BLASTX nr result

ID: Dioscorea21_contig00017061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017061
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266084.1| PREDICTED: uncharacterized LOC100260232 [Vit...    98   2e-31
ref|XP_002524989.1| Hippocampus abundant transcript 1 protein, p...    86   3e-28
emb|CAN74055.1| hypothetical protein VITISV_026070 [Vitis vinifera]    98   5e-28
ref|XP_002524988.1| Hippocampus abundant transcript 1 protein, p...    89   6e-28
gb|AFK40263.1| unknown [Medicago truncatula]                           83   3e-26

>ref|XP_002266084.1| PREDICTED: uncharacterized LOC100260232 [Vitis vinifera]
           gi|296087966|emb|CBI35249.3| unnamed protein product
           [Vitis vinifera]
          Length = 435

 Score = 98.2 bits (243), Expect(2) = 2e-31
 Identities = 50/84 (59%), Positives = 59/84 (70%)
 Frame = +3

Query: 6   LPETLSGSPRPQHFGPSSTMFFKILQERWYSMKDTLTLIRSSGILRGITYITFFYKLGMT 185
           L ET+  +PR        T  FK+LQER  SMK   TL+ SS  L+GI+ I+FFY+LGM+
Sbjct: 187 LVETVRRAPRQDQHSTGCTKIFKVLQERCLSMKHAATLVLSSPTLKGISIISFFYELGMS 246

Query: 186 GISSVLLYYLKAVFGFNKNQFSEI 257
           GIS VLLYYLKA FGFNKNQ SEI
Sbjct: 247 GISGVLLYYLKAAFGFNKNQLSEI 270



 Score = 62.4 bits (150), Expect(2) = 2e-31
 Identities = 31/41 (75%), Positives = 34/41 (82%)
 Frame = +2

Query: 317 KNQFSEIQLVVDIGSTFSQALLFPLINPLVGEKLILCLALL 439
           KNQ SEI ++V IGS FSQ L+ PLINPLVGEKLILC ALL
Sbjct: 264 KNQLSEILMMVGIGSIFSQMLILPLINPLVGEKLILCTALL 304


>ref|XP_002524989.1| Hippocampus abundant transcript 1 protein, putative [Ricinus
           communis] gi|223535733|gb|EEF37396.1| Hippocampus
           abundant transcript 1 protein, putative [Ricinus
           communis]
          Length = 443

 Score = 86.3 bits (212), Expect(2) = 3e-28
 Identities = 41/84 (48%), Positives = 59/84 (70%)
 Frame = +3

Query: 6   LPETLSGSPRPQHFGPSSTMFFKILQERWYSMKDTLTLIRSSGILRGITYITFFYKLGMT 185
           L ET+  + R        T   K+   R+ SM+D   ++ SS  LRGI++++FFY+LGM+
Sbjct: 197 LVETVERAQRKDQNSTFLTKIIKVFHTRYKSMRDAAIIVFSSPTLRGISFVSFFYELGMS 256

Query: 186 GISSVLLYYLKAVFGFNKNQFSEI 257
           GI++VLL+YLK+VFGFNKNQ+SEI
Sbjct: 257 GINAVLLFYLKSVFGFNKNQYSEI 280



 Score = 63.9 bits (154), Expect(2) = 3e-28
 Identities = 31/41 (75%), Positives = 35/41 (85%)
 Frame = +2

Query: 317 KNQFSEIQLVVDIGSTFSQALLFPLINPLVGEKLILCLALL 439
           KNQ+SEI L+V IG  FSQ LL PL+NPLVGEK+ILCLALL
Sbjct: 274 KNQYSEILLMVGIGEIFSQILLLPLVNPLVGEKVILCLALL 314


>emb|CAN74055.1| hypothetical protein VITISV_026070 [Vitis vinifera]
          Length = 467

 Score = 98.2 bits (243), Expect(2) = 5e-28
 Identities = 50/84 (59%), Positives = 59/84 (70%)
 Frame = +3

