BLASTX nr result

ID: Dioscorea21_contig00017152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017152
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA48541.1| TPA: hypothetical protein ZEAMMB73_942409 [Zea m...    56   3e-06
tpg|DAA48540.1| TPA: hypothetical protein ZEAMMB73_942409 [Zea m...    56   3e-06
ref|XP_002530460.1| transcription cofactor, putative [Ricinus co...    56   3e-06

>tpg|DAA48541.1| TPA: hypothetical protein ZEAMMB73_942409 [Zea mays]
          Length = 559

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 10/97 (10%)
 Frame = +2

Query: 8   MSTSSMTVEYVGSDSDQVKETTE---KSSKRKRPTEFLIKAVQSAAPEVLDSSIKDITSM 178
           +S S +  E+  +D  QV   T+   KSS  +RP + L+KA+++  PE L +++ DI S+
Sbjct: 244 ISASPLLAEFTSADGGQVSVPTQVPTKSSAAERPLDRLLKALRTTQPESLSAAVSDIGSV 303

Query: 179 FD-LDILSSSAPGN------GQNLVERTKGFMSAQNY 268
              +D ++ SAPGN      G++LV  TK  + A+N+
Sbjct: 304 VSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNF 340


>tpg|DAA48540.1| TPA: hypothetical protein ZEAMMB73_942409 [Zea mays]
          Length = 560

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 10/97 (10%)
 Frame = +2

Query: 8   MSTSSMTVEYVGSDSDQVKETTE---KSSKRKRPTEFLIKAVQSAAPEVLDSSIKDITSM 178
           +S S +  E+  +D  QV   T+   KSS  +RP + L+KA+++  PE L +++ DI S+
Sbjct: 244 ISASPLLAEFTSADGGQVSVPTQVPTKSSAAERPLDRLLKALRTTQPESLSAAVSDIGSV 303

Query: 179 FD-LDILSSSAPGN------GQNLVERTKGFMSAQNY 268
              +D ++ SAPGN      G++LV  TK  + A+N+
Sbjct: 304 VSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNF 340


>ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis]
            gi|223530005|gb|EEF31930.1| transcription cofactor,
            putative [Ricinus communis]
          Length = 1382

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 35/97 (36%), Positives = 59/97 (60%), Gaps = 10/97 (10%)
 Frame = +2

Query: 8    MSTSSMTVEYVGSD---SDQVKETTEKSSKRKRPTEFLIKAVQSAAPEVLDSSIKDITSM 178
            +S S +  E+ GSD   ++ +   + KS+  ++P E LIKAV+S +P+ L +S+ DI S+
Sbjct: 1062 ISASPLLAEFTGSDVGLANTLTTASGKSTVTEQPLERLIKAVKSMSPKALSASVSDIGSV 1121

Query: 179  FDL-DILSSSAPGN------GQNLVERTKGFMSAQNY 268
              + D ++SSAPGN      G++LV  T   + A+N+
Sbjct: 1122 VSMIDRIASSAPGNGSRAAVGEDLVAMTNCRLQARNF 1158


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