BLASTX nr result
ID: Dioscorea21_contig00017184
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00017184
(1703 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003577435.1| PREDICTED: DNA-directed RNA polymerase D sub... 614 e-173
ref|XP_003564776.1| PREDICTED: DNA-directed RNA polymerase D sub... 611 e-172
gb|EEE61785.1| hypothetical protein OsJ_16357 [Oryza sativa Japo... 609 e-172
gb|EEC78111.1| hypothetical protein OsI_17620 [Oryza sativa Indi... 609 e-172
ref|NP_001054041.1| Os04g0641000 [Oryza sativa Japonica Group] g... 609 e-172
>ref|XP_003577435.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like
[Brachypodium distachyon]
Length = 1213
Score = 614 bits (1584), Expect = e-173
Identities = 290/477 (60%), Positives = 363/477 (76%)
Frame = -2
Query: 1432 GSVMGDLVKGQPSSDPMDLDTPNGDTEPLDINIGALEKFCKDAARAFFNEQGLISHQINS 1253
GS D GQ S D + G+ P D+N+ +LEKFCK+A+R+FF E GLISHQINS
Sbjct: 31 GSHTMDDSNGQSSMDIDIEGSSMGEQIPADMNLTSLEKFCKEASRSFFEEIGLISHQINS 90
Query: 1252 FNEFISEGIQNLFDSLGEVNVEPGYDPSKKGASDWRHATFSFGKVTLEKPKFWTGSSDIT 1073
+NEFIS G+Q LFDSLGEV VEPGYDPSKKG WRHA FGKV LE+P FW+G DI
Sbjct: 91 YNEFISHGLQELFDSLGEVTVEPGYDPSKKGPGGWRHAIIKFGKVKLEEPVFWSGKIDID 150
Query: 1072 EEFTKFMPRHARLQNMTYSSLMKVEVRLQVYTHERSDKAKTGNETYVRRRVLSDETEEMI 893
EE K PRHARLQNMTYSS M+VEV +QVY+ E+SDKAKTGN+ + +R + +ET +
Sbjct: 151 EESLKLKPRHARLQNMTYSSKMEVEVNIQVYSMEKSDKAKTGNDHFGHKRDIINETHWVT 210
Query: 892 MGRIPVMVQSDLCWLHSSNKSDCLFDHGGYFLIKGAEKAFIAQEQRCSTRLWVTDTPTWT 713
+GR+PVMV SDLCWLH +SDCLFD GGYFLIKG EK FIAQEQRC TR+WV D P W
Sbjct: 211 IGRLPVMVNSDLCWLHKLGESDCLFDSGGYFLIKGMEKIFIAQEQRCLTRIWVADQPCWN 270
Query: 712 VQFQSQFKRKRVYVKLVDAPKAEGYTAGKVVNAYYLYATVPIWIMFFALGASSDKEVVQM 533
V + S+ KR+RVY+KL+D+ K+++ +LYA +PIW++FFALG SSDKEV M
Sbjct: 271 VSYLSEMKRRRVYIKLIDSTTNNDLNGAKIISISFLYANMPIWLLFFALGVSSDKEVFDM 330
Query: 532 IDLEDCDTELLNIILATIKDADEQCEGFRKGEVAREYVHGLIKSSKFPPSETFDECISTY 353
ID++DCD ++N I ATI+++DE CEGFR+ + AR+YV L+KSSKFPP+E F + ++ Y
Sbjct: 331 IDMKDCDASVINAIYATIRESDELCEGFRQSDKARKYVDDLVKSSKFPPAEPFTDYVAKY 390
Query: 352 LFPTITGCREKALFLGYMVKCMLLAYAGKRKLDNKDDFRNKRLDLAGELLSRELWVHIRH 173
LFP I+G R K+ FLGYMVKC+L+A+ GKRK DNKDDFRNKRL+L G+LL REL H+RH
Sbjct: 391 LFPGISGNRNKSFFLGYMVKCLLMAFTGKRKCDNKDDFRNKRLELPGQLLGRELRAHLRH 450
Query: 172 LERYMIKKIQKDLYGDKDLKWEEKYLDASIITNGLKRAFSTGSWCHPYKKTERCSGV 2
ER M+K +Q+DL D+DL++ +YLDASIITNG+ RAF+TGSW HPY + ERCSG+
Sbjct: 451 AERLMVKAMQRDLNSDRDLQFPLRYLDASIITNGINRAFATGSWSHPYIRNERCSGI 507
