BLASTX nr result

ID: Dioscorea21_contig00017051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017051
         (1815 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258...   419   e-114
ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glyc...   412   e-112
ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitoch...   409   e-111
ref|XP_003603877.1| RNA-binding protein 24-B [Medicago truncatul...   394   e-107
ref|XP_002307819.1| predicted protein [Populus trichocarpa] gi|2...   387   e-105

>ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258188 [Vitis vinifera]
          Length = 346

 Score =  419 bits (1078), Expect = e-114
 Identities = 193/282 (68%), Positives = 225/282 (79%), Gaps = 5/282 (1%)
 Frame = -2

Query: 1421 HRPIPGPGSGS----GLHFLNSPFGDTTFTKVFVGGLAWETQSDTLRRHFEQFGDILEAV 1254
            ++PIPGP SGS    G  FLNSPFGDTT+TKVFVGGLAWETQS+T+RR+FEQFG+ILEAV
Sbjct: 3    YQPIPGPSSGSSSSSGFQFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAV 62

Query: 1253 VITDKNTGRSKGYGFVTFSDPESARRACVDPSPIIDGRRANCNLASLGRPRPPLPYSQVR 1074
            VITDKNTGRSKGYGFVTF DPESARRAC+DP+PIIDGRRANCNLASLGRPRP + Y ++R
Sbjct: 63   VITDKNTGRSKGYGFVTFRDPESARRACLDPAPIIDGRRANCNLASLGRPRPSMSYGRLR 122

Query: 1073 STGPYYGAIPVVRGAYVGSPSYNQPIPYNYQQGFAYPQYGYTSYGPEYVYPQNVYTPYTG 894
               PY G++P  RG+YVG+  Y QP+ Y+YQQGF YP YGY +YGPEYVYPQ VY PY G
Sbjct: 123  PVTPYLGSVPATRGSYVGNFGYQQPVSYSYQQGFMYPSYGYAAYGPEYVYPQGVYNPYPG 182

Query: 893  QQYIQVYGIPGTINPTNYPISQMGHALPPGHGYAAVQGYTMPGHHLVQIAGPNVSGATAA 714
            QQY+Q+YG+PGT+N   YP  Q+G  LP  HGY  VQGY MPGH  +Q  G +V+  + +
Sbjct: 183  QQYLQIYGVPGTVNTAIYPYGQLGQTLPSSHGYTTVQGYAMPGHQFMQFGGSSVNAISTS 242

Query: 713  PVPAIPA-YHAGLAAGPFPAQPQFLGPAHSPQFTQGSGSDQT 591
            P+P I A Y  G+AA P PAQPQF+ PAHSPQF QGSG DQT
Sbjct: 243  PIPTIQAPYPTGIAA-PVPAQPQFIVPAHSPQFIQGSGPDQT 283


>ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glycine max]
          Length = 286

 Score =  412 bits (1058), Expect = e-112
 Identities = 188/281 (66%), Positives = 220/281 (78%), Gaps = 1/281 (0%)
 Frame = -2

Query: 1427 AFHRPIPGPGSGSGLHFLNSPFGDTTFTKVFVGGLAWETQSDTLRRHFEQFGDILEAVVI 1248
            A   P  G  S SG   LNSPFGDTT+TKVFVGGLAWETQS+T+RR+F+QFG+ILEAVVI
Sbjct: 5    AMQGPSSGSSSSSGFQLLNSPFGDTTYTKVFVGGLAWETQSETMRRYFDQFGEILEAVVI 64

Query: 1247 TDKNTGRSKGYGFVTFSDPESARRACVDPSPIIDGRRANCNLASLGRPRPPLPYSQVRST 1068
            TDKNTGRSKGYGFVTF DPE+ARRAC DPSP+IDGRRANCNLASLGRPRPPLPY ++R  
Sbjct: 65   TDKNTGRSKGYGFVTFRDPEAARRACADPSPVIDGRRANCNLASLGRPRPPLPYGRIRPA 124

Query: 1067 GPYYGAIPVVRGAYVGSPSYNQPIPYNYQQGFAYPQYGYTSYGPEYVYPQNVYTPYTGQQ 888
             PY G++   RGAYVG   Y QP+ Y+YQQG  YP YGYTSYGPEY+YPQ++Y PY GQQ
Sbjct: 125  SPYVGSLQPARGAYVGGFGYQQPVSYSYQQGLVYPPYGYTSYGPEYIYPQSLYNPYMGQQ 184

