BLASTX nr result

ID: Dioscorea21_contig00016456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016456
         (1319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263053.2| PREDICTED: 60S ribosomal protein L3 [Vitis v...   697   0.0  
emb|CAN83050.1| hypothetical protein VITISV_042376 [Vitis vinifera]   696   0.0  
ref|XP_003536417.1| PREDICTED: 60S ribosomal protein L3-like [Gl...   692   0.0  
ref|XP_003556156.1| PREDICTED: 60S ribosomal protein L3-like [Gl...   691   0.0  
emb|CBI18223.3| unnamed protein product [Vitis vinifera]              691   0.0  

>ref|XP_002263053.2| PREDICTED: 60S ribosomal protein L3 [Vitis vinifera]
            gi|297739519|emb|CBI29701.3| unnamed protein product
            [Vitis vinifera]
          Length = 389

 Score =  697 bits (1799), Expect = 0.0
 Identities = 331/389 (85%), Positives = 356/389 (91%)
 Frame = +1

Query: 64   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPRKAPRLTAFMGYKAGMTHIVREV 243
            MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDP    RLTAF+GYKAGMTHIVREV
Sbjct: 1    MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTNPCRLTAFLGYKAGMTHIVREV 60

Query: 244  DKPGSKLHKKETCEAVTVIEVPPMIVVGVVGYVKTPRGLRSLNTVWAQHLSEEVKRRFYK 423
            +KPGSKLHKKETCEAVT+IE PPM+VVGVVGY+KTPRGLRSLNTVWAQHLSEEVKRRFYK
Sbjct: 61   EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYLKTPRGLRSLNTVWAQHLSEEVKRRFYK 120

Query: 424  NWCXXXXXXXXXXXXXXENEDGKKDIQAQLEKMKKYASVVRVLAHTQIXXXXXXXXXXAH 603
            NWC              E+EDGKKDIQAQLEKMKKY +V+RVLAHTQI          AH
Sbjct: 121  NWCKSKKKAFTKYSKKYESEDGKKDIQAQLEKMKKYCNVIRVLAHTQIRKMKGLKQKKAH 180

Query: 604  LMEIQVNGGDIAQKVDYAYSFFEKQIPVDAVFQKDEMIDVIGVTKGKGYEGVVTRWGVTR 783
            LMEIQVNGGD+A+KVDYAY FFEKQIP+DA+FQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181  LMEIQVNGGDVAKKVDYAYGFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 784  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKAGEESHSAVT 963
            LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK+GK G+ESHSA+T
Sbjct: 241  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKVGKTGQESHSAMT 300

Query: 964  DFDRTEKGVTPMGGFPHYGVVKDDYIMIKGCCMGPKKRVITLRQSLLKQTSRVAMEEIKL 1143
            +FDRTEK +TPMGGFPHYGVVKDDY++IKGCC+GPKKRV+TLRQSLLKQTSRVAMEEIKL
Sbjct: 301  EFDRTEKDITPMGGFPHYGVVKDDYLLIKGCCVGPKKRVVTLRQSLLKQTSRVAMEEIKL 360

Query: 1144 KFVDTSSKFGHGRFQTTQEKAKFYGRLKA 1230
            KF+DTSSKFGHGRFQTTQEKAKF+GRLKA
Sbjct: 361  KFIDTSSKFGHGRFQTTQEKAKFFGRLKA 389


>emb|CAN83050.1| hypothetical protein VITISV_042376 [Vitis vinifera]
          Length = 389

 Score =  696 bits (1796), Expect = 0.0
 Identities = 331/389 (85%), Positives = 356/389 (91%)
 Frame = +1

Query: 64   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPRKAPRLTAFMGYKAGMTHIVREV 243
            MSHRKFEHPRHGSLGFL RKRA+RHRGKVKAFPKDDP K  RLTAF+GYKAGMTHIVREV
Sbjct: 1    MSHRKFEHPRHGSLGFLXRKRAARHRGKVKAFPKDDPTKPCRLTAFLGYKAGMTHIVREV 60

Query: 244  DKPGSKLHKKETCEAVTVIEVPPMIVVGVVGYVKTPRGLRSLNTVWAQHLSEEVKRRFYK 423
            +KPGSKLHKKETCEAVT+IE PPM+VVGVVGY+KTPRGLRSLNTVWAQHLSEEVKRRFYK
Sbjct: 61   EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYLKTPRGLRSLNTVWAQHLSEEVKRRFYK 120

