRMVQLGKEGTLAAS 263
           MGNFRKLGR AAHR+SMLRTMVSQLVKHERIETTVAKAKEVRR AD+MVQLGK+GTL A+
Sbjct: 1   MGNFRKLGRHAAHRVSMLRTMVSQLVKHERIETTVAKAKEVRRKADQMVQLGKDGTLDAA 60

Query: 264 RRAAAFVRGDDVLHKLFSELAYRYKDRAGGYTRLLRTRIRMGDAA 398
           RRA+AFVRGDDV+HKLF+ELAYRYKDRAGGYTRLLRTRIR+GDAA
Sbjct: 61  RRASAFVRGDDVVHKLFTELAYRYKDRAGGYTRLLRTRIRIGDAA 105


>ref|XP_002873421.1| ribosomal protein L17 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297319258|gb|EFH49680.1| ribosomal protein
           L17 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 160

 Score =  185 bits (470), Expect = 3e-45
 Identities = 92/105 (87%), Positives = 99/105 (94%)
 Frame = +3

Query: 84  MGNFRKLGRPAAHRLSMLRTMVSQLVKHERIETTVAKAKEVRRVADRMVQLGKEGTLAAS 263
           M  FRKLGRPA HR+SMLRTMVSQLVKHERIETTV KAKEVRR+AD MVQLGKEGTLAA+
Sbjct: 1   MTKFRKLGRPAGHRMSMLRTMVSQLVKHERIETTVTKAKEVRRLADNMVQLGKEGTLAAA 60

Query: 264 RRAAAFVRGDDVLHKLFSELAYRYKDRAGGYTRLLRTRIRMGDAA 398
           RRAA FVRGDDVLHK+F+ELAYRYKDRAGGYTR+LRTRIR+GDAA
Sbjct: 61  RRAAGFVRGDDVLHKIFTELAYRYKDRAGGYTRMLRTRIRVGDAA 105


>ref|XP_002866626.1| ribosomal protein L17 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297312461|gb|EFH42885.1| ribosomal protein
           L17 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 160

 Score =  185 bits (470), Expect = 3e-45
 Identities = 92/105 (87%), Positives = 100/105 (95%)
 Frame = +3

Query: 84  MGNFRKLGRPAAHRLSMLRTMVSQLVKHERIETTVAKAKEVRRVADRMVQLGKEGTLAAS 263
           M  FRKLGRPA HR+SMLRTMVSQLVKHERIETTVAKAKEVRR+AD MVQLGKEG+LAA+
Sbjct: 1   MTKFRKLGRPAGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLAAA 60

Query: 264 RRAAAFVRGDDVLHKLFSELAYRYKDRAGGYTRLLRTRIRMGDAA 398
           RRAA FVRGDDVLHK+F+ELAYRYKDRAGGYTR+LRTRIR+GDAA
Sbjct: 61  RRAAGFVRGDDVLHKIFTELAYRYKDRAGGYTRMLRTRIRVGDAA 105


>ref|XP_003564575.1| PREDICTED: 50S ribosomal protein L17-like [Brachypodium distachyon]
          Length = 161

 Score =  184 bits (467), Expect = 7e-45
 Identities = 93/105 (88%), Positives = 101/105 (96%)
 Frame = +3

Query: 84  MGNFRKLGRPAAHRLSMLRTMVSQLVKHERIETTVAKAKEVRRVADRMVQLGKEGTLAAS 263
           MG FRKLGR AAHR+SMLRTMVSQLVKHERIETTVAKAKEVRR AD+MVQLGK+GTL A+
Sbjct: 1   MGKFRKLGRHAAHRVSMLRTMVSQLVKHERIETTVAKAKEVRRKADQMVQLGKDGTLDAA 60

Query: 264 RRAAAFVRGDDVLHKLFSELAYRYKDRAGGYTRLLRTRIRMGDAA 398
           RRA+AFVRGDDV+HKLF+ELAYRYKDRAGGYTRLLRTRIR+GDAA
Sbjct: 61  RRASAFVRGDDVVHKLFTELAYRYKDRAGGYTRLLRTRIRIGDAA 105


>ref|XP_002281739.1| PREDICTED: 50S ribosomal protein L17 [Vitis vinifera]
           gi|296088573|emb|CBI37564.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  184 bits (467), Expect = 7e-45
 Identities = 91/105 (86%), Positives = 99/105 (94%)
 Frame = +3

Query: 84  MGNFRKLGRPAAHRLSMLRTMVSQLVKHERIETTVAKAKEVRRVADRMVQLGKEGTLAAS 263
           M  FRKLGRP  HR+SMLRTMVSQLVKHERIETTVAKAKE+RR+AD MVQLGKEG+L A+
Sbjct: 1   MTKFRKLGRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEIRRLADNMVQLGKEGSLCAA 60

Query: 264 RRAAAFVRGDDVLHKLFSELAYRYKDRAGGYTRLLRTRIRMGDAA 398
           RRAAAFVRGDDV+HKLF+ELAYRYKDRAGGYTRLLRTRIR+GDAA
Sbjct: 61  RRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRTRIRVGDAA 105


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