BLASTX nr result

ID: Dioscorea21_contig00017228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017228
         (634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_680734.1| endonuclease 4 [Arabidopsis thaliana] gi|391359...   205   6e-51
emb|CBI18600.3| unnamed protein product [Vitis vinifera]              202   3e-50
ref|XP_002269258.1| PREDICTED: nuclease S1 [Vitis vinifera]           202   3e-50
ref|XP_002869881.1| hypothetical protein ARALYDRAFT_492719 [Arab...   202   5e-50
ref|XP_002317238.1| predicted protein [Populus trichocarpa] gi|2...   200   2e-49

>ref|NP_680734.1| endonuclease 4 [Arabidopsis thaliana]
           gi|391359266|sp|F4JJL0.1|ENDO4_ARATH RecName:
           Full=Endonuclease 4; Short=AtENDO4; AltName:
           Full=Deoxyribonuclease ENDO4; AltName:
           Full=Single-stranded-nucleate endonuclease ENDO4; Flags:
           Precursor gi|332659076|gb|AEE84476.1| endonuclease 4
           [Arabidopsis thaliana]
          Length = 299

 Score =  205 bits (521), Expect = 6e-51
 Identities = 93/136 (68%), Positives = 113/136 (83%), Gaps = 1/136 (0%)
 Frame = -1

Query: 634 PLHCGFLGDEGGNTIILHWYRRKSNLHHVWDTLIIETALKKY-NMDLSMMIEDIRTSIQE 458
           PLH GFLGDEGGNTI + WYRRK+NLHHVWD +IIE+ALK Y N  L +MIE ++ ++  
Sbjct: 155 PLHVGFLGDEGGNTITVRWYRRKTNLHHVWDNMIIESALKTYYNKSLPLMIEALQANLTN 214

Query: 457 DWPSDVRAWESCGVNQTVCPNWYAAESISLACKFVYKNASPGSTLGDDYFFTRMPHVRKR 278
           DW +DV  WESC +NQT CPN YA+ESI+LACK+ Y+NA+PG+TLGDDYF +R+P V KR
Sbjct: 215 DWSNDVPLWESCQLNQTACPNPYASESINLACKYAYRNATPGTTLGDDYFLSRLPIVEKR 274

Query: 277 LAQGGVRLAATLNRIF 230
           LAQGG+RLAATLNRIF
Sbjct: 275 LAQGGIRLAATLNRIF 290


>emb|CBI18600.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score =  202 bits (515), Expect = 3e-50
 Identities = 91/139 (65%), Positives = 114/139 (82%), Gaps = 1/139 (0%)
 Frame = -1

Query: 634 PLHCGFLGDEGGNTIILHWYRRKSNLHHVWDTLIIETALKKY-NMDLSMMIEDIRTSIQE 458
           PLH GF GDEGGNTII+ WYRRK+NLHH+WD +II++ALK Y N DL++MI+ I+ +I  
Sbjct: 155 PLHVGFTGDEGGNTIIVRWYRRKTNLHHIWDNMIIDSALKTYYNSDLAIMIQAIQRNITG 214

Query: 457 DWPSDVRAWESCGVNQTVCPNWYAAESISLACKFVYKNASPGSTLGDDYFFTRMPHVRKR 278
           DW  D+ +W++C  + T CPN YA+ESISLACKF Y+NA+PGSTLGDDYF +R+P V KR
Sbjct: 215 DWSFDISSWKNCASDDTACPNLYASESISLACKFAYRNATPGSTLGDDYFLSRLPIVEKR 274

Query: 277 LAQGGVRLAATLNRIFIGE 221
           LAQGG+RLAATLNRIF  +
Sbjct: 275 LAQGGIRLAATLNRIFASQ 293


>ref|XP_002269258.1| PREDICTED: nuclease S1 [Vitis vinifera]
          Length = 323

 Score =  202 bits (515), Expect = 3e-50
 Identities = 91/139 (65%), Positives = 114/139 (82%), Gaps = 1/139 (0%)
 Frame = -1