Query: 6   LPETLSGSPRPQHFGPSSTMFFKILQERWYSMKDTLTLIRSSGILRGITYITFFYKLGMT 185
           L ET+  +PR        T  FK+LQER  SMK   TL+ SS  L+GI+ I+FFY+LGM+
Sbjct: 189 LVETVRRAPRQDQHSTGCTKIFKVLQERCLSMKHAATLVLSSPTLKGISIISFFYELGMS 248

Query: 186 GISSVLLYYLKAVFGFNKNQFSEI 257
           GIS VLLYYLKA FGFNKNQ SEI
Sbjct: 249 GISGVLLYYLKAAFGFNKNQLSEI 272



 Score = 51.2 bits (121), Expect(2) = 5e-28
 Identities = 31/60 (51%), Positives = 34/60 (56%), Gaps = 19/60 (31%)
 Frame = +2

Query: 317 KNQFSEIQLVVDIGSTFSQA-------------------LLFPLINPLVGEKLILCLALL 439
           KNQ SEI ++V IGS FSQ                    L+ PLINPLVGEKLILC ALL
Sbjct: 266 KNQLSEILMMVGIGSIFSQGKIMRYIXIKPSLVIIEGMMLILPLINPLVGEKLILCTALL 325


>ref|XP_002524988.1| Hippocampus abundant transcript 1 protein, putative [Ricinus
           communis] gi|223535732|gb|EEF37395.1| Hippocampus
           abundant transcript 1 protein, putative [Ricinus
           communis]
          Length = 442

 Score = 89.4 bits (220), Expect(2) = 6e-28
 Identities = 44/84 (52%), Positives = 59/84 (70%)
 Frame = +3

Query: 6   LPETLSGSPRPQHFGPSSTMFFKILQERWYSMKDTLTLIRSSGILRGITYITFFYKLGMT 185
           L ET+  + R        T   K+L  R+ SMKD  T++ SS  LRGI++++FFY+LGM+
Sbjct: 197 LVETIQPAQRRDQDSTFLTKTIKVLHTRYKSMKDAATIVFSSHTLRGISFVSFFYELGMS 256

Query: 186 GISSVLLYYLKAVFGFNKNQFSEI 257
           GIS+VL YYLKA FGF+KNQ+SEI
Sbjct: 257 GISTVLFYYLKAAFGFSKNQYSEI 280



 Score = 59.7 bits (143), Expect(2) = 6e-28
 Identities = 28/41 (68%), Positives = 34/41 (82%)
 Frame = +2

Query: 317 KNQFSEIQLVVDIGSTFSQALLFPLINPLVGEKLILCLALL 439
           KNQ+SEI  +V+IG  FSQ L+ PLINPLVGEK+ILC+ LL
Sbjct: 274 KNQYSEILSMVEIGEIFSQILVLPLINPLVGEKVILCIGLL 314


>gb|AFK40263.1| unknown [Medicago truncatula]
          Length = 442

 Score = 82.8 bits (203), Expect(2) = 3e-26
 Identities = 43/84 (51%), Positives = 54/84 (64%)
 Frame = +3

Query: 6   LPETLSGSPRPQHFGPSSTMFFKILQERWYSMKDTLTLIRSSGILRGITYITFFYKLGMT 185
           L ET+   P         T    +L  R+ SM++   ++  S  LRG+  ++FFYKLGMT
Sbjct: 194 LVETVKLDPGKNQELGFCTRVIYVLSRRYKSMRNAAEIVIFSPTLRGVALVSFFYKLGMT 253

Query: 186 GISSVLLYYLKAVFGFNKNQFSEI 257
           GI SVLLYYLKAVFGFNKNQFSE+
Sbjct: 254 GIHSVLLYYLKAVFGFNKNQFSEL 277



 Score = 60.5 bits (145), Expect(2) = 3e-26
 Identities = 28/41 (68%), Positives = 35/41 (85%)
 Frame = +2

Query: 317 KNQFSEIQLVVDIGSTFSQALLFPLINPLVGEKLILCLALL 439
           KNQFSE+ ++V IGS FSQ +L P++NPLVGEK+ILC ALL
Sbjct: 271 KNQFSELLMMVGIGSIFSQIVLLPILNPLVGEKVILCSALL 311


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