BLASTX nr result

ID: Dioscorea21_contig00016452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016452
         (781 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002437680.1| hypothetical protein SORBIDRAFT_10g000660 [S...   407   e-111
ref|XP_003525377.1| PREDICTED: probable polygalacturonase-like [...   403   e-110
ref|XP_002299511.1| predicted protein [Populus trichocarpa] gi|2...   403   e-110
gb|AAP33475.1| polygalacturonase-like protein [Fragaria x ananassa]   403   e-110
gb|AFK37962.1| unknown [Lotus japonicus]                              399   e-109

>ref|XP_002437680.1| hypothetical protein SORBIDRAFT_10g000660 [Sorghum bicolor]
           gi|241915903|gb|EER89047.1| hypothetical protein
           SORBIDRAFT_10g000660 [Sorghum bicolor]
          Length = 495

 Score =  407 bits (1045), Expect = e-111
 Identities = 196/259 (75%), Positives = 221/259 (85%), Gaps = 2/259 (0%)
 Frame = +3

Query: 6   ISNLTFVNSTSWHIHPVYSSYIVVSGITILAPIISPNTDGVNPDSCSHVRIEDCYIVSGD 185
           ISNLT +NS +W+IHPVYSS IVV GITILAP  SPNTDG+NPDSCSHVRIEDCYIVSGD
Sbjct: 212 ISNLTLLNSPAWNIHPVYSSNIVVQGITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGD 271

Query: 186 DCVAIKSGWDEYGIAFGMPSQHIIIRRLTCISPTSAVIALGSEMSGGIQDVRAEDITAIN 365
           DCVAIKSGWDEYGI++GMPSQHI+IRRLTC+SPTSAVIALGSEMSGGIQDVRAEDITAIN
Sbjct: 272 DCVAIKSGWDEYGISYGMPSQHIVIRRLTCVSPTSAVIALGSEMSGGIQDVRAEDITAIN 331

Query: 366 SESGVRIKTAPGRGGFVKDIFVRRMNLYTMKWVFWMTGNYGQHPDDKYDPNAMPFVHGIS 545
           SESGVRIKTA GRG +VKD+FVRRM L TMKWVFWMTGNY  HPDDKYDPNA+P V  IS
Sbjct: 332 SESGVRIKTAVGRGAYVKDVFVRRMTLTTMKWVFWMTGNYKSHPDDKYDPNAIPVVDNIS 391

Query: 546 YSDVIAENV-TMAGNLLGIERAPFTGICISNVTADMAKSKKQPWNCSDIYGITSSVSPTP 722
           Y DV+A  V   A  L GI+ APF GIC++NVTAD++KS+K PW C+D+ G++ +VSP P
Sbjct: 392 YQDVVATGVYKEAARLEGIQGAPFKGICVANVTADLSKSRKYPWTCADVEGVSVNVSPAP 451

Query: 723 CALLPDQGS-NAPCPFPTD 776
           C   P QG+ +  CPFPTD
Sbjct: 452 CQ--PLQGAHDGACPFPTD 468


>ref|XP_003525377.1| PREDICTED: probable polygalacturonase-like [Glycine max]
          Length = 469

 Score =  403 bits (1036), Expect = e-110
 Identities = 190/260 (73%), Positives = 217/260 (83%), Gaps = 3/260 (1%)
 Frame = +3

Query: 6   ISNLTFVNSTSWHIHPVYSSYIVVSGITILAPIISPNTDGVNPDSCSHVRIEDCYIVSGD 185
           ISNLT VNS SW++HP+YSS +VV GITILAP+ SPNTDG+NPDSC++ RIEDCYIVSGD
Sbjct: 192 ISNLTLVNSPSWNVHPIYSSNLVVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 251

Query: 186 DCVAIKSGWDEYGIAFGMPSQHIIIRRLTCISPTSAVIALGSEMSGGIQDVRAEDITAIN 365
           DCVA+KSGWDEYGIA+GMP++ ++IRRLTCISP SAVIALGSEMSGGIQDVRAEDI AIN
Sbjct: 252 DCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPFSAVIALGSEMSGGIQDVRAEDIVAIN 311

