BLASTX nr result
ID: Dioscorea21_contig00017118
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00017118
(1899 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containi... 614 e-173
emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera] 614 e-173
ref|XP_002329310.1| predicted protein [Populus trichocarpa] gi|2... 613 e-173
ref|XP_002532893.1| pentatricopeptide repeat-containing protein,... 610 e-172
ref|XP_002454820.1| hypothetical protein SORBIDRAFT_04g038070 [S... 573 e-161
>ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein At5g38730-like
[Vitis vinifera]
Length = 590
Score = 614 bits (1584), Expect = e-173
Identities = 294/486 (60%), Positives = 379/486 (77%)
Frame = -1
Query: 1683 DEMPLREFLSSPTVLSSLLCSHTDRTSNTLILSWLVLRYSRLSMIHDALQVFDQMRVNGL 1504
+ + +R++LSSP+VL++++ H D SN+ ILSWLV+ Y+ M DA+QVF+ MRV+G
Sbjct: 99 ERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGF 158
Query: 1503 VPKPHACSALLNALAKARLTASAWKVFDEMIRIGVVPNLCIFNVMLHVCYKAGDAGKAEE 1324
P HAC+ LLN+LAKARLT WKV+ +M+R+GVVPN+ IFNV++H C K+GD KAE+
Sbjct: 159 KPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQ 218
Query: 1323 LVCEMRRRCLSPDLFSYNSLIALYCKKSMHYEALSVQERMETEGIRPDIVTYNCLVHGYC 1144
L+ EM R + PDLF+YN+LI+LYCKK MHYEAL +Q+RME G+ PDIVTYN L++G+C
Sbjct: 219 LLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFC 278
Query: 1143 REGRMREARRLFKDMKGVAPNQVTYTTLIDGYCRVNDLDEALKLREEMESKGLFPGVATY 964
REGRMREA RLF+++ G PN VTYTTLIDGYCRVNDL+EAL+LRE ME +GL PGV TY
Sbjct: 279 REGRMREALRLFREINGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTY 338
Query: 963 NSIIRKLCKDGKMKAANDLLNEMDERKVEPDNITCNTLINAYCKKGNMGFAWKLRNKMLE 784
NSI+RKLC++GK+K AN LLNEM ERKVEPDN+TCNTLINAYCK G+MG A K++ KMLE
Sbjct: 339 NSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLE 398
Query: 783 SRLSLDQFTYKALIHGFCKVQEMDEAKEVLFEMLNAGYSANYSTFSWLVDGYCKQKNETA 604
+ L DQFT+KALIHGFCK+ E+D AKE LFEML+AG+S +YST+SWLVD Y Q N+ A
Sbjct: 399 AGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEA 458
Query: 603 ALGIPDDLIRKGICVDKSVYRALIRRFCKLGLVDWAQKALMSMQEKRISGDSIMYLSLAF 424
+ +PD+L RKG+ VD SVYRALIRR CK+ ++ A++ MQ K + GDS++Y SLA+
Sbjct: 459 VIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAY 518
Query: 423 AYLNAGKPMSASEMLDDMVKNQLRITAKIYNSLNASYADSNDVLKLLWSRAIEKCLISRN 244
AY AGK ++AS+MLD+M K +L IT KIY +ASYA +L L W IE+ LIS+N
Sbjct: 519 AYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGSILGLFWDHVIERRLISKN 578
Query: 243 VYKLMQ 226
+ K +Q
Sbjct: 579 ILKYIQ 584
>emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 614 bits (1584), Expect = e-173
Identities = 294/486 (60%), Positives = 379/486 (77%)
Frame = -1
Query: 1683 DEMPLREFLSSPTVLSSLLCSHTDRTSNTLILSWLVLRYSRLSMIHDALQVFDQMRVNGL 1504