Query: 887  YIQVYGIPGTINPTN-YPISQMGHALPPGHGYAAVQGYTMPGHHLVQIAGPNVSGATAAP 711
            Y+Q+YG+PG +N T  YP  Q+G A+  GHGY+A+QGYT+PGH +V   G NV+  T +P
Sbjct: 185  YLQIYGVPGAVNTTTIYPYGQVGQAITSGHGYSAMQGYTVPGHQIVPYGGSNVNAITTSP 244

Query: 710  VPAIPAYHAGLAAGPFPAQPQFLGPAHSPQFTQGSGSDQTA 588
            +PAI A +    A P P QPQF+ PA SPQF QGSG DQTA
Sbjct: 245  MPAIQASYPSGIAAPVPGQPQFIVPAPSPQFMQGSGPDQTA 285


>ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Glycine
            max]
          Length = 293

 Score =  409 bits (1050), Expect = e-111
 Identities = 188/288 (65%), Positives = 222/288 (77%), Gaps = 8/288 (2%)
 Frame = -2

Query: 1427 AFHRPIPGPGSGSGLHFLNSPFGDTTFTKVFVGGLAWETQSDTLRRHFEQFGDILEAVVI 1248
            A   P  G  S SG   LNSPFGDTT+TKVFVGGLAWETQS+T+RR+F+QFG+ILEAVVI
Sbjct: 5    AIQVPSSGSSSSSGFQLLNSPFGDTTYTKVFVGGLAWETQSETMRRYFDQFGEILEAVVI 64

Query: 1247 TDKNTGRSKGYGFVTFSDPESARRACVDPSPIIDGRRANCNLASLGRPRPPLPYS----- 1083
            TDKNTGRSKGYGFVTF DPE+ARRAC DP+P+IDGRRANCNLASLGRPRPPLPY      
Sbjct: 65   TDKNTGRSKGYGFVTFRDPEAARRACADPTPVIDGRRANCNLASLGRPRPPLPYGIVLCL 124

Query: 1082 --QVRSTGPYYGAIPVVRGAYVGSPSYNQ-PIPYNYQQGFAYPQYGYTSYGPEYVYPQNV 912
              ++R   PY G++   RGAYVG   Y Q P+ Y+YQQG  YP YGYT+YGPEY+YPQ++
Sbjct: 125  IRRIRPASPYVGSLQPARGAYVGGFGYQQQPVSYSYQQGLVYPPYGYTTYGPEYIYPQSL 184

Query: 911  YTPYTGQQYIQVYGIPGTINPTNYPISQMGHALPPGHGYAAVQGYTMPGHHLVQIAGPNV 732
            Y PY GQQY+Q+YG+PG +N T YP  Q+G A+P GHGY+A+QGYT+PGH +V   G NV
Sbjct: 185  YNPYMGQQYLQIYGVPGAVNTTVYPYGQVGQAIPSGHGYSAIQGYTVPGHQIVPYGGSNV 244

Query: 731  SGATAAPVPAIPAYHAGLAAGPFPAQPQFLGPAHSPQFTQGSGSDQTA 588
            +  T +P+PAI A +    A P P QPQF+ PAHSPQF QGSG DQTA
Sbjct: 245  NAITTSPMPAIQASYPSGIAAPVPGQPQFIVPAHSPQFMQGSGPDQTA 292


>ref|XP_003603877.1| RNA-binding protein 24-B [Medicago truncatula]
            gi|355492925|gb|AES74128.1| RNA-binding protein 24-B
            [Medicago truncatula]
          Length = 371

 Score =  394 bits (1012), Expect = e-107
 Identities = 188/282 (66%), Positives = 216/282 (76%), Gaps = 2/282 (0%)
 Frame = -2

Query: 1430 MAFHRPIPGPGSGSGLHFLNSPFGDTTFTKVFVGGLAWETQSDTLRRHFEQFGDILEAVV 1251
            MA+  P  G  S SG   LNSPFGDTT+TKVFVGGLAWETQS+T+RR+FEQFGDILEAVV
Sbjct: 1    MAYQGPSSGSSSSSGFQLLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGDILEAVV 60

