BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016467
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB47665.1| retrotransposon protein, putative, unclassified, ...   210   9e-53
gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group]     205   3e-51
gb|AAT47108.1| putative polyprotein [Oryza sativa Japonica Group]     196   2e-48
gb|ADB85253.1| putative retrotransposon protein [Phyllostachys e...   184   9e-45
ref|NP_001174869.1| Os06g0583500 [Oryza sativa Japonica Group] g...   174   5e-42

>gb|ABB47665.1| retrotransposon protein, putative, unclassified, expressed [Oryza
           sativa Japonica Group] gi|78708691|gb|ABB47666.1|
           retrotransposon protein, putative, unclassified,
           expressed [Oryza sativa Japonica Group]
          Length = 1682

 Score =  210 bits (535), Expect = 9e-53
 Identities = 105/184 (57%), Positives = 132/184 (71%), Gaps = 9/184 (4%)
 Frame = -1

Query: 526 SVSYVPRLSMSLMSVSQLTDHNCKVIFDRTSCHV*D-HSGAVIGAGRRHS---GVYVLDS 359
           +VS VP+LSM+L+SV QLTD NC V FD TSC V D H+GAVIG G R     G+Y+LDS
Sbjct: 238 NVSLVPKLSMNLISVGQLTDTNCFVGFDDTSCFVQDRHTGAVIGTGHRQKRSCGLYILDS 297

Query: 358 LHLSSSVGPVHHCYASVLSPH-----MWHHRLGHLCPTRLSSLVRLGVLGAVSPSSDVVC 194
           L L SS       Y+ + S        WHHRLGHLC +RL++L+  GVLG+V   +  VC
Sbjct: 298 LSLPSSSTNTPSVYSPMCSTACKSFPQWHHRLGHLCGSRLATLINQGVLGSVPVDTTFVC 357

Query: 193 LGCKLGKQLQRPYPLSVSQTAAPFELIHSDVWGPAPFVSKGGNRYYVLFIDDYTRFTWIY 14
            GCKLGKQ+Q PYP S S+++ PF+L+HSDVWG +PF SKGG+ YYV+F+DDY+R+TWIY
Sbjct: 358 KGCKLGKQVQLPYPSSTSRSSRPFDLVHSDVWGKSPFPSKGGHNYYVIFVDDYSRYTWIY 417

Query: 13  FMHH 2
           FM H
Sbjct: 418 FMKH 421


>gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1419

 Score =  205 bits (522), Expect = 3e-51
 Identities = 104/193 (53%), Positives = 135/193 (69%), Gaps = 19/193 (9%)
 Frame = -1

Query: 523  VSYVPRLSMSLMSVSQLTDHNCKVIFDRTSCHV*DHS-GAVIGAGRRHSG---VYVLDSL 356
            V YVP LSM L+SV QLTD  C V+FD  +C+V D + G ++GAG R +G   +YVLD L
Sbjct: 542  VFYVPNLSMKLISVGQLTDMKCHVVFDEAACYVLDRATGNLVGAGHRLNGPRGLYVLDHL 601

Query: 355  HLSSSVG---PVHHCYASVLSPH------------MWHHRLGHLCPTRLSSLVRLGVLGA 221
            HL +S     P +   A+ ++ +             WHHRLGHLC +RLS+LV+ GVLG 
Sbjct: 602  HLPTSTSSGFPGNSASATSITSNSSVYSSLSASFPQWHHRLGHLCGSRLSTLVQQGVLGN 661

Query: 220  VSPSSDVVCLGCKLGKQLQRPYPLSVSQTAAPFELIHSDVWGPAPFVSKGGNRYYVLFID 41
            VS  +D VC GCKLGKQ+Q PY  S+S++ +PF L+HSDVWGPAPF SKGG+RYYV+F+D
Sbjct: 662  VSIETDFVCKGCKLGKQVQLPYRSSMSRSTSPFALVHSDVWGPAPFHSKGGHRYYVIFVD 721

Query: 40   DYTRFTWIYFMHH 2
            D++R+TWIYFM H
Sbjct: 722  DFSRYTWIYFMKH 734


>gb|AAT47108.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1204

 Score =  196 bits (498), Expect = 2e-48
 Identities = 101/182 (55%), Positives = 129/182 (70%), Gaps = 7/182 (3%)
 Frame = -1