+ + +R++LSSP+VL++++ H D SN+ ILSWLV+ Y+ M DA+QVF+ MRV+G
Sbjct: 99 ERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGF 158
Query: 1503 VPKPHACSALLNALAKARLTASAWKVFDEMIRIGVVPNLCIFNVMLHVCYKAGDAGKAEE 1324
P HAC+ LLN+LAKARLT WKV+ +M+R+GVVPN+ IFNV++H C K+GD KAE+
Sbjct: 159 KPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQ 218
Query: 1323 LVCEMRRRCLSPDLFSYNSLIALYCKKSMHYEALSVQERMETEGIRPDIVTYNCLVHGYC 1144
L+ EM R + PDLF+YN+LI+LYCKK MHYEAL +Q+RME G+ PDIVTYN L++G+C
Sbjct: 219 LLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFC 278
Query: 1143 REGRMREARRLFKDMKGVAPNQVTYTTLIDGYCRVNDLDEALKLREEMESKGLFPGVATY 964
REGRMREA RLF+++ G PN VTYTTLIDGYCRVNDL+EAL+LRE ME +GL PGV TY
Sbjct: 279 REGRMREALRLFREINGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTY 338
Query: 963 NSIIRKLCKDGKMKAANDLLNEMDERKVEPDNITCNTLINAYCKKGNMGFAWKLRNKMLE 784
NSI+RKLC++GK+K AN LLNEM ERKVEPDN+TCNTLINAYCK G+MG A K++ KMLE
Sbjct: 339 NSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLE 398
Query: 783 SRLSLDQFTYKALIHGFCKVQEMDEAKEVLFEMLNAGYSANYSTFSWLVDGYCKQKNETA 604
+ L DQFT+KALIHGFCK+ E+D AKE LFEML+AG+S +YST+SWLVD Y Q N+ A
Sbjct: 399 AGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEA 458
Query: 603 ALGIPDDLIRKGICVDKSVYRALIRRFCKLGLVDWAQKALMSMQEKRISGDSIMYLSLAF 424
+ +PD+L RKG+ VD SVYRALIRR CK+ ++ A++ MQ K + GDS++Y SLA+
Sbjct: 459 VIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAY 518
Query: 423 AYLNAGKPMSASEMLDDMVKNQLRITAKIYNSLNASYADSNDVLKLLWSRAIEKCLISRN 244
AY AGK ++AS+MLD+M K +L IT KIY +ASYA +L L W IE+ LIS+N
Sbjct: 519 AYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGSILGLFWDHVIERRLISKN 578
Query: 243 VYKLMQ 226
+ K +Q
Sbjct: 579 ILKYIQ 584
>ref|XP_002329310.1| predicted protein [Populus trichocarpa] gi|222870764|gb|EEF07895.1|
predicted protein [Populus trichocarpa]
Length = 593
Score = 613 bits (1581), Expect = e-173
Identities = 287/486 (59%), Positives = 381/486 (78%)
Frame = -1
Query: 1683 DEMPLREFLSSPTVLSSLLCSHTDRTSNTLILSWLVLRYSRLSMIHDALQVFDQMRVNGL 1504
+ + ++FLS+ +VLSSL+ H D N+ +LSWLV+ Y M H+A+QVF+ MRVNG
Sbjct: 108 ENIAFKDFLSTQSVLSSLVKIHDDPDVNSHVLSWLVIVYGNSKMTHEAIQVFEHMRVNGF 167
Query: 1503 VPKPHACSALLNALAKARLTASAWKVFDEMIRIGVVPNLCIFNVMLHVCYKAGDAGKAEE 1324
P HAC+ LLN+LAK RLT + WK++ +M+++GVV N+ ++NV+LH C K+GD KAE+
Sbjct: 168 RPHLHACTVLLNSLAKDRLTDTVWKIYKKMVKLGVVANIHVYNVLLHACCKSGDVEKAEK 227
Query: 1323 LVCEMRRRCLSPDLFSYNSLIALYCKKSMHYEALSVQERMETEGIRPDIVTYNCLVHGYC 1144
++ EM +C+ PDLF+YN+LI+LYCKK MHYEALSVQ+RME GI PDI TYN L++G+C
Sbjct: 228 VLSEMELKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEMAGISPDIFTYNSLIYGFC 287
Query: 1143 REGRMREARRLFKDMKGVAPNQVTYTTLIDGYCRVNDLDEALKLREEMESKGLFPGVATY 964
