BLASTX nr result

ID: Dioscorea21_contig00016874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016874
         (621 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274465.2| PREDICTED: uncharacterized protein LOC100250...    84   2e-14
emb|CAN60165.1| hypothetical protein VITISV_040087 [Vitis vinifera]    84   2e-14
ref|XP_002279146.1| PREDICTED: uncharacterized protein LOC100257...    81   1e-13
ref|XP_002311332.1| predicted protein [Populus trichocarpa] gi|2...    67   3e-09
ref|XP_002512100.1| ATP binding protein, putative [Ricinus commu...    66   4e-09

>ref|XP_002274465.2| PREDICTED: uncharacterized protein LOC100250913 [Vitis vinifera]
          Length = 550

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 60/171 (35%), Positives = 83/171 (48%), Gaps = 4/171 (2%)
 Frame = +3

Query: 120 TCN-TFDECSRLESPVGASFIP-YFEDDLRIDGHNHHEETCSWPLDYHERKPVAIGSDHQ 293
           +CN + +E  R  +   +S  P YFE  L        E+  S  LD   R+ V +G DHQ
Sbjct: 82  SCNGSSEEDGRSVAAAYSSLSPEYFESYLPRRTVAQFEDIYSSLLDCSPRRQVPVGPDHQ 141

Query: 294 ADIPVCGLSEFENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKWIGACILPMPDYG 473
           A++PV  L + +N                                ++W+G C++PMP+  
Sbjct: 142 ANVPVWSLQKVKNRLDKLETSNRYISSSQSMVSDQTVDGENE---ERWMGTCVIPMPEEN 198

Query: 474 TLSLE--VKGRPHQNLCNCLDMGSIRCVKQHVVESREKLEQALGHEKFMML 620
            LS E  VK    +  C CLD  SIRCV+QHV+E+REKL + LG EKFM L
Sbjct: 199 -LSAENGVKTGDGRTDCGCLDNDSIRCVRQHVMEAREKLRKTLGQEKFMEL 248


>emb|CAN60165.1| hypothetical protein VITISV_040087 [Vitis vinifera]
          Length = 605

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 60/171 (35%), Positives = 83/171 (48%), Gaps = 4/171 (2%)
 Frame = +3

Query: 120 TCN-TFDECSRLESPVGASFIP-YFEDDLRIDGHNHHEETCSWPLDYHERKPVAIGSDHQ 293
           +CN + +E  R  +   +S  P YFE  L        E+  S  LD   R+ V +G DHQ
Sbjct: 137 SCNGSSEEDGRSVAAAYSSLSPEYFESYLPRRTVAQFEDIYSSLLDCSPRRQVPVGPDHQ 196

Query: 294 ADIPVCGLSEFENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKWIGACILPMPDYG 473
           A++PV  L + +N                                ++W+G C++PMP+  
Sbjct: 197 ANVPVWSLQKVKNRLDKLETSNRYISSSQSMVSDQTVDGENE---ERWMGTCVIPMPEEN 253

Query: 474 TLSLE--VKGRPHQNLCNCLDMGSIRCVKQHVVESREKLEQALGHEKFMML 620
            LS E  VK    +  C CLD  SIRCV+QHV+E+REKL + LG EKFM L
Sbjct: 254 -LSAENGVKTGDGRTDCGCLDNDSIRCVRQHVMEAREKLRKTLGQEKFMEL 303


>ref|XP_002279146.1| PREDICTED: uncharacterized protein LOC100257666 [Vitis vinifera]
           gi|147800960|emb|CAN60122.1| hypothetical protein
           VITISV_037127 [Vitis vinifera]
           gi|296082992|emb|CBI22293.3| unnamed protein product
           [Vitis vinifera]
          Length = 372

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 64/204 (31%), Positives = 95/204 (46%), Gaps = 6/204 (2%)
 Frame = +3

Query: 27  DEFQSYVGNSDDSGDTPADDNPSSTL-SVS---WQTCNTFDECSRLESPVGASFIP-YFE 191
           DE ++ +    D  + PA D  +S L S+S   W   +T +E  + E+    SF P YFE
Sbjct: 61  DEGRNAIDLVTDVSNGPAKDFETSALGSISGFLWLNSSTIEE-DKSEAAFHLSFFPEYFE 119

Query: 192 DDLRIDGHNHHEETCSWPLDYHERKPVAIGSDHQADIPVCGLSEFENXXXXXXXXXXXXX 371
            D  +     HE+  S  LD+  +K V+IG +HQA IP       EN             
Sbjct: 120 ADHGVRAVIQHEDIFSSLLDHPPQKLVSIGPEHQALIPEWAPQLLENSLDYSDTSGFMNG 179

Query: 372 XXXXXXXXXXXXXXXXXXXDKWIGACILPMPDYGTLSLEV-KGRPHQNLCNCLDMGSIRC 548
                              ++ +G  ++PMPD+  L+    KG    N CNCL +GSI C
Sbjct: 180 GKE----------------EELMGTIVIPMPDWEPLAYNFCKGGGIGNECNCLHVGSISC 223

Query: 549 VKQHVVESREKLEQALGHEKFMML 620
            +QHV+E+R++L + LG + F  L
Sbjct: 224 TRQHVMEARQRLRENLGQDMFEKL 247


>ref|XP_002311332.1| predicted protein [Populus trichocarpa] gi|222851152|gb|EEE88699.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 45/147 (30%), Positives = 66/147 (44%), Gaps = 1/147 (0%)
 Frame = +3

Query: 183 YFEDDLRIDGHNHHEETCSWPLDYHERKPVAIGSDHQADIPVCGLSEFENXXXXXXXXXX 362
           YFE +       H  +  S  LD   RK V +G +HQA IP+      ++          
Sbjct: 110 YFEAEFPQKTSIHLADVYSSYLDEFPRKQVPLGPNHQASIPLWDRHMKKDKLADSFNTNG 169

Query: 363 XXXXXXXXXXXXXXXXXXXXXXDKWIGACILPMPDYGT-LSLEVKGRPHQNLCNCLDMGS 539
                                 +K +G CI+PMPD    LS   +    +  C CLD GS
Sbjct: 170 SSLSESDHHIYNDNE-------EKLVGTCIIPMPDTKPCLSTRYEAACGRIDCECLDEGS 222

Query: 540 IRCVKQHVVESREKLEQALGHEKFMML 620
           +RC +QH++E+RE+L ++ GHE F+ L
Sbjct: 223 VRCAQQHILEAREELLKSTGHENFVNL 249


>ref|XP_002512100.1| ATP binding protein, putative [Ricinus communis]
           gi|223549280|gb|EEF50769.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 527

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 44/128 (34%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
 Frame = +3

Query: 246 LDYHERKPVAIGSDHQADIPVCGLSEFENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 425
           LD   RK V +G +HQA IP+ G    +N                               
Sbjct: 128 LDSSPRKQVPLGPNHQASIPLFGKRVNKNQLEWEDTLDPGSSSLSESDLDIHTDNE---- 183

Query: 426 XDKWIGACILPMPDYGTL---SLEVKGRPHQNLCNCLDMGSIRCVKQHVVESREKLEQAL 596
            +K++G CI+PMPD  T    S E+ G      C+C+D GS RCV+QH++E+RE L + L
Sbjct: 184 -EKFLGTCIIPMPDTETSADNSDEIGGGRKD--CSCMDEGSGRCVQQHIMEARESLLKFL 240

Query: 597 GHEKFMML 620
           GHE+ + L
Sbjct: 241 GHEQLVHL 248


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