BLASTX nr result

ID: Dioscorea21_contig00016466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016466
         (951 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK06901.1| predicted protein [Hordeum vulgare subsp. vulgare]    322   8e-86
ref|XP_003577604.1| PREDICTED: ATP-dependent RNA helicase dhx8-l...   320   2e-85
gb|EEC68064.1| hypothetical protein OsI_35917 [Oryza sativa Indi...   313   4e-83
ref|XP_002436584.1| hypothetical protein SORBIDRAFT_10g005130 [S...   312   9e-83
ref|NP_001067756.2| Os11g0310800 [Oryza sativa Japonica Group] g...   309   6e-82

>dbj|BAK06901.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 707

 Score =  322 bits (825), Expect = 8e-86
 Identities = 161/240 (67%), Positives = 190/240 (79%), Gaps = 3/240 (1%)
 Frame = -1

Query: 918  SKGNDRKRKQPSELPDGGGWGDHIQLLQVYEAWDQVDYDPRWCTDNDLQVRTMVFAKDVR 739
            SK  + KRK+  ELPDG GWGDH+QLLQ++E+WDQ DYDPRWC+D+DLQVR M F+KDVR
Sbjct: 476  SKDMEGKRKR-QELPDGSGWGDHVQLLQIFESWDQADYDPRWCSDHDLQVRGMKFSKDVR 534

Query: 738  KQLSQIIQKIAKGPCDVESGIRQKRSDKDYRNLRRALCKGYGNQLAERMLRHNGYKTIGY 559
             QLSQIIQKIAKGP D+++  R ++SD DYR LRRALC GYGNQLAERM+ HNGY T+GY
Sbjct: 535  NQLSQIIQKIAKGPTDLQAR-RGRKSDPDYRKLRRALCVGYGNQLAERMIHHNGYHTVGY 593

Query: 558  RSQLVQVHPSSVLESDENGCLPDYVVYHELINISRPFMRNVCAVEMAWAMPILRKLEKMD 379
            R+QLVQVHPSSVLE DE G LP YVVYHELIN +RPFMRNVC VE  W  PIL+KLEK++
Sbjct: 594  RTQLVQVHPSSVLEGDEYGKLPVYVVYHELINTTRPFMRNVCGVEQTWVKPILKKLEKLN 653

Query: 378  INKLRGGSYDSKVENKSVENEAIQKQNPEETTKKPA---EDVDSKIQAARERYLARKAKK 208
            INKL GGS      +   ++E+++++ P   TK  A    DVDSKIQAARERYLARK KK
Sbjct: 654  INKLSGGS------SALTDSESLEEKQPGSPTKAAAAKQSDVDSKIQAARERYLARKGKK 707


>ref|XP_003577604.1| PREDICTED: ATP-dependent RNA helicase dhx8-like [Brachypodium
            distachyon]
          Length = 706

 Score =  320 bits (821), Expect = 2e-85
 Identities = 161/237 (67%), Positives = 191/237 (80%)
 Frame = -1

Query: 918  SKGNDRKRKQPSELPDGGGWGDHIQLLQVYEAWDQVDYDPRWCTDNDLQVRTMVFAKDVR 739
            SK  +RKRK+  ELPDG GWGDHIQLLQ++E+WDQ DYDP+WC+D+DLQ R M F+KDVR
Sbjct: 475  SKEIERKRKR-RELPDGSGWGDHIQLLQIFESWDQADYDPKWCSDHDLQARGMKFSKDVR 533

Query: 738  KQLSQIIQKIAKGPCDVESGIRQKRSDKDYRNLRRALCKGYGNQLAERMLRHNGYKTIGY 559
             QLSQIIQKIAKGP D+++  R ++SD DYR LR+ALC GYGNQLAERML HNGY T+GY
Sbjct: 534  NQLSQIIQKIAKGPTDLQAR-RGRKSDPDYRKLRKALCVGYGNQLAERMLHHNGYHTVGY 592

Query: 558  RSQLVQVHPSSVLESDENGCLPDYVVYHELINISRPFMRNVCAVEMAWAMPILRKLEKMD 379
            R+QLVQVHPSSVLE DE G LP YVVYHELIN +RPFMRNVCAVE AW  PIL+KLEK++
Sbjct: 593  RTQLVQVHPSSVLEGDEYGKLPVYVVYHELINTTRPFMRNVCAVEQAWVKPILKKLEKLN 652

Query: 378  INKLRGGSYDSKVENKSVENEAIQKQNPEETTKKPAEDVDSKIQAARERYLARKAKK 208
            I KL GGS  +  +++ + N+  Q  +P + T+    DVDSKIQAARERYLARK KK
Sbjct: 653  IKKLSGGS-TAPTDSEPLGNK--QVSSPTKATEIKQSDVDSKIQAARERYLARKGKK 706


>gb|EEC68064.1| hypothetical protein OsI_35917 [Oryza sativa Indica Group]
          Length = 708

 Score =  313 bits (802), Expect = 4e-83
 Identities = 157/237 (66%), Positives = 190/237 (80%)
 Frame = -1

Query: 918  SKGNDRKRKQPSELPDGGGWGDHIQLLQVYEAWDQVDYDPRWCTDNDLQVRTMVFAKDVR 739
            SK  + KRK+  ELPDG GWGDHIQLLQ++E+WD+  YDPRWC+D++LQVR M F+KDVR
Sbjct: 477  SKDMEGKRKR-QELPDGSGWGDHIQLLQIFESWDRTGYDPRWCSDHELQVRGMKFSKDVR 535

Query: 738  KQLSQIIQKIAKGPCDVESGIRQKRSDKDYRNLRRALCKGYGNQLAERMLRHNGYKTIGY 559
             QLSQIIQKIAKG  DV++  ++++SD DYR LRRALC GYGNQLAERML HNGY T+GY
Sbjct: 536  NQLSQIIQKIAKGSTDVQAK-KERKSDPDYRKLRRALCVGYGNQLAERMLHHNGYHTVGY 594

Query: 558  RSQLVQVHPSSVLESDENGCLPDYVVYHELINISRPFMRNVCAVEMAWAMPILRKLEKMD 379
            R+QLVQVHP SVLE DE G LP YVVYHELIN +RPFMRNVCAV+ +W  PIL+KLE++D
Sbjct: 595  RAQLVQVHPFSVLEGDEYGKLPVYVVYHELINTTRPFMRNVCAVDQSWVKPILKKLERLD 654

Query: 378  INKLRGGSYDSKVENKSVENEAIQKQNPEETTKKPAEDVDSKIQAARERYLARKAKK 208
            +NKL GGS  SK + + +E++  Q  +P++       DVDSKIQAARERYLARK KK
Sbjct: 655  MNKLSGGSSGSK-DPEPLEDK--QVSSPKKAMDVKQSDVDSKIQAARERYLARKGKK 708


>ref|XP_002436584.1| hypothetical protein SORBIDRAFT_10g005130 [Sorghum bicolor]
            gi|241914807|gb|EER87951.1| hypothetical protein
            SORBIDRAFT_10g005130 [Sorghum bicolor]
          Length = 705

 Score =  312 bits (799), Expect = 9e-83
 Identities = 159/249 (63%), Positives = 188/249 (75%), Gaps = 3/249 (1%)
 Frame = -1

Query: 945  SVLTREC---ACSKGNDRKRKQPSELPDGGGWGDHIQLLQVYEAWDQVDYDPRWCTDNDL 775
            S+L+ E    + SK  D KRK+  ELPDG GWGDHIQLLQ++E+WDQ  YDPRWC+D+DL
Sbjct: 461  SILSAEITLRSASKDMDGKRKR-QELPDGSGWGDHIQLLQIFESWDQSGYDPRWCSDHDL 519

Query: 774  QVRTMVFAKDVRKQLSQIIQKIAKGPCDVESGIRQKRSDKDYRNLRRALCKGYGNQLAER 595
            QVR+M  +KDVR QL QII+KIAKG  DV +  + ++SD DYR LRRALC GYGNQLAER
Sbjct: 520  QVRSMKLSKDVRNQLCQIIKKIAKGSTDVHAR-KSRKSDPDYRKLRRALCVGYGNQLAER 578

Query: 594  MLRHNGYKTIGYRSQLVQVHPSSVLESDENGCLPDYVVYHELINISRPFMRNVCAVEMAW 415
            ML HNGY T+GYRSQLVQVHPSSVLE DE G  P YV+YHELI  +RP+MRN+CAVE AW
Sbjct: 579  MLHHNGYHTVGYRSQLVQVHPSSVLEGDEYGKFPMYVIYHELICTTRPYMRNICAVEQAW 638

Query: 414  AMPILRKLEKMDINKLRGGSYDSKVENKSVENEAIQKQNPEETTKKPAEDVDSKIQAARE 235
              PIL+KLEK+D+NKL GGS   K     VEN+ +     +   K+   +VDSKIQAARE
Sbjct: 639  VEPILKKLEKLDVNKLSGGSSAPKDSELLVENKQVNSLKKDMDVKQ--SEVDSKIQAARE 696

Query: 234  RYLARKAKK 208
            RYLARK KK
Sbjct: 697  RYLARKGKK 705


>ref|NP_001067756.2| Os11g0310800 [Oryza sativa Japonica Group]
            gi|108864297|gb|ABA92900.2| Helicase associated domain
            family protein, expressed [Oryza sativa Japonica Group]
            gi|222615892|gb|EEE52024.1| hypothetical protein
            OsJ_33742 [Oryza sativa Japonica Group]
            gi|255680028|dbj|BAF28119.2| Os11g0310800 [Oryza sativa
            Japonica Group]
          Length = 708

 Score =  309 bits (792), Expect = 6e-82
 Identities = 156/237 (65%), Positives = 189/237 (79%)
 Frame = -1

Query: 918  SKGNDRKRKQPSELPDGGGWGDHIQLLQVYEAWDQVDYDPRWCTDNDLQVRTMVFAKDVR 739
            SK  + KRK+  ELPDG GWGDHIQLLQ++E+WD+  YDPRWC+D++LQVR M F+KDVR
Sbjct: 477  SKDMEGKRKR-QELPDGSGWGDHIQLLQIFESWDRTGYDPRWCSDHELQVRGMKFSKDVR 535

Query: 738  KQLSQIIQKIAKGPCDVESGIRQKRSDKDYRNLRRALCKGYGNQLAERMLRHNGYKTIGY 559
             QLSQIIQKIAKG  DV++  ++++SD DYR LRRALC GYGNQLAERML HNGY T+GY
Sbjct: 536  NQLSQIIQKIAKGSTDVQAK-KERKSDPDYRKLRRALCVGYGNQLAERMLHHNGYHTVGY 594

Query: 558  RSQLVQVHPSSVLESDENGCLPDYVVYHELINISRPFMRNVCAVEMAWAMPILRKLEKMD 379
            R+QLVQVHP SVLE DE G LP YVVYHELIN +RPFMRNV AV+ +W  PIL+KLE++D
Sbjct: 595  RAQLVQVHPFSVLEGDEYGKLPVYVVYHELINTTRPFMRNVSAVDQSWVKPILKKLERLD 654

Query: 378  INKLRGGSYDSKVENKSVENEAIQKQNPEETTKKPAEDVDSKIQAARERYLARKAKK 208
            +NKL GGS  SK + + +E++  Q  +P++       DVDSKIQAARERYLARK KK
Sbjct: 655  MNKLSGGSSGSK-DPEPLEDK--QVSSPKKAMDVKQSDVDSKIQAARERYLARKGKK 708


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