>ref|XP_003564776.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like
[Brachypodium distachyon]
Length = 1213
Score = 611 bits (1575), Expect = e-172
Identities = 286/468 (61%), Positives = 359/468 (76%)
Frame = -2
Query: 1405 GQPSSDPMDLDTPNGDTEPLDINIGALEKFCKDAARAFFNEQGLISHQINSFNEFISEGI 1226
GQ S D + G+ P D+N+ +LEKFCK+A+R+FF E GLISHQINS+NEF+S G+
Sbjct: 40 GQSSMDIDIEGSSMGEQIPADMNLTSLEKFCKEASRSFFEEIGLISHQINSYNEFVSHGL 99
Query: 1225 QNLFDSLGEVNVEPGYDPSKKGASDWRHATFSFGKVTLEKPKFWTGSSDITEEFTKFMPR 1046
Q LFDSLGEV VEPGYDPSKKG WRHA FGKV LE+P FW+G I EE K PR
Sbjct: 100 QELFDSLGEVTVEPGYDPSKKGPGGWRHAIIKFGKVKLEEPVFWSGKIGIDEESLKLKPR 159
Query: 1045 HARLQNMTYSSLMKVEVRLQVYTHERSDKAKTGNETYVRRRVLSDETEEMIMGRIPVMVQ 866
HARLQNMTYSS M+VEV +QVY+ E+SDKAKTGN+ + +R + +ET + +GR+PVMV
Sbjct: 160 HARLQNMTYSSKMEVEVNIQVYSMEKSDKAKTGNDHFGHKRDIINETHWVTIGRLPVMVN 219
Query: 865 SDLCWLHSSNKSDCLFDHGGYFLIKGAEKAFIAQEQRCSTRLWVTDTPTWTVQFQSQFKR 686
SDLCWLH +SDCLFD GGYFLIKG EK FIAQEQRC TR+WV D P W V + S+ KR
Sbjct: 220 SDLCWLHKLGESDCLFDSGGYFLIKGMEKIFIAQEQRCLTRIWVADRPCWNVSYLSEMKR 279
Query: 685 KRVYVKLVDAPKAEGYTAGKVVNAYYLYATVPIWIMFFALGASSDKEVVQMIDLEDCDTE 506
+RVY+KL+D+ K+++ +LYA +PIW++FFALG SSDKEV MID++DCD
Sbjct: 280 RRVYIKLIDSTTNNDLNGAKIISISFLYANMPIWLLFFALGVSSDKEVFDMIDMKDCDAS 339
Query: 505 LLNIILATIKDADEQCEGFRKGEVAREYVHGLIKSSKFPPSETFDECISTYLFPTITGCR 326
++N I ATI+++DE CEGFR+ + AR+YV L+KSSKFPP+E F + ++ YLFP I+G R
Sbjct: 340 VINAISATIRESDELCEGFRQSDKARKYVDDLVKSSKFPPAEPFTDYVAKYLFPGISGNR 399
Query: 325 EKALFLGYMVKCMLLAYAGKRKLDNKDDFRNKRLDLAGELLSRELWVHIRHLERYMIKKI 146
KA FLGYMVKC+L+A+ GKRK DNKDDFRNKRL+L G+LL REL H+RH ER M+K +
Sbjct: 400 NKAFFLGYMVKCLLMAFTGKRKCDNKDDFRNKRLELPGQLLGRELRAHLRHAERLMVKAM 459
Query: 145 QKDLYGDKDLKWEEKYLDASIITNGLKRAFSTGSWCHPYKKTERCSGV 2
Q+DL D+DL++ +YLDASIITNG+ RAF+TGSW HPY + ERCSG+
Sbjct: 460 QRDLNSDRDLQFPLRYLDASIITNGINRAFATGSWSHPYIRNERCSGI 507
>gb|EEE61785.1| hypothetical protein OsJ_16357 [Oryza sativa Japonica Group]
Length = 1185
Score = 609 bits (1571), Expect = e-172
Identities = 283/450 (62%), Positives = 357/450 (79%)
Frame = -2
Query: 1351 PLDINIGALEKFCKDAARAFFNEQGLISHQINSFNEFISEGIQNLFDSLGEVNVEPGYDP 1172
P+D++I +LEKFCK+A+R+FF+E GLISHQINS+NEF+S G+Q LFDSLGEV VEP YDP
Sbjct: 75 PVDMSIPSLEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVEPSYDP 134
Query: 1171 SKKGASDWRHATFSFGKVTLEKPKFWTGSSDITEEFTKFMPRHARLQNMTYSSLMKVEVR 992
S +G WRHA FG+V LE+P FW+ DI E+ K PRHARLQNMTYSS MKVEV
Sbjct: 135 SNRGPGGWRHAIIKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKMKVEVH 194
