BLASTX nr result

ID: Dioscorea21_contig00016440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016440
         (1178 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gy...   151   4e-34
ref|NP_001176105.1| Os10g0357350 [Oryza sativa Japonica Group] g...   148   2e-33
gb|EEC80541.1| hypothetical protein OsI_22839 [Oryza sativa Indi...   138   3e-30
gb|ADN33767.1| gag protease polyprotein [Cucumis melo subsp. melo]    132   2e-28
gb|ADN33714.1| ty3-gypsy retrotransposon protein [Cucumis melo s...   132   2e-28

>gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gypsy type [Oryza sativa]
            gi|21327374|gb|AAM48279.1|AC122148_32 Putative 22 kDa
            kafirin cluster; Ty3-Gypsy type [Oryza sativa Japonica
            Group] gi|31431495|gb|AAP53268.1| retrotransposon
            protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1230

 Score =  151 bits (381), Expect = 4e-34
 Identities = 83/214 (38%), Positives = 123/214 (57%)
 Frame = -3

Query: 1152 REMMLMMRNQRQQHTSGGSQDLLTEFGRYAPPPFKGTTDPTVVEYWVRQIEKTFQAMQSP 973
            R+M ++ R  +      G    L EF +  PP F GT +P   E W+  +EK+F+AM   
Sbjct: 53   RQMEILERITKSDANRNG----LGEFQKLKPPTFSGTANPLEAEEWIVAMEKSFEAMGCT 108

Query: 972  DEEKVRLATYMLRDSAAQWFENELHLKGDEAFKTWEQFKEAFYAKYFPLSRRAQMERQFL 793
            D+EK+  ATYML+ SA +W++       +  F TWE FKEAFY KYFP S +   E++FL
Sbjct: 109  DKEKIIYATYMLQSSAFEWWDAHKKSYSERIFITWELFKEAFYKKYFPESVKRMKEKEFL 168

Query: 792  NLKQGSMTIEEYEAEFDRLSMFATSLVEDDNSKSRRFAEGLKSHIRRAIVPFLRLPYAEV 613
             LKQG+ ++ EYE EF RL+ FA   V+ D SK+RRF  GL+  ++R +  F    + EV
Sbjct: 169  ELKQGNKSVAEYEIEFSRLARFAPEFVQTDGSKARRFESGLRQPLKRRVEAFELTIFREV 228

Query: 612  AVIAKDLEITWQETQDLDMREQQQNWGPNPRKSQ 511
               A+ LE  + E Q ++  + Q+ +  N  ++Q
Sbjct: 229  VSKAQLLEKGYHE-QRIEHGQPQKKFKTNNPQNQ 261


>ref|NP_001176105.1| Os10g0357350 [Oryza sativa Japonica Group]
            gi