BLASTX nr result
ID: Dioscorea21_contig00017061
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00017061 (441 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002266084.1| PREDICTED: uncharacterized LOC100260232 [Vit... 98 2e-31 ref|XP_002524989.1| Hippocampus abundant transcript 1 protein, p... 86 3e-28 emb|CAN74055.1| hypothetical protein VITISV_026070 [Vitis vinifera] 98 5e-28 ref|XP_002524988.1| Hippocampus abundant transcript 1 protein, p... 89 6e-28 gb|AFK40263.1| unknown [Medicago truncatula] 83 3e-26 >ref|XP_002266084.1| PREDICTED: uncharacterized LOC100260232 [Vitis vinifera] gi|296087966|emb|CBI35249.3| unnamed protein product [Vitis vinifera] Length = 435 Score = 98.2 bits (243), Expect(2) = 2e-31 Identities = 50/84 (59%), Positives = 59/84 (70%) Frame = +3 Query: 6 LPETLSGSPRPQHFGPSSTMFFKILQERWYSMKDTLTLIRSSGILRGITYITFFYKLGMT 185 L ET+ +PR T FK+LQER SMK TL+ SS L+GI+ I+FFY+LGM+ Sbjct: 187 LVETVRRAPRQDQHSTGCTKIFKVLQERCLSMKHAATLVLSSPTLKGISIISFFYELGMS 246 Query: 186 GISSVLLYYLKAVFGFNKNQFSEI 257 GIS VLLYYLKA FGFNKNQ SEI Sbjct: 247 GISGVLLYYLKAAFGFNKNQLSEI 270 Score = 62.4 bits (150), Expect(2) = 2e-31 Identities = 31/41 (75%), Positives = 34/41 (82%) Frame = +2 Query: 317 KNQFSEIQLVVDIGSTFSQALLFPLINPLVGEKLILCLALL 439 KNQ SEI ++V IGS FSQ L+ PLINPLVGEKLILC ALL Sbjct: 264 KNQLSEILMMVGIGSIFSQMLILPLINPLVGEKLILCTALL 304 >ref|XP_002524989.1| Hippocampus abundant transcript 1 protein, putative [Ricinus communis] gi|223535733|gb|EEF37396.1| Hippocampus abundant transcript 1 protein, putative [Ricinus communis] Length = 443 Score = 86.3 bits (212), Expect(2) = 3e-28 Identities = 41/84 (48%), Positives = 59/84 (70%) Frame = +3 Query: 6 LPETLSGSPRPQHFGPSSTMFFKILQERWYSMKDTLTLIRSSGILRGITYITFFYKLGMT 185 L ET+ + R T K+ R+ SM+D ++ SS LRGI++++FFY+LGM+ Sbjct: 197 LVETVERAQRKDQNSTFLTKIIKVFHTRYKSMRDAAIIVFSSPTLRGISFVSFFYELGMS 256 Query: 186 GISSVLLYYLKAVFGFNKNQFSEI 257 GI++VLL+YLK+VFGFNKNQ+SEI Sbjct: 257 GINAVLLFYLKSVFGFNKNQYSEI 280 Score = 63.9 bits (154), Expect(2) = 3e-28 Identities = 31/41 (75%), Positives = 35/41 (85%) Frame = +2 Query: 317 KNQFSEIQLVVDIGSTFSQALLFPLINPLVGEKLILCLALL 439 KNQ+SEI L+V IG FSQ LL PL+NPLVGEK+ILCLALL Sbjct: 274 KNQYSEILLMVGIGEIFSQILLLPLVNPLVGEKVILCLALL 314 >emb|CAN74055.1| hypothetical protein VITISV_026070 [Vitis vinifera] Length = 467 Score = 98.2 bits (243), Expect(2) = 5e-28 Identities = 50/84 (59%), Positives = 59/84 (70%) Frame = +3 Query: 6 LPETLSGSPRPQHFGPSSTMFFKILQERWYSMKDTLTLIRSSGILRGITYITFFYKLGMT 185 L ET+ +PR T FK+LQER SMK TL+ SS L+GI+ I+FFY+LGM+ Sbjct: 189 LVETVRRAPRQDQHSTGCTKIFKVLQERCLSMKHAATLVLSSPTLKGISIISFFYELGMS 248 Query: 186 GISSVLLYYLKAVFGFNKNQFSEI 257 GIS VLLYYLKA FGFNKNQ SEI Sbjct: 249 GISGVLLYYLKAAFGFNKNQLSEI 272 Score = 51.2 bits (121), Expect(2) = 5e-28 Identities = 31/60 (51%), Positives = 34/60 (56%), Gaps = 19/60 (31%) Frame = +2 Query: 317 KNQFSEIQLVVDIGSTFSQA-------------------LLFPLINPLVGEKLILCLALL 439 KNQ SEI ++V IGS FSQ L+ PLINPLVGEKLILC ALL Sbjct: 266 KNQLSEILMMVGIGSIFSQGKIMRYIXIKPSLVIIEGMMLILPLINPLVGEKLILCTALL 325 >ref|XP_002524988.1| Hippocampus abundant transcript 1 protein, putative [Ricinus communis] gi|223535732|gb|EEF37395.1| Hippocampus abundant transcript 1 protein, putative [Ricinus communis] Length = 442 Score = 89.4 bits (220), Expect(2) = 6e-28 Identities = 44/84 (52%), Positives = 59/84 (70%) Frame = +3 Query: 6 LPETLSGSPRPQHFGPSSTMFFKILQERWYSMKDTLTLIRSSGILRGITYITFFYKLGMT 185 L ET+ + R T K+L R+ SMKD T++ SS LRGI++++FFY+LGM+ Sbjct: 197 LVETIQPAQRRDQDSTFLTKTIKVLHTRYKSMKDAATIVFSSHTLRGISFVSFFYELGMS 256 Query: 186 GISSVLLYYLKAVFGFNKNQFSEI 257 GIS+VL YYLKA FGF+KNQ+SEI Sbjct: 257 GISTVLFYYLKAAFGFSKNQYSEI 280 Score = 59.7 bits (143), Expect(2) = 6e-28 Identities = 28/41 (68%), Positives = 34/41 (82%) Frame = +2 Query: 317 KNQFSEIQLVVDIGSTFSQALLFPLINPLVGEKLILCLALL 439 KNQ+SEI +V+IG FSQ L+ PLINPLVGEK+ILC+ LL Sbjct: 274 KNQYSEILSMVEIGEIFSQILVLPLINPLVGEKVILCIGLL 314 >gb|AFK40263.1| unknown [Medicago truncatula] Length = 442 Score = 82.8 bits (203), Expect(2) = 3e-26 Identities = 43/84 (51%), Positives = 54/84 (64%) Frame = +3 Query: 6 LPETLSGSPRPQHFGPSSTMFFKILQERWYSMKDTLTLIRSSGILRGITYITFFYKLGMT 185 L ET+ P T +L R+ SM++ ++ S LRG+ ++FFYKLGMT Sbjct: 194 LVETVKLDPGKNQELGFCTRVIYVLSRRYKSMRNAAEIVIFSPTLRGVALVSFFYKLGMT 253 Query: 186 GISSVLLYYLKAVFGFNKNQFSEI 257 GI SVLLYYLKAVFGFNKNQFSE+ Sbjct: 254 GIHSVLLYYLKAVFGFNKNQFSEL 277 Score = 60.5 bits (145), Expect(2) = 3e-26 Identities = 28/41 (68%), Positives = 35/41 (85%) Frame = +2 Query: 317 KNQFSEIQLVVDIGSTFSQALLFPLINPLVGEKLILCLALL 439 KNQFSE+ ++V IGS FSQ +L P++NPLVGEK+ILC ALL Sbjct: 271 KNQFSELLMMVGIGSIFSQIVLLPILNPLVGEKVILCSALL 311