Query: 991 LQVYTHERSDKAKTGNETYVRRRVLSDETEEMIMGRIPVMVQSDLCWLHSSNKSDCLFDH 812
QVY+ E+SDKAKTGN+ + +R + +ET + +GR+PVMV S+LCWLH +SDC FD
Sbjct: 195 FQVYSMEKSDKAKTGNDKFGYKRNIINETYYINIGRLPVMVMSNLCWLHKLKESDCQFDS 254
Query: 811 GGYFLIKGAEKAFIAQEQRCSTRLWVTDTPTWTVQFQSQFKRKRVYVKLVDAPKAEGYTA 632
GGYFLIKG EK FIAQEQ+C TR+WV D P W V F S +R+R+Y+KL+D+ E +
Sbjct: 255 GGYFLIKGMEKVFIAQEQKCLTRIWVEDRPCWMVSFLSPIRRRRIYIKLIDSANNEDASG 314
Query: 631 GKVVNAYYLYATVPIWIMFFALGASSDKEVVQMIDLEDCDTELLNIILATIKDADEQCEG 452
GK+++ +LYA +PIW+MFFALG SSDK++ +I++EDCD ++N I ATIK++DE CEG
Sbjct: 315 GKIISISFLYANMPIWLMFFALGISSDKDIFDVINMEDCDACVINTITATIKESDELCEG 374
Query: 451 FRKGEVAREYVHGLIKSSKFPPSETFDECISTYLFPTITGCREKALFLGYMVKCMLLAYA 272
FRK + AR+YV LIK+SKFPP+E FD+ I+ YLFP+I+G R KALFLGYMVKC+L+A+
Sbjct: 375 FRKSDKARQYVDELIKNSKFPPAEPFDDYIAKYLFPSISGNRNKALFLGYMVKCLLMAFT 434
Query: 271 GKRKLDNKDDFRNKRLDLAGELLSRELWVHIRHLERYMIKKIQKDLYGDKDLKWEEKYLD 92
GKRK DNKDDFRNKRLDLAGELL REL HIRH ER M+K +Q+DL +++L+ + YLD
Sbjct: 435 GKRKCDNKDDFRNKRLDLAGELLGRELRAHIRHAERLMVKALQRDLNSERELQEFDHYLD 494
Query: 91 ASIITNGLKRAFSTGSWCHPYKKTERCSGV 2
ASIITNGL RAFSTGSWCHPYK+ ERC+G+
Sbjct: 495 ASIITNGLNRAFSTGSWCHPYKRNERCAGI 524
>gb|EEC78111.1| hypothetical protein OsI_17620 [Oryza sativa Indica Group]
Length = 1177
Score = 609 bits (1571), Expect = e-172
Identities = 283/450 (62%), Positives = 357/450 (79%)
Frame = -2
Query: 1351 PLDINIGALEKFCKDAARAFFNEQGLISHQINSFNEFISEGIQNLFDSLGEVNVEPGYDP 1172
P+D++I +LEKFCK+A+R+FF+E GLISHQINS+NEF+S G+Q LFDSLGEV VEP YDP
Sbjct: 75 PVDMSIPSLEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVEPSYDP 134
Query: 1171 SKKGASDWRHATFSFGKVTLEKPKFWTGSSDITEEFTKFMPRHARLQNMTYSSLMKVEVR 992
S +G WRHA FG+V LE+P FW+ DI E+ K PRHARLQNMTYSS MKVEV
Sbjct: 135 SNRGPGGWRHAIIKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKMKVEVH 194
Query: 991 LQVYTHERSDKAKTGNETYVRRRVLSDETEEMIMGRIPVMVQSDLCWLHSSNKSDCLFDH 812
QVY+ E+SDKAKTGN+ + +R + +ET + +GR+PVMV S+LCWLH +SDC FD
Sbjct: 195 FQVYSMEKSDKAKTGNDKFGYKRNIINETYYINIGRLPVMVMSNLCWLHKLKESDCQFDS 254
Query: 811 GGYFLIKGAEKAFIAQEQRCSTRLWVTDTPTWTVQFQSQFKRKRVYVKLVDAPKAEGYTA 632
GGYFLIKG EK FIAQEQ+C TR+WV D P W V F S +R+R+Y+KL+D+ E +
Sbjct: 255 GGYFLIKGMEKVFIAQEQKCLTRIWVEDRPCWMVSFLSPIRRRRIYIKLIDSANNEDASG 314
Query: 631 GKVVNAYYLYATVPIWIMFFALGASSDKEVVQMIDLEDCDTELLNIILATIKDADEQCEG 452
GK+++ +LYA +PIW+MFFALG SSDK++ +I++EDCD ++N I ATIK++DE CEG
Sbjct: 315 GKIISISFLYANMPIWLMFFALGISSDKDIFDVINMEDCDACVINTITATIKESDELCEG 374