Query: 366 SESGVRIKTAPGRGGFVKDIFVRRMNLYTMKWVFWMTGNYGQHPDDKYDPNAMPFVHGIS 545
           SESGVRIKTA GRGG+VKDIFVRRM + TMKW FWMTGNYG H DD YDPNA+P +  I+
Sbjct: 312 SESGVRIKTAVGRGGYVKDIFVRRMTMKTMKWAFWMTGNYGSHADDNYDPNALPVIQNIN 371

Query: 546 YSDVIAENVTMAGNLLGIERAPFTGICISNVTADMA-KSKKQPWNCSDIYGITSSVSPTP 722
           Y D++AENVTMA  L GI   PFTGICISNVT  +A K+KK PW C+DI GI+S V+P P
Sbjct: 372 YRDMVAENVTMAARLEGISGDPFTGICISNVTIQLAKKAKKVPWTCTDIAGISSDVTPAP 431

Query: 723 CALLPDQGSN--APCPFPTD 776
           C LLPDQG      C FP +
Sbjct: 432 CGLLPDQGEEKIGACTFPEE 451


>ref|XP_002299511.1| predicted protein [Populus trichocarpa] gi|222846769|gb|EEE84316.1|
           predicted protein [Populus trichocarpa]
          Length = 481

 Score =  403 bits (1035), Expect = e-110
 Identities = 191/260 (73%), Positives = 220/260 (84%), Gaps = 3/260 (1%)
 Frame = +3

Query: 6   ISNLTFVNSTSWHIHPVYSSYIVVSGITILAPIISPNTDGVNPDSCSHVRIEDCYIVSGD 185
           ISNLT +NS SW++HPVY S +VV G+TILAP+ SPNTDG+NPDSC++ RIEDCYIVSGD
Sbjct: 202 ISNLTLINSPSWNVHPVYCSNVVVQGLTILAPVRSPNTDGINPDSCTNTRIEDCYIVSGD 261

Query: 186 DCVAIKSGWDEYGIAFGMPSQHIIIRRLTCISPTSAVIALGSEMSGGIQDVRAEDITAIN 365
           DCVA+KSGWDEYGI+FGMP++ ++IRRLTCISPTSAVIALGSEMSGGI+DVRAEDITAI+
Sbjct: 262 DCVAVKSGWDEYGISFGMPTKQLVIRRLTCISPTSAVIALGSEMSGGIEDVRAEDITAID 321

Query: 366 SESGVRIKTAPGRGGFVKDIFVRRMNLYTMKWVFWMTGNYGQHPDDKYDPNAMPFVHGIS 545
           SESGVRIKTA GRGG+VKDI+VR M L TMKWVFWMTGNYG HPD+ YDPNA+P +  I+
Sbjct: 322 SESGVRIKTAVGRGGYVKDIYVRGMTLKTMKWVFWMTGNYGSHPDNNYDPNAIPVIQNIN 381

Query: 546 YSDVIAENVTMAGNLLGIERAPFTGICISNVTADMAK-SKKQPWNCSDIYGITSSVSPTP 722
           Y DV+AENVTMA  L GI   PFTGICISNVT  +A+ SKK  WNC+D+ GITS V+P P
Sbjct: 382 YRDVVAENVTMAAKLEGIAGDPFTGICISNVTIGLAQNSKKLQWNCTDVAGITSEVNPKP 441

Query: 723 CALLPDQGSN--APCPFPTD 776
           CALLPDQG      C FP D
Sbjct: 442 CALLPDQGPGKIGGCNFPED 461


>gb|AAP33475.1| polygalacturonase-like protein [Fragaria x ananassa]
          Length = 474

 Score =  403 bits (1035), Expect = e-110
 Identities = 190/261 (72%), Positives = 220/261 (84%), Gaps = 3/261 (1%)
 Frame = +3

