BLASTX nr result
ID: Dioscorea21_contig00017036
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00017036
(248 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001061515.1| Os08g0314800 [Oryza sativa Japonica Group] g... 144 6e-33
gb|AAQ56342.1| putative poly(A)-binding protein [Oryza sativa Ja... 144 6e-33
dbj|BAJ97269.1| predicted protein [Hordeum vulgare subsp. vulgare] 144 7e-33
dbj|BAJ90169.1| predicted protein [Hordeum vulgare subsp. vulgar... 144 7e-33
ref|NP_001062583.1| Os09g0115400 [Oryza sativa Japonica Group] g... 143 2e-32
>ref|NP_001061515.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|35215045|dbj|BAC92404.1| putative
polyadenylate-binding protein [Oryza sativa Japonica
Group] gi|35215184|dbj|BAC92537.1| putative
polyadenylate-binding protein [Oryza sativa Japonica
Group] gi|113623484|dbj|BAF23429.1| Os08g0314800 [Oryza
sativa Japonica Group] gi|215694402|dbj|BAG89395.1|
unnamed protein product [Oryza sativa Japonica Group]
gi|258644698|dbj|BAI39945.1| putative poly(A)-binding
protein [Oryza sativa Indica Group]
Length = 660
Score = 144 bits (364), Expect = 6e-33
Identities = 70/82 (85%), Positives = 77/82 (93%)
Frame = +2
Query: 2 AANIFIKNLDKSIDNKTLFDTFSVFGNILTCKVATDSSGQSKGYGFVQYEEVEAAQNAIE 181
AANIFIKNLDKSIDNK L+DTFSVFGNIL+CKVAT+ SG+SKGYGFVQ+E EAAQNAI
Sbjct: 126 AANIFIKNLDKSIDNKALYDTFSVFGNILSCKVATEMSGESKGYGFVQFELEEAAQNAIS 185
Query: 182 RLNGMLLNDKKVYVGPFLRKQE 247
+LNGMLLNDKKVYVGPF+RKQE
Sbjct: 186 KLNGMLLNDKKVYVGPFVRKQE 207
Score = 69.3 bits (168), Expect = 3e-10
Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = +2
Query: 8 NIFIKNLDKSIDN-KTLFDTFSVFGNILTCKVATDSSGQSKGYGFVQYEEVEAAQNAIER 184
N+++KNLD SID+ + L + F+ FG I +CKV D +G SKG GFV ++ E A A+
Sbjct: 322 NLYLKNLDDSIDDDEKLKEIFADFGTITSCKVMRDLNGVSKGSGFVAFKSAEDASRALVA 381
Query: 185 LNGMLLNDKKVYVGPFLRKQE 247
+NG ++ K +YV RK+E
Sbjct: 382 MNGKMIGSKPLYVALAQRKEE 402
Score = 57.8 bits (138), Expect = 9e-07
Identities = 29/80 (36%), Positives = 45/80 (56%)
Frame = +2
Query: 8 NIFIKNLDKSIDNKTLFDTFSVFGNILTCKVATDSSGQSKGYGFVQYEEVEAAQNAIERL 187
N+++KNL +S L + F FG I + V + G+S+ +GFV +E + A A+E L
Sbjct: 219 NVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSRCFGFVNFENPDDAARAVEDL 278
Query: 188 NGMLLNDKKVYVGPFLRKQE 247
NG +DK+ YV +K E
Sbjct: 279 NGKKFDDKEWYVCRAQKKSE 298
>gb|AAQ56342.1| putative poly(A)-binding protein [Oryza sativa Japonica Group]
gi|125561054|gb|EAZ06502.1| hypothetical protein
OsI_28747 [Oryza sativa Indica Group]
gi|125602953|gb|EAZ42278.1| hypothetical protein
OsJ_26851 [Oryza sativa Japonica Group]
Length = 456
Score = 144 bits (364), Expect = 6e-33
Identities = 70/82 (85%), Positives = 77/82 (93%)
Frame = +2
Query: 2 AANIFIKNLDKSIDNKTLFDTFSVFGNILTCKVATDSSGQSKGYGFVQYEEVEAAQNAIE 181
AANIFIKNLDKSIDNK L+DTFSVFGNIL+CKVAT+ SG+SKGYGFVQ+E EAAQNAI
Sbjct: 126 AANIFIKNLDKSIDNKALYDTFSVFGNILSCKVATEMSGESKGYGFVQFELEEAAQNAIS 185
Query: 182 RLNGMLLNDKKVYVGPFLRKQE 247
+LNGMLLNDKKVYVGPF+RKQE
Sbjct: 186 KLNGMLLNDKKVYVGPFVRKQE 207
Score = 69.3 bits (168), Expect = 3e-10
Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = +2
Query: 8 NIFIKNLDKSIDN-KTLFDTFSVFGNILTCKVATDSSGQSKGYGFVQYEEVEAAQNAIER 184
N+++KNLD SID+ + L + F+ FG I +CKV D +G SKG GFV ++ E A A+
Sbjct: 322 NLYLKNLDDSIDDDEKLKEIFADFGTITSCKVMRDLNGVSKGSGFVAFKSAEDASRALVA 381
Query: 185 LNGMLLNDKKVYVGPFLRKQE 247
+NG ++ K +YV RK+E
Sbjct: 382 MNGKMIGSKPLYVALAQRKEE 402
Score = 57.8 bits (138), Expect = 9e-07
Identities = 29/80 (36%), Positives = 45/80 (56%)
Frame = +2
Query: 8 NIFIKNLDKSIDNKTLFDTFSVFGNILTCKVATDSSGQSKGYGFVQYEEVEAAQNAIERL 187
N+++KNL +S L + F FG I + V + G+S+ +GFV +E + A A+E L
Sbjct: 219 NVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSRCFGFVNFENPDDAARAVEDL 278
Query: 188 NGMLLNDKKVYVGPFLRKQE 247
NG +DK+ YV +K E
Sbjct: 279 NGKKFDDKEWYVCRAQKKSE 298
>dbj|BAJ97269.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 144 bits (363), Expect = 7e-33
Identities = 69/82 (84%), Positives = 76/82 (92%)
Frame = +2
Query: 2 AANIFIKNLDKSIDNKTLFDTFSVFGNILTCKVATDSSGQSKGYGFVQYEEVEAAQNAIE 181
AANIFIKNLDKSIDNK L+DTFS FGNIL+CKVAT+ SG+SKGYGFVQYE+ E+AQNAI
Sbjct: 129 AANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAIN 188
Query: 182 RLNGMLLNDKKVYVGPFLRKQE 247
LNGMLLNDKKVYVGPF+RKQE
Sbjct: 189 ELNGMLLNDKKVYVGPFVRKQE 210
Score = 68.6 bits (166), Expect = 5e-10
Identities = 34/81 (41%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Frame = +2
Query: 8 NIFIKNLDKSIDN-KTLFDTFSVFGNILTCKVATDSSGQSKGYGFVQYEEVEAAQNAIER 184
N+++KNLD S+D+ + L + F+ FG I +CKV DS+G +KG GFV ++ E A A+
Sbjct: 325 NLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVA 384
Query: 185 LNGMLLNDKKVYVGPFLRKQE 247
+NG ++ K +YV RK+E
Sbjct: 385 MNGKMVGSKPLYVALAQRKEE 405
Score = 60.8 bits (146), Expect = 1e-07
Identities = 30/80 (37%), Positives = 47/80 (58%)
Frame = +2
Query: 8 NIFIKNLDKSIDNKTLFDTFSVFGNILTCKVATDSSGQSKGYGFVQYEEVEAAQNAIERL 187
N+++KNL +S L + F FG I + V G+S+ +GFV +E + A +A+E L
Sbjct: 222 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDL 281
Query: 188 NGMLLNDKKVYVGPFLRKQE 247
NG +DK++YVG +K E
Sbjct: 282 NGKKFDDKELYVGRAQKKSE 301
>dbj|BAJ90169.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511122|dbj|BAJ87575.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 663
Score = 144 bits (363), Expect = 7e-33
Identities = 69/82 (84%), Positives = 76/82 (92%)
Frame = +2
Query: 2 AANIFIKNLDKSIDNKTLFDTFSVFGNILTCKVATDSSGQSKGYGFVQYEEVEAAQNAIE 181
AANIFIKNLDKSIDNK L+DTFS FGNIL+CKVAT+ SG+SKGYGFVQYE+ E+AQNAI
Sbjct: 129 AANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAIN 188
Query: 182 RLNGMLLNDKKVYVGPFLRKQE 247
LNGMLLNDKKVYVGPF+RKQE
Sbjct: 189 ELNGMLLNDKKVYVGPFVRKQE 210
Score = 68.6 bits (166), Expect = 5e-10
Identities = 34/81 (41%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Frame = +2
Query: 8 NIFIKNLDKSIDN-KTLFDTFSVFGNILTCKVATDSSGQSKGYGFVQYEEVEAAQNAIER 184
N+++KNLD S+D+ + L + F+ FG I +CKV DS+G +KG GFV ++ E A A+
Sbjct: 325 NLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVA 384
Query: 185 LNGMLLNDKKVYVGPFLRKQE 247
+NG ++ K +YV RK+E
Sbjct: 385 MNGKMVGSKPLYVALAQRKEE 405
Score = 60.8 bits (146), Expect = 1e-07
Identities = 30/80 (37%), Positives = 47/80 (58%)
Frame = +2
Query: 8 NIFIKNLDKSIDNKTLFDTFSVFGNILTCKVATDSSGQSKGYGFVQYEEVEAAQNAIERL 187
N+++KNL +S L + F FG I + V G+S+ +GFV +E + A +A+E L
Sbjct: 222 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDL 281
Query: 188 NGMLLNDKKVYVGPFLRKQE 247
NG +DK++YVG +K E
Sbjct: 282 NGKKFDDKELYVGRAQKKSE 301
>ref|NP_001062583.1| Os09g0115400 [Oryza sativa Japonica Group]
gi|46389987|dbj|BAD16229.1| putative poly(A)-binding
protein [Oryza sativa Japonica Group]
gi|113630816|dbj|BAF24497.1| Os09g0115400 [Oryza sativa
Japonica Group] gi|125562753|gb|EAZ08133.1| hypothetical
protein OsI_30396 [Oryza sativa Indica Group]
gi|125604734|gb|EAZ43770.1| hypothetical protein
OsJ_28392 [Oryza sativa Japonica Group]
gi|169244485|gb|ACA50516.1| poly(A)-binding protein
[Oryza sativa Japonica Group]
gi|215695451|dbj|BAG90618.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 662
Score = 143 bits (360), Expect = 2e-32
Identities = 68/81 (83%), Positives = 76/81 (93%)
Frame = +2
Query: 5 ANIFIKNLDKSIDNKTLFDTFSVFGNILTCKVATDSSGQSKGYGFVQYEEVEAAQNAIER 184
ANIFIKNLDKSIDNK L+DTF VFGNIL+CKVATD+SG+SKGYGFVQYE EAAQ AI++
Sbjct: 128 ANIFIKNLDKSIDNKALYDTFCVFGNILSCKVATDASGESKGYGFVQYERDEAAQAAIDK 187
Query: 185 LNGMLLNDKKVYVGPFLRKQE 247
LNGML+NDKKVYVGPF+RKQE
Sbjct: 188 LNGMLMNDKKVYVGPFIRKQE 208
Score = 70.1 bits (170), Expect = 2e-10
Identities = 31/80 (38%), Positives = 51/80 (63%)
Frame = +2
Query: 8 NIFIKNLDKSIDNKTLFDTFSVFGNILTCKVATDSSGQSKGYGFVQYEEVEAAQNAIERL 187
N+++KNLD S+D+ L + F+ +G I +CKV DS+G S+G GFV ++ E A A+ +
Sbjct: 323 NLYLKNLDDSVDDDKLRELFAEYGTITSCKVMRDSNGVSRGSGFVAFKSAEDASRALAEM 382
Query: 188 NGMLLNDKKVYVGPFLRKQE 247
N ++ K +YV RK++
Sbjct: 383 NSKMVGSKPLYVALAQRKED 402
Score = 61.6 bits (148), Expect = 6e-08
Identities = 29/80 (36%), Positives = 46/80 (57%)
Frame = +2
Query: 8 NIFIKNLDKSIDNKTLFDTFSVFGNILTCKVATDSSGQSKGYGFVQYEEVEAAQNAIERL 187
N+++KNL ++ L + F FG I + V + G+SK +GFV +E + A A++ L
Sbjct: 220 NVYVKNLSENTTEDDLKEIFGKFGTITSAVVMREGDGRSKCFGFVNFESPDDAAQAVQEL 279
Query: 188 NGMLLNDKKVYVGPFLRKQE 247
NG +DK+ YVG +K E
Sbjct: 280 NGKKFDDKEWYVGRAQKKSE 299