Query: 634 PLHCGFLGDEGGNTIILHWYRRKSNLHHVWDTLIIETALKKY-NMDLSMMIEDIRTSIQE 458
           PLH GF GDEGGNTII+ WYRRK+NLHH+WD +II++ALK Y N DL++MI+ I+ +I  
Sbjct: 155 PLHVGFTGDEGGNTIIVRWYRRKTNLHHIWDNMIIDSALKTYYNSDLAIMIQAIQRNITG 214

Query: 457 DWPSDVRAWESCGVNQTVCPNWYAAESISLACKFVYKNASPGSTLGDDYFFTRMPHVRKR 278
           DW  D+ +W++C  + T CPN YA+ESISLACKF Y+NA+PGSTLGDDYF +R+P V KR
Sbjct: 215 DWSFDISSWKNCASDDTACPNLYASESISLACKFAYRNATPGSTLGDDYFLSRLPIVEKR 274

Query: 277 LAQGGVRLAATLNRIFIGE 221
           LAQGG+RLAATLNRIF  +
Sbjct: 275 LAQGGIRLAATLNRIFASQ 293


>ref|XP_002869881.1| hypothetical protein ARALYDRAFT_492719 [Arabidopsis lyrata subsp.
           lyrata] gi|297315717|gb|EFH46140.1| hypothetical protein
           ARALYDRAFT_492719 [Arabidopsis lyrata subsp. lyrata]
          Length = 299

 Score =  202 bits (513), Expect = 5e-50
 Identities = 91/136 (66%), Positives = 113/136 (83%), Gaps = 1/136 (0%)
 Frame = -1

Query: 634 PLHCGFLGDEGGNTIILHWYRRKSNLHHVWDTLIIETALKKY-NMDLSMMIEDIRTSIQE 458
           PLH GFLGDEGGNTI + WYRRK+NLHHVWD +IIE+ALK Y N  L + I+ ++T++  
Sbjct: 155 PLHVGFLGDEGGNTITVRWYRRKTNLHHVWDNMIIESALKTYYNKSLPLFIQALQTNLTH 214

Query: 457 DWPSDVRAWESCGVNQTVCPNWYAAESISLACKFVYKNASPGSTLGDDYFFTRMPHVRKR 278
            W +DV +WESC +NQT CPN YA+ESI+LACK+ Y+NA+PG+TLGDDYF +R+P V KR
Sbjct: 215 GWSNDVPSWESCQLNQTACPNPYASESINLACKYAYRNATPGTTLGDDYFLSRLPIVEKR 274

Query: 277 LAQGGVRLAATLNRIF 230
           LAQGG+RLAATLNRIF
Sbjct: 275 LAQGGIRLAATLNRIF 290


>ref|XP_002317238.1| predicted protein [Populus trichocarpa] gi|222860303|gb|EEE97850.1|
           predicted protein [Populus trichocarpa]
          Length = 297

 Score =  200 bits (508), Expect = 2e-49
 Identities = 96/136 (70%), Positives = 109/136 (80%), Gaps = 1/136 (0%)
 Frame = -1

Query: 634 PLHCGFLGDEGGNTIILHWYRRKSNLHHVWDTLIIETALKK-YNMDLSMMIEDIRTSIQE 458
           PLH GFLGD GGNTI +HWYRRKSNLHHVWD +IIE+ALK  Y+ DL+ MI  I+ +I E
Sbjct: 153 PLHVGFLGDLGGNTIQVHWYRRKSNLHHVWDNMIIESALKTFYSSDLATMIRAIQNNITE 212

Query: 457 DWPSDVRAWESCGVNQTVCPNWYAAESISLACKFVYKNASPGSTLGDDYFFTRMPHVRKR 278
           +W +    WE C  N TVCPN YA+ESISLACKF YKNASPGSTL DDYF +R+P V KR
Sbjct: 213 NWSNQQPLWEHCAHNHTVCPNPYASESISLACKFAYKNASPGSTLEDDYFLSRLPVVEKR 272

Query: 277 LAQGGVRLAATLNRIF 230
           LAQGG+RLAATLNRIF
Sbjct: 273 LAQGGIRLAATLNRIF 288


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