Query: 6   ISNLTFVNSTSWHIHPVYSSYIVVSGITILAPIISPNTDGVNPDSCSHVRIEDCYIVSGD 185
           ISNLT +NS SW++HPVYSS I+V GITI+API SPNTDG+NPDSC++ +IEDCYIVSGD
Sbjct: 197 ISNLTLLNSPSWNVHPVYSSNIIVQGITIIAPISSPNTDGINPDSCTNTKIEDCYIVSGD 256

Query: 186 DCVAIKSGWDEYGIAFGMPSQHIIIRRLTCISPTSAVIALGSEMSGGIQDVRAEDITAIN 365
           DCVA+KSGWDEYGI+FGMP++ ++IRRLTCISP SA IALGSEMSGGIQDVRAEDI AIN
Sbjct: 257 DCVAVKSGWDEYGISFGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIVAIN 316

Query: 366 SESGVRIKTAPGRGGFVKDIFVRRMNLYTMKWVFWMTGNYGQHPDDKYDPNAMPFVHGIS 545
           +ES VRIKTA GRG +VKDI+VRRM L+TMKW FWMTGNYG H D  YD NA P + GI+
Sbjct: 317 TESAVRIKTAVGRGAYVKDIYVRRMTLHTMKWAFWMTGNYGSHADGNYDKNAFPEITGIN 376

Query: 546 YSDVIAENVTMAGNLLGIERAPFTGICISNVTADMA-KSKKQPWNCSDIYGITSSVSPTP 722
           Y DV+AENVTMA  L GI   PFTGIC+SNVT  +A K+KKQPW C+DI GITS V+PTP
Sbjct: 377 YRDVVAENVTMAARLEGIADHPFTGICMSNVTIGLAKKAKKQPWTCTDIQGITSGVTPTP 436

Query: 723 CALLPDQGSNAP--CPFPTDE 779
           C LLPDQG++ P  C FPTD+
Sbjct: 437 CGLLPDQGTDKPGGCDFPTDD 457


>gb|AFK37962.1| unknown [Lotus japonicus]
          Length = 469

 Score =  399 bits (1024), Expect = e-109
 Identities = 186/260 (71%), Positives = 219/260 (84%), Gaps = 3/260 (1%)
 Frame = +3

Query: 6   ISNLTFVNSTSWHIHPVYSSYIVVSGITILAPIISPNTDGVNPDSCSHVRIEDCYIVSGD 185
           ISNLT VNS SW+IHPVY S ++V GITILAP+ SPNTDG+NPDSC++ RIEDCYIVSGD
Sbjct: 192 ISNLTLVNSPSWNIHPVYCSNVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 251

Query: 186 DCVAIKSGWDEYGIAFGMPSQHIIIRRLTCISPTSAVIALGSEMSGGIQDVRAEDITAIN 365
           DCVA+KSGWDEYGI++GMP++H++IRRLTCISPTSAVIALGSEMSGGI+DVRAEDI AIN
Sbjct: 252 DCVAVKSGWDEYGISYGMPTKHLVIRRLTCISPTSAVIALGSEMSGGIEDVRAEDILAIN 311

Query: 366 SESGVRIKTAPGRGGFVKDIFVRRMNLYTMKWVFWMTGNYGQHPDDKYDPNAMPFVHGIS 545
           SESGVRIKTA GRGG+V+DI+VRRM + TMKWVFWMTG+YG H D+ YDPNA+P +  I+
Sbjct: 312 SESGVRIKTAVGRGGYVRDIYVRRMTMKTMKWVFWMTGDYGSHADNNYDPNAIPVIENIN 371

Query: 546 YSDVIAENVTMAGNLLGIERAPFTGICISNVTADMA-KSKKQPWNCSDIYGITSSVSPTP 722
           Y D++AENVTMA  L GI  APFTGICISNVT ++A K+KK PW C+D+ GI+S V+P P
Sbjct: 372 YRDMVAENVTMAARLEGISGAPFTGICISNVTIELAKKAKKVPWTCTDVSGISSGVTPEP 431

Query: 723 CALLPDQGSN--APCPFPTD 776
           C LLP Q       C FP D
Sbjct: 432 CELLPGQAEEKFGACSFPED 451


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