BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017037
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316747.1| predicted protein [Populus trichocarpa] gi|2...   128   4e-28
ref|XP_002269512.2| PREDICTED: pentatricopeptide repeat-containi...   122   4e-26
emb|CBI30774.3| unnamed protein product [Vitis vinifera]              122   4e-26
ref|XP_004164255.1| PREDICTED: pentatricopeptide repeat-containi...   120   1e-25
ref|NP_001031667.1| pentatricopeptide repeat-containing protein ...   120   1e-25

>ref|XP_002316747.1| predicted protein [Populus trichocarpa] gi|222859812|gb|EEE97359.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score =  128 bits (322), Expect = 4e-28
 Identities = 64/94 (68%), Positives = 77/94 (81%)
 Frame = +2

Query: 32  SSLSLKQHNNQSKLPCILSGDKSLQIVKKPAKKEHHLWKKRDSAGSGQKALHLVRIISNL 211
           S+L +K    Q KL      D++ ++VKK  KKEHHLW+KRDSAGSGQKAL+LVRI+S L
Sbjct: 36  SALCVKCSKKQLKLNS--RADENRKVVKKSGKKEHHLWQKRDSAGSGQKALNLVRIVSEL 93

Query: 212 PNEKEAIYGALNKWTAWETEFPVIAAAKALSILR 313
           PNEKEA+YGAL+KWTAWETEFP+IAAAKAL IL+
Sbjct: 94  PNEKEAVYGALDKWTAWETEFPLIAAAKALKILQ 127


>ref|XP_002269512.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
           chloroplastic-like [Vitis vinifera]
          Length = 216

 Score =  122 bits (305), Expect = 4e-26
 Identities = 57/70 (81%), Positives = 64/70 (91%)
 Frame = +2

Query: 104 QIVKKPAKKEHHLWKKRDSAGSGQKALHLVRIISNLPNEKEAIYGALNKWTAWETEFPVI 283
           +I KK  KKEHHLW+KRDS GSGQKAL+LVRI+S LPNEKEA+YGAL+KWTAWETEFP+I
Sbjct: 62  EISKKVGKKEHHLWRKRDSIGSGQKALNLVRIVSELPNEKEAVYGALDKWTAWETEFPLI 121

Query: 284 AAAKALSILR 313
           AAAKAL ILR
Sbjct: 122 AAAKALRILR 131


>emb|CBI30774.3| unnamed protein product [Vitis vinifera]
          Length = 277

 Score =  122 bits (305), Expect = 4e-26
 Identities = 57/70 (81%), Positives = 64/70 (91%)
 Frame = +2

Query: 104 QIVKKPAKKEHHLWKKRDSAGSGQKALHLVRIISNLPNEKEAIYGALNKWTAWETEFPVI 283
           +I KK  KKEHHLW+KRDS GSGQKAL+LVRI+S LPNEKEA+YGAL+KWTAWETEFP+I
Sbjct: 62  EISKKVGKKEHHLWRKRDSIGSGQKALNLVRIVSELPNEKEAVYGALDKWTAWETEFPLI 121

Query: 284 AAAKALSILR 313
           AAAKAL ILR
Sbjct: 122 AAAKALRILR 131


>ref|XP_004164255.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
           chloroplastic-like [Cucumis sativus]
          Length = 270

 Score =  120 bits (301), Expect = 1e-25
 Identities = 58/86 (67%), Positives = 67/86 (77%)
 Frame = +2

Query: 56  NNQSKLPCILSGDKSLQIVKKPAKKEHHLWKKRDSAGSGQKALHLVRIISNLPNEKEAIY 235
           +NQ+  P         ++VKK  K+ HHLWKKRDSAGSGQKAL+LVRI+S  PNEKEA+Y
Sbjct: 38  HNQAAQPLTSFTTPERRVVKKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVY 97

Query: 236 GALNKWTAWETEFPVIAAAKALSILR 313
           G LNKW AWETEFP+IAAAKAL ILR
Sbjct: 98  GELNKWIAWETEFPLIAAAKALRILR 123


>ref|NP_001031667.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|332658716|gb|AEE84116.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 260

 Score =  120 bits (301), Expect = 1e-25
 Identities = 55/68 (80%), Positives = 61/68 (89%)
 Frame = +2

Query: 110 VKKPAKKEHHLWKKRDSAGSGQKALHLVRIISNLPNEKEAIYGALNKWTAWETEFPVIAA 289
           +KK  KKEHHLWKK DSAGSGQKAL+LVR++S LPNEKEA+YGALNKW AWE EFP+IAA
Sbjct: 48  IKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEFPIIAA 107

Query: 290 AKALSILR 313
           AKAL ILR
Sbjct: 108 AKALQILR 115