BLASTX nr result

ID: Dioscorea21_contig00017132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017132
         (1267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW72550.1| putative GATA transcription factor family protein...   141   3e-31
ref|NP_001150502.1| GATA zinc finger family protein [Zea mays] g...   141   3e-31
ref|XP_003569981.1| PREDICTED: GATA transcription factor 5-like ...   141   4e-31
tpg|DAA36655.1| TPA: putative GATA transcription factor family p...   139   2e-30
tpg|DAA36654.1| TPA: putative GATA transcription factor family p...   139   2e-30

>gb|AFW72550.1| putative GATA transcription factor family protein [Zea mays]
          Length = 394

 Score =  141 bits (356), Expect = 3e-31
 Identities = 70/94 (74%), Positives = 75/94 (79%), Gaps = 1/94 (1%)
 Frame = +3

Query: 840  RCSHCGSQKTPQWRAGPMGAKTLCNACGVRFKSGRLLPEYRPACSPTFVSHVHSNSHRKV 1019
            RCSHCG QKTPQWRAGP GAKTLCNACGVR+KSGRLLPEYRPACSPTFVS +HSNSHRKV
Sbjct: 304  RCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRLLPEYRPACSPTFVSSIHSNSHRKV 363

Query: 1020 LEMRRKKAEELQHGVLLPSPV-SSF*TGPVQSRF 1118
            LEMRRKK  +L     LP PV ++   GP    F
Sbjct: 364  LEMRRKKDGDLGQ---LPLPVPAALLLGPAVESF 394



 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 60/161 (37%), Positives = 85/161 (52%), Gaps = 19/161 (11%)
 Frame = +3

Query: 45  SFALHPCSTLHSSPLQQQQEQSRMEMVALKGSSRP-----EMGHQHGGFLADEVAWAVER 209
           SF +H     H SPL ++ +  +M  +AL+ S RP     E+G         ++  A   
Sbjct: 3   SFVVHH----HGSPLDREGKV-KMSALALRSSLRPCEAAEEVGAGQAWCRGADMGIAA-- 55

Query: 210 GNLLSDEFSVDDLLDLGADEVFDDMLE-----KELGYAVKAEPEVEDE---TENSNSSSG 365
               +DEFSV+DLLDL      +D+ E      ELG  V A   V++E   + +S+ SS 
Sbjct: 56  ---FADEFSVEDLLDL------EDLCEVDKDCAELGDTVPAAESVQEEDKVSSDSHGSSV 106

Query: 366 LSFEA---PIPS---EIALPGADDAAELEWVSRIMDDTYSE 470
           LS+E    P+P    ++ LP A DA ELEWVSRIMDD+ +E
Sbjct: 107 LSYELMTLPVPHPMIDLPLP-AHDAEELEWVSRIMDDSLAE 146


>ref|NP_001150502.1| GATA zinc finger family protein [Zea mays]
            gi|195639668|gb|ACG39302.1| GATA zinc finger family
            protein [Zea mays]
          Length = 394

 Score =  141 bits (356), Expect = 3e-31
 Identities = 70/94 (74%), Positives = 75/94 (79%), Gaps = 1/94 (1%)
 Frame = +3

Query: 840  RCSHCGSQKTPQWRAGPMGAKTLCNACGVRFKSGRLLPEYRPACSPTFVSHVHSNSHRKV 1019
            RCSHCG QKTPQWRAGP GAKTLCNACGVR+KSGRLLPEYRPACSPTFVS +HSNSHRKV
Sbjct: 304  RCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRLLPEYRPACSPTFVSSIHSNSHRKV 363

Query: 1020 LEMRRKKAEELQHGVLLPSPV-SSF*TGPVQSRF 1118
            LEMRRKK  +L     LP PV ++   GP    F
Sbjct: 364  LEMRRKKDGDLGQ---LPLPVPAALLLGPAVESF 394



 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 62/162 (38%), Positives = 85/162 (52%), Gaps = 20/162 (12%)
 Frame = +3

Query: 45  SFALHPCSTLHSSPLQQQQEQSRMEMVALKGSSRP-EMGHQHGGFLADEVAWAVERGNLL 221
           SF +H     H SPL ++ +  +M  +AL+ S RP E   + G       AW   RG  +
Sbjct: 3   SFVVHH----HGSPLDREGKV-KMSALALRSSLRPCEAAEEVGA----GQAWC--RGADM 51

Query: 222 S-----DEFSVDDLLDLGADEVFDDMLE-----KELGYAVKAEPEVEDE---TENSNSSS 362
                 DEFSV+DLLDL      +D+ E      ELG  V A   V++    + +S+ SS
Sbjct: 52  GVAAFVDEFSVEDLLDL------EDLCEVDKDCAELGDTVPAAESVQEGDKVSSDSHGSS 105

Query: 363 GLSFEA---PIPS---EIALPGADDAAELEWVSRIMDDTYSE 470
            LS+E    P+P    ++ LP A DA ELEWVSRIMDD+ +E
Sbjct: 106 VLSYELMTLPVPHPMIDLPLP-AHDAEELEWVSRIMDDSLAE 146


>ref|XP_003569981.1| PREDICTED: GATA transcription factor 5-like [Brachypodium distachyon]
          Length = 364

 Score =  141 bits (355), Expect = 4e-31
 Identities = 65/84 (77%), Positives = 70/84 (83%)
 Frame = +3

Query: 840  RCSHCGSQKTPQWRAGPMGAKTLCNACGVRFKSGRLLPEYRPACSPTFVSHVHSNSHRKV 1019
            RCSHCG QKTPQWRAGP GAKTLCNACGVR+KSGRLLPEYRPACSPTFV  +HSNSHRKV
Sbjct: 281  RCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRLLPEYRPACSPTFVGTIHSNSHRKV 340

Query: 1020 LEMRRKKAEELQHGVLLPSPVSSF 1091
            LEMRRKK   +      P+ V+SF
Sbjct: 341  LEMRRKKDPVVGFEAAAPTAVASF 364


>tpg|DAA36655.1| TPA: putative GATA transcription factor family protein [Zea mays]
          Length = 387

 Score =  139 bits (350), Expect = 2e-30
 Identities = 62/71 (87%), Positives = 66/71 (92%)
 Frame = +3

Query: 840  RCSHCGSQKTPQWRAGPMGAKTLCNACGVRFKSGRLLPEYRPACSPTFVSHVHSNSHRKV 1019
            RCSHCG QKTPQWRAGP GAKTLCNACGVR+KSGRLLPEYRPACSPTFVS +HSNSHRKV
Sbjct: 306  RCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRLLPEYRPACSPTFVSSIHSNSHRKV 365

Query: 1020 LEMRRKKAEEL 1052
            LEMRRKK  ++
Sbjct: 366  LEMRRKKEGDM 376


>tpg|DAA36654.1| TPA: putative GATA transcription factor family protein [Zea mays]
          Length = 462

 Score =  139 bits (350), Expect = 2e-30
 Identities = 62/71 (87%), Positives = 66/71 (92%)
 Frame = +3

Query: 840  RCSHCGSQKTPQWRAGPMGAKTLCNACGVRFKSGRLLPEYRPACSPTFVSHVHSNSHRKV 1019
            RCSHCG QKTPQWRAGP GAKTLCNACGVR+KSGRLLPEYRPACSPTFVS +HSNSHRKV
Sbjct: 381  RCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRLLPEYRPACSPTFVSSIHSNSHRKV 440

Query: 1020 LEMRRKKAEEL 1052
            LEMRRKK  ++
Sbjct: 441  LEMRRKKEGDM 451


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