Query: 1250 ITDKNTGRSKGYGFVTFSDPESARRACVDPSPIIDGRRANCNLASLGRPR-PPLPYSQVR 1074
            ITDKNTGRSKGYGFVTF DPE+ARRAC DPSP+IDGRRANCNLAS GRPR PP+ Y +VR
Sbjct: 61   ITDKNTGRSKGYGFVTFRDPEAARRACADPSPVIDGRRANCNLASHGRPRGPPISYGRVR 120

Query: 1073 STGPYYGAIPVVRGAYVGSPSYNQPIPYNYQQGFAYPQYGYTSYGPEYVYPQNVYTPYTG 894
               PY G++   RGAYVG   Y QP+ Y YQQG  YP YGYT+YGPEYVYPQ +Y PY G
Sbjct: 121  PASPYVGSLQPARGAYVGGYGYQQPLSYGYQQGMVYPPYGYTTYGPEYVYPQGMYNPYAG 180

Query: 893  -QQYIQVYGIPGTINPTNYPISQMGHALPPGHGYAAVQGYTMPGHHLVQIAGPNVSGATA 717
             QQY+Q+YG+PG +N T YP  Q+G A+P GHGY A+QGYT+PGH +V   G NV+  T 
Sbjct: 181  QQQYLQIYGVPGAMNTTIYPYGQLGQAIPGGHGYTAMQGYTVPGHQIVPYGGSNVNAITT 240

Query: 716  APVPAIPAYHAGLAAGPFPAQPQFLGPAHSPQFTQGSGSDQT 591
            +PVPAI   +  +AA P P QPQF+    SPQF QGSG DQT
Sbjct: 241  SPVPAIQVPYPRIAA-PVPGQPQFI---VSPQFMQGSGPDQT 278


>ref|XP_002307819.1| predicted protein [Populus trichocarpa] gi|222857268|gb|EEE94815.1|
            predicted protein [Populus trichocarpa]
          Length = 286

 Score =  387 bits (994), Expect = e-105
 Identities = 182/283 (64%), Positives = 216/283 (76%), Gaps = 6/283 (2%)
 Frame = -2

Query: 1421 HRPIPGPGSGS----GLHFLNSPFGDTTFTKVFVGGLAWETQSDTLRRHFEQFGDILEAV 1254
            ++ IPGP SGS    G  ++NSPFGDTT+TKVFVGGLAWETQS+T+RR+FEQFGDILEAV
Sbjct: 3    YQAIPGPSSGSSSSSGFQYMNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGDILEAV 62

Query: 1253 VITDKNTGRSKGYGFVTFSDPESARRACVDPSPIIDGRRANCNLASLGRPRPPLPYSQVR 1074
            VITDKNTGRSKGYGFVTF +P++ARRAC DP+PIIDGRRANCNLASLGRPRPPLPY + R
Sbjct: 63   VITDKNTGRSKGYGFVTFREPDAARRACADPTPIIDGRRANCNLASLGRPRPPLPYGRPR 122

Query: 1073 STGPYYGAIPVVRGAYVGSPSYNQPIPYNYQQGFAYPQYGYTSYGPEYVYPQNVYTPY-T 897
               PY  ++   RG YVGS  Y QP+ Y YQQG  Y  YGY +YGPEYVY Q  Y PY T
Sbjct: 123  PAAPYITSVQTPRGTYVGSFGYQQPVSYGYQQGLMYNPYGYAAYGPEYVYQQGAYNPYAT 182

Query: 896  GQQYIQVYGIPGTINPTNYPISQMGHALPPGHGYAAVQGYTMPGHHLVQIAGPNVSGATA 717
            G QY+Q+YG+PGT+N   YP  Q+   +P GHGY ++ GY +PGH +VQ  GP+V+  T 
Sbjct: 183  GHQYLQIYGVPGTVNSGMYPYGQLSQNVPGGHGYTSMPGYAVPGHQIVQFGGPSVNAITT 242

Query: 716  APVPAIPA-YHAGLAAGPFPAQPQFLGPAHSPQFTQGSGSDQT 591
            + +P I A YH G+AA   PAQ QF+ PA SPQ+ QGSGSDQT
Sbjct: 243  SSMPTIQAPYHTGIAAA-VPAQSQFIVPAPSPQYMQGSGSDQT 284


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