Query: 451 FRKGEVAREYVHGLIKSSKFPPSETFDECISTYLFPTITGCREKALFLGYMVKCMLLAYA 272
FRK + AR+YV LIK+SKFPP+E FD+ I+ YLFP+I+G R KALFLGYMVKC+L+A+
Sbjct: 375 FRKSDKARQYVDELIKNSKFPPAEPFDDYIAKYLFPSISGNRNKALFLGYMVKCLLMAFT 434
Query: 271 GKRKLDNKDDFRNKRLDLAGELLSRELWVHIRHLERYMIKKIQKDLYGDKDLKWEEKYLD 92
GKRK DNKDDFRNKRLDLAGELL REL HIRH ER M+K +Q+DL +++L+ + YLD
Sbjct: 435 GKRKCDNKDDFRNKRLDLAGELLGRELRAHIRHAERLMVKALQRDLNSERELQEFDHYLD 494
Query: 91 ASIITNGLKRAFSTGSWCHPYKKTERCSGV 2
ASIITNGL RAFSTGSWCHPYK+ ERC+G+
Sbjct: 495 ASIITNGLNRAFSTGSWCHPYKRNERCAGI 524
>ref|NP_001054041.1| Os04g0641000 [Oryza sativa Japonica Group]
gi|113565612|dbj|BAF15955.1| Os04g0641000, partial [Oryza
sativa Japonica Group]
Length = 1270
Score = 609 bits (1571), Expect = e-172
Identities = 283/450 (62%), Positives = 357/450 (79%)
Frame = -2
Query: 1351 PLDINIGALEKFCKDAARAFFNEQGLISHQINSFNEFISEGIQNLFDSLGEVNVEPGYDP 1172
P+D++I +LEKFCK+A+R+FF+E GLISHQINS+NEF+S G+Q LFDSLGEV VEP YDP
Sbjct: 93 PVDMSIPSLEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVEPSYDP 152
Query: 1171 SKKGASDWRHATFSFGKVTLEKPKFWTGSSDITEEFTKFMPRHARLQNMTYSSLMKVEVR 992
S +G WRHA FG+V LE+P FW+ DI E+ K PRHARLQNMTYSS MKVEV
Sbjct: 153 SNRGPGGWRHAIIKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKMKVEVH 212
Query: 991 LQVYTHERSDKAKTGNETYVRRRVLSDETEEMIMGRIPVMVQSDLCWLHSSNKSDCLFDH 812
QVY+ E+SDKAKTGN+ + +R + +ET + +GR+PVMV S+LCWLH +SDC FD
Sbjct: 213 FQVYSMEKSDKAKTGNDKFGYKRNIINETYYINIGRLPVMVMSNLCWLHKLKESDCQFDS 272
Query: 811 GGYFLIKGAEKAFIAQEQRCSTRLWVTDTPTWTVQFQSQFKRKRVYVKLVDAPKAEGYTA 632
GGYFLIKG EK FIAQEQ+C TR+WV D P W V F S +R+R+Y+KL+D+ E +
Sbjct: 273 GGYFLIKGMEKVFIAQEQKCLTRIWVEDRPCWMVSFLSPIRRRRIYIKLIDSANNEDASG 332
Query: 631 GKVVNAYYLYATVPIWIMFFALGASSDKEVVQMIDLEDCDTELLNIILATIKDADEQCEG 452
GK+++ +LYA +PIW+MFFALG SSDK++ +I++EDCD ++N I ATIK++DE CEG
Sbjct: 333 GKIISISFLYANMPIWLMFFALGISSDKDIFDVINMEDCDACVINTITATIKESDELCEG 392
Query: 451 FRKGEVAREYVHGLIKSSKFPPSETFDECISTYLFPTITGCREKALFLGYMVKCMLLAYA 272
FRK + AR+YV LIK+SKFPP+E FD+ I+ YLFP+I+G R KALFLGYMVKC+L+A+
Sbjct: 393 FRKSDKARQYVDELIKNSKFPPAEPFDDYIAKYLFPSISGNRNKALFLGYMVKCLLMAFT 452
Query: 271 GKRKLDNKDDFRNKRLDLAGELLSRELWVHIRHLERYMIKKIQKDLYGDKDLKWEEKYLD 92
GKRK DNKDDFRNKRLDLAGELL REL HIRH ER M+K +Q+DL +++L+ + YLD
Sbjct: 453 GKRKCDNKDDFRNKRLDLAGELLGRELRAHIRHAERLMVKALQRDLNSERELQEFDHYLD 512
Query: 91 ASIITNGLKRAFSTGSWCHPYKKTERCSGV 2
ASIITNGL RAFSTGSWCHPYK+ ERC+G+
Sbjct: 513 ASIITNGLNRAFSTGSWCHPYKRNERCAGI 542