Query: 424  NWCXXXXXXXXXXXXXXENEDGKKDIQAQLEKMKKYASVVRVLAHTQIXXXXXXXXXXAH 603
            NWC              E+EDGKKDIQAQLEKMKKY +V+RVLAHTQI          AH
Sbjct: 121  NWCKSKKKAFTKYSKKYESEDGKKDIQAQLEKMKKYCNVIRVLAHTQIRKMKGLKQKKAH 180

Query: 604  LMEIQVNGGDIAQKVDYAYSFFEKQIPVDAVFQKDEMIDVIGVTKGKGYEGVVTRWGVTR 783
            LMEIQVNGGD+A+KVDYAY FFEKQIP+DA+FQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181  LMEIQVNGGDVAKKVDYAYGFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 784  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKAGEESHSAVT 963
            LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK+GK G+ESHSA+T
Sbjct: 241  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKVGKTGQESHSAMT 300

Query: 964  DFDRTEKGVTPMGGFPHYGVVKDDYIMIKGCCMGPKKRVITLRQSLLKQTSRVAMEEIKL 1143
            +FDRTEK +TPMGGFPHYGVVKDDY++IKGCC+GPKKRV+TLRQSLLKQTSRVAMEEIKL
Sbjct: 301  EFDRTEKDITPMGGFPHYGVVKDDYLLIKGCCVGPKKRVVTLRQSLLKQTSRVAMEEIKL 360

Query: 1144 KFVDTSSKFGHGRFQTTQEKAKFYGRLKA 1230
            KF+DTSSKFGHGRFQTTQEKAKF+GRLKA
Sbjct: 361  KFIDTSSKFGHGRFQTTQEKAKFFGRLKA 389


>ref|XP_003536417.1| PREDICTED: 60S ribosomal protein L3-like [Glycine max]
          Length = 389

 Score =  692 bits (1785), Expect = 0.0
 Identities = 326/389 (83%), Positives = 358/389 (92%)
 Frame = +1

Query: 64   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPRKAPRLTAFMGYKAGMTHIVREV 243
            MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDP KAP+LTAF+GYKAGMTHIVREV
Sbjct: 1    MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKAPKLTAFLGYKAGMTHIVREV 60

Query: 244  DKPGSKLHKKETCEAVTVIEVPPMIVVGVVGYVKTPRGLRSLNTVWAQHLSEEVKRRFYK 423
            +KPGSKLHKKETCE VT+IE PPM++VGVVGYVKTPRGLR+LNTVWAQHLSEE+KRRFYK
Sbjct: 61   EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLNTVWAQHLSEELKRRFYK 120

Query: 424  NWCXXXXXXXXXXXXXXENEDGKKDIQAQLEKMKKYASVVRVLAHTQIXXXXXXXXXXAH 603
            NWC              E E+GKK+I+AQLEK+KKYA+VVRVLAHTQI          AH
Sbjct: 121  NWCKSKKKAFTKYSKQYETEEGKKNIEAQLEKLKKYATVVRVLAHTQIRKMKGLKQKKAH 180

Query: 604  LMEIQVNGGDIAQKVDYAYSFFEKQIPVDAVFQKDEMIDVIGVTKGKGYEGVVTRWGVTR 783
            +MEIQVNGG IAQKVD+AYSFFEKQ+P+DAVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181  IMEIQVNGGSIAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 784  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKAGEESHSAVT 963
            LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKK+YK+GKAG+ESHSA+T
Sbjct: 241  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKLGKAGDESHSALT 300

Query: 964  DFDRTEKGVTPMGGFPHYGVVKDDYIMIKGCCMGPKKRVITLRQSLLKQTSRVAMEEIKL 1143
            +FDRTEK +TPMGGFPHYGVVKDD+IM+KGCC+GPKKRVITLRQSLLKQTSRVA+EEIKL
Sbjct: 301  EFDRTEKDITPMGGFPHYGVVKDDFIMVKGCCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 1144 KFVDTSSKFGHGRFQTTQEKAKFYGRLKA 1230
            KF+DTSSKFGHGRFQTTQEK KF+GRLKA
Sbjct: 361  KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 389


>ref|XP_003556156.1| PREDICTED: 60S ribosomal protein L3-like [Glycine max]
          Length = 389

 Score =  691 bits (1784), Expect = 0.0
 Identities = 326/389 (83%), Positives = 358/389 (92%)
 Frame = +1

Query: 64   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPRKAPRLTAFMGYKAGMTHIVREV 243
            MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDP KAP+LTAF+GYKAGMTHIVREV
Sbjct: 1    MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKAPKLTAFLGYKAGMTHIVREV 60

Query: 244  DKPGSKLHKKETCEAVTVIEVPPMIVVGVVGYVKTPRGLRSLNTVWAQHLSEEVKRRFYK 423
            +KPGSKLHKKETCE VT+IE PPM++VGVVGYVKTPRGLR+LNTVWAQHLSEE+KRRFYK
Sbjct: 61   EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLNTVWAQHLSEELKRRFYK 120

Query: 424  NWCXXXXXXXXXXXXXXENEDGKKDIQAQLEKMKKYASVVRVLAHTQIXXXXXXXXXXAH 603
            NWC              E E+GKK+I+AQLEK+KKYA+VVRVLAHTQI          AH
Sbjct: 121  NWCKSKKKAFTKYSKQYETEEGKKNIEAQLEKLKKYATVVRVLAHTQIRKMKGLKQKKAH 180

Query: 604  LMEIQVNGGDIAQKVDYAYSFFEKQIPVDAVFQKDEMIDVIGVTKGKGYEGVVTRWGVTR 783
            +MEIQVNGG IAQKVD+AYSFFEKQ+P+DAVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181  IMEIQVNGGTIAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 784  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKAGEESHSAVT 963
            LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKK+YK+GKAG+ESHSA+T
Sbjct: 241  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKLGKAGDESHSALT 300

Query: 964  DFDRTEKGVTPMGGFPHYGVVKDDYIMIKGCCMGPKKRVITLRQSLLKQTSRVAMEEIKL 1143
            +FDRTEK +TP+GGFPHYGVVKDDYIM+KGCC+GPKKRVITLRQSLLKQTSRVA+EEIKL
Sbjct: 301  EFDRTEKDITPIGGFPHYGVVKDDYIMVKGCCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 1144 KFVDTSSKFGHGRFQTTQEKAKFYGRLKA 1230
            KF+DTSSKFGHGRFQTTQEK KF+GRLKA
Sbjct: 361  KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 389


>emb|CBI18223.3| unnamed protein product [Vitis vinifera]
          Length = 449

 Score =  691 bits (1784), Expect = 0.0
 Identities = 329/392 (83%), Positives = 354/392 (90%)
 Frame = +1

Query: 55   QRNMSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPRKAPRLTAFMGYKAGMTHIV 234
            +R MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDP K  RLTAF+GYKAGMTHIV
Sbjct: 58   RRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIV 117

Query: 235  REVDKPGSKLHKKETCEAVTVIEVPPMIVVGVVGYVKTPRGLRSLNTVWAQHLSEEVKRR 414
            REV+KPGSKLHKKETCEAVT++E PPM++VGVV YVKTPRGLRSLNTVWAQHLSEEVKRR
Sbjct: 118  REVEKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEEVKRR 177

Query: 415  FYKNWCXXXXXXXXXXXXXXENEDGKKDIQAQLEKMKKYASVVRVLAHTQIXXXXXXXXX 594
            FYKNWC              E E+GKK IQAQLEKMKKYASV+RVLAHTQI         
Sbjct: 178  FYKNWCKSKKKAFTKYSKQYETEEGKKSIQAQLEKMKKYASVIRVLAHTQIRKMKGLKQK 237

Query: 595  XAHLMEIQVNGGDIAQKVDYAYSFFEKQIPVDAVFQKDEMIDVIGVTKGKGYEGVVTRWG 774
             AHLMEIQVNGG IAQKVDYAY FFEKQ+PVDA+FQKDEMID+IGVTKGKGYEGVVTRWG
Sbjct: 238  KAHLMEIQVNGGTIAQKVDYAYGFFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWG 297

Query: 775  VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKAGEESHS 954
            VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK+GK  +ESH+
Sbjct: 298  VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKIEQESHT 357

Query: 955  AVTDFDRTEKGVTPMGGFPHYGVVKDDYIMIKGCCMGPKKRVITLRQSLLKQTSRVAMEE 1134
            A+T+FDRTEK +TPMGGFPHYGVVKDDY+MIKGCC+GPKKRV+TLRQSLLKQTSRVA+EE
Sbjct: 358  ALTEFDRTEKDITPMGGFPHYGVVKDDYVMIKGCCVGPKKRVVTLRQSLLKQTSRVALEE 417

Query: 1135 IKLKFVDTSSKFGHGRFQTTQEKAKFYGRLKA 1230
            IKLKF+DTSSKFGHGRFQTTQEK KFYGR+KA
Sbjct: 418  IKLKFIDTSSKFGHGRFQTTQEKQKFYGRMKA 449


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