REGRMREA +LF+D+K V PN VTYT+LIDGYCRVNDLDEAL+L+E M KGL+P V TY
Sbjct: 288 REGRMREAVQLFRDIKDVTPNHVTYTSLIDGYCRVNDLDEALRLKEVMSEKGLYPTVITY 347
Query: 963 NSIIRKLCKDGKMKAANDLLNEMDERKVEPDNITCNTLINAYCKKGNMGFAWKLRNKMLE 784
NSI+RKLC+ G+++ AN LLNEM ERK+EPDN+TCNTLINAYCK G+M A K+++KM+
Sbjct: 348 NSILRKLCEGGRLRDANILLNEMSERKIEPDNVTCNTLINAYCKIGDMRSALKVKDKMVG 407
Query: 783 SRLSLDQFTYKALIHGFCKVQEMDEAKEVLFEMLNAGYSANYSTFSWLVDGYCKQKNETA 604
+ L LDQFTYKALIHGFCK +E+D+AKE+LF M++AG+S +Y T+SWLVD YCKQ+NE A
Sbjct: 408 AGLKLDQFTYKALIHGFCKAKEIDKAKELLFGMMDAGFSPSYCTYSWLVDSYCKQQNEEA 467
Query: 603 ALGIPDDLIRKGICVDKSVYRALIRRFCKLGLVDWAQKALMSMQEKRISGDSIMYLSLAF 424
+ +PD+L+R+G+CVD SVYRALIRRFCK+ +D AQ+ L M++K I GDS++Y SLA+
Sbjct: 468 VIKLPDELVRRGLCVDVSVYRALIRRFCKIEKIDCAQRVLGLMKDKGIFGDSVVYTSLAY 527
Query: 423 AYLNAGKPMSASEMLDDMVKNQLRITAKIYNSLNASYADSNDVLKLLWSRAIEKCLISRN 244
Y GK S++LD+M K +L IT KIY S NASYA N +L L W+ +E+ L+S+N
Sbjct: 528 GYWKVGKVNVTSDILDEMYKKRLMITLKIYRSFNASYASDNSILSLFWNHVLERRLMSKN 587
Query: 243 VYKLMQ 226
+ K MQ
Sbjct: 588 ILKDMQ 593
>ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223527353|gb|EEF29498.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 625
Score = 610 bits (1574), Expect = e-172
Identities = 298/545 (54%), Positives = 391/545 (71%), Gaps = 1/545 (0%)
Frame = -1
Query: 1899 LSNPKISIHFTTSIANQXXXXXXXXXXXXXXXXSFFRCLQS-IPHYHXXXXXXXXXXXXX 1723
L PKI T S +Q + F+ ++S IP+Y
Sbjct: 29 LLRPKICSILTASTLHQVLYQLSLHSQGPCLSWALFKWIESSIPNYKHSLQSSWTMIHIL 88
Query: 1722 XXXXXXXXXXXXLDEMPLREFLSSPTVLSSLLCSHTDRTSNTLILSWLVLRYSRLSMIHD 1543
L+++ R+FLS+ +VLS+L+ H D N+ + SWLV+ Y+ M +
Sbjct: 89 TKFKHLKTAQSLLEKIAYRDFLSTQSVLSALVRLHDDPDINSHVFSWLVIVYANTKMKQE 148
Query: 1542 ALQVFDQMRVNGLVPKPHACSALLNALAKARLTASAWKVFDEMIRIGVVPNLCIFNVMLH 1363
A+QVF+ M VNG P HAC+ LLN+LAK RLT WKV+ +M RIGV N+ ++NV++H
Sbjct: 149 AIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNVLIH 208
Query: 1362 VCYKAGDAGKAEELVCEMRRRCLSPDLFSYNSLIALYCKKSMHYEALSVQERMETEGIRP 1183
C K+GD KA+ L+ EM +C+ PDLF+YN+LI+LYCKK MHYEALSVQ+RME EGI+P
Sbjct: 209 ACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKP 268
Query: 1182 DIVTYNCLVHGYCREGRMREARRLFKDMKGVAPNQVTYTTLIDGYCRVNDLDEALKLREE 1003
DIVTYN L+HG+C+EGRMREA RLFK+++ PN VTYTTLIDGYCR+NDLD+AL+LREE
Sbjct: 269 DIVTYNSLIHGFCKEGRMREAMRLFKEIRDATPNHVTYTTLIDGYCRLNDLDQALRLREE 328
Query: 1002 MESKGLFPGVATYNSIIRKLCKDGKMKAANDLLNEMDERKVEPDNITCNTLINAYCKKGN 823
ME++GL+P V TYNSI+RKLC+ G+++ AN LLNEM E+K+EPDN+TCNTLINAYCK G+
Sbjct: 329 MEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGD 388
Query: 822 MGFAWKLRNKMLESRLSLDQFTYKALIHGFCKVQEMDEAKEVLFEMLNAGYSANYSTFSW 643
M A K++N+M+E+ L LDQFTYKALIHGFCK++EMD AKE+L ML+AG+S +Y T+SW