Query: 526 SVSYVPRLSMSLMSVSQLTDHNCKVIFDRTSCHV*DH-SGAVIGAGRRHSG---VYVLDS 359
           +VSYVP+L+M LMS  QLTDH C+VI D  SC V DH +G ++G G R      ++ LD 
Sbjct: 413 AVSYVPKLAMQLMSAGQLTDHGCRVILDSDSCCVQDHRTGLLVGTGPRRRDSQRLWELDW 472

Query: 358 LHLSSSVGP--VHHCYASVLSPHMWHHRLGHLCPTRLSSLVRLGVLGAVSPSSDV-VCLG 188
           L L S+     +    +S +S   WHHRLGHLC +RLS+LVR G+LG+VS +  +  C G
Sbjct: 473 LRLPSAAPASLLASTASSTVSFAQWHHRLGHLCGSRLSALVRRGLLGSVSGAVSLNQCQG 532

Query: 187 CKLGKQLQRPYPLSVSQTAAPFELIHSDVWGPAPFVSKGGNRYYVLFIDDYTRFTWIYFM 8
           CKLGKQ+Q PY  S S +  PF+L+HSDVWGPAPFVSKGG+RYY++FIDD++R TWIYFM
Sbjct: 533 CKLGKQIQLPYHSSESVSKRPFDLVHSDVWGPAPFVSKGGHRYYIIFIDDFSRHTWIYFM 592

Query: 7   HH 2
            H
Sbjct: 593 TH 594


>gb|ADB85253.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 861

 Score =  184 bits (466), Expect = 9e-45
 Identities = 96/181 (53%), Positives = 124/181 (68%), Gaps = 10/181 (5%)
 Frame = -1

Query: 526 SVSYVPRLSMSLMSVSQLTDHNCKVIFDRTSCHV*DH-SGAVIGAGRRH---SGVYVLDS 359
           +VS+VP+L+M L+SV QLTD  C+V FD  +  V D  +G  +G GRR     G+Y+LD 
Sbjct: 304 AVSHVPQLTMQLLSVGQLTDLGCRVGFDSHTYFVQDRQTGTSLGTGRRRRDRQGLYILDR 363

Query: 358 LHL-SSSVGPVHHCYASVLSPH-----MWHHRLGHLCPTRLSSLVRLGVLGAVSPSSDVV 197
           LHL S+SV P+     +  +        WHHRLGHLC + LSSLVR GVLG V   + + 
Sbjct: 364 LHLPSASVAPITSTSTATAAATSGVFAQWHHRLGHLCGSCLSSLVRQGVLGRVPVDTSMF 423

Query: 196 CLGCKLGKQLQRPYPLSVSQTAAPFELIHSDVWGPAPFVSKGGNRYYVLFIDDYTRFTWI 17
           C GCKLGK LQ PY  S S ++ PF+L+HSDVWGPAP +SKGG++ YV+FIDDY+RFTWI
Sbjct: 424 CQGCKLGKWLQLPYHSSESLSSRPFDLVHSDVWGPAPIISKGGHKSYVIFIDDYSRFTWI 483

Query: 16  Y 14
           +
Sbjct: 484 F 484


>ref|NP_001174869.1| Os06g0583500 [Oryza sativa Japonica Group]
           gi|255677175|dbj|BAH93597.1| Os06g0583500, partial
           [Oryza sativa Japonica Group]
          Length = 174

 Score =  174 bits (442), Expect = 5e-42
 Identities = 84/146 (57%), Positives = 105/146 (71%), Gaps = 10/146 (6%)
 Frame = -1

Query: 409 AVIGAGRRHSG----VYVLDSLHL------SSSVGPVHHCYASVLSPHMWHHRLGHLCPT 260
           A++G G RHS     +YVLD L L      S++       YAS  +   WHHRLGHLC +
Sbjct: 21  ALVGTGHRHSSSPGKLYVLDHLSLPPSSFGSTTTSSTALGYASSTTFPQWHHRLGHLCGS 80

Query: 259 RLSSLVRLGVLGAVSPSSDVVCLGCKLGKQLQRPYPLSVSQTAAPFELIHSDVWGPAPFV 80
           RLS+L+R GVLG VS  +   C GCKLGKQ+Q PYP+S S+T+ PF+L+HSDVWGPAPF 
Sbjct: 81  RLSTLIRQGVLGHVSIDTTFDCTGCKLGKQIQLPYPISNSRTSCPFDLVHSDVWGPAPFA 140

Query: 79  SKGGNRYYVLFIDDYTRFTWIYFMHH 2
           SKGG++YYV+FIDDY+R+TWIYFM H
Sbjct: 141 SKGGHKYYVIFIDDYSRYTWIYFMKH 166