Sbjct: 389 MKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSW 448
Query: 642 LVDGYCKQKNETAALGIPDDLIRKGICVDKSVYRALIRRFCKLGLVDWAQKALMSMQEKR 463
LVDGYC Q+NE A L +PD+ +RKG+CVDKS+YRALIRRFCK VD+A+K MQEK
Sbjct: 449 LVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKREQVDYAKKIFSLMQEKG 508
Query: 462 ISGDSIMYLSLAFAYLNAGKPMSASEMLDDMVKNQLRITAKIYNSLNASYADSNDVLKLL 283
GDS++Y SLA+AY GK +AS++LD+M K +L IT KIY +LNASYA N +L L
Sbjct: 509 TLGDSVIYTSLAYAYWKLGKANAASDLLDEMYKRRLMITLKIYRALNASYAGDNSILSLF 568
Query: 282 WSRAI 268
W+ +
Sbjct: 569 WNHVV 573
>ref|XP_002454820.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
gi|241934651|gb|EES07796.1| hypothetical protein
SORBIDRAFT_04g038070 [Sorghum bicolor]
Length = 600
Score = 573 bits (1476), Expect = e-161
Identities = 284/486 (58%), Positives = 365/486 (75%), Gaps = 2/486 (0%)
Frame = -1
Query: 1680 EMPLREFLSSPTVLSSLLCSHTDRTSNTLILSWLVLRYSRLSMIHDALQVFDQMRVNGLV 1501
++ LR LSSP +L SLL + R + SWLVL ++ + HDAL+VFDQMR GL
Sbjct: 92 DLSLRHPLSSPLLLPSLLAAADPR-----VPSWLVLVLAQSARPHDALRVFDQMRARGLA 146
Query: 1500 PKPHACSALLNALAKARLTASAWKVFDEMIRIGVVPNLCIFNVMLHVCYKAGDAGKAEEL 1321
P HAC+ALL ALA+AR+TA+A +VFDEM R G+ + ++N MLHVC KAGDA +AE L
Sbjct: 147 PDAHACTALLTALARARMTATARRVFDEMARAGLAVSTHVYNAMLHVCLKAGDAARAEAL 206
Query: 1320 VCEMRRRCLSPDLFSYNSLIALYCKKSMHYEALSVQERMETEGIRPDIVTYNCLVHGYCR 1141
V M + D FSYN++IALYCKK M YEA+ V++RM+ EGIR D VT+N L+HG C+
Sbjct: 207 VTRMDAAGVPLDRFSYNTVIALYCKKGMRYEAMCVRDRMDKEGIRADTVTWNSLIHGLCK 266
Query: 1140 EGRMREARRLFKDMKGV--APNQVTYTTLIDGYCRVNDLDEALKLREEMESKGLFPGVAT 967
GR++EA +LF +M P+ VTYTTLIDGYCR +++EA+KLR EME+ G+ PGVAT
Sbjct: 267 YGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAGNIEEAVKLRGEMEATGMLPGVAT 326
Query: 966 YNSIIRKLCKDGKMKAANDLLNEMDERKVEPDNITCNTLINAYCKKGNMGFAWKLRNKML 787
YN+I+RKLC+DGKMK N LLNEMDERKV+ D++TCNTLINAYCK+G+M A K++ KM+
Sbjct: 327 YNAILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNTLINAYCKRGHMTSACKVKKKMM 386
Query: 786 ESRLSLDQFTYKALIHGFCKVQEMDEAKEVLFEMLNAGYSANYSTFSWLVDGYCKQKNET 607
ES L L+QFTYKALIHGFCK +E+DEAKE F+M++AG+S NYS FSWLVDG+CK+ N
Sbjct: 387 ESGLQLNQFTYKALIHGFCKAKELDEAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNAD 446
Query: 606 AALGIPDDLIRKGICVDKSVYRALIRRFCKLGLVDWAQKALMSMQEKRISGDSIMYLSLA 427
A L IPD+L+++G+ DK+VYR+LIRR C+ GLVD AQK MQ K + GDS++Y +LA
Sbjct: 447 AVLLIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQKVFDQMQSKGLVGDSLVYATLA 506
Query: 426 FAYLNAGKPMSASEMLDDMVKNQLRITAKIYNSLNASYADSNDVLKLLWSRAIEKCLISR 247
+ YL GKP++AS LD M KNQL IT +IYN L SYAD + L +LW RAIE+ LI +
Sbjct: 507 YTYLTEGKPVAASNTLDGMAKNQLYITPQIYNCLCTSYADEKETLNILWVRAIERGLIKK 566
Query: 246 NVYKLM 229
+VYKLM
Sbjct: 567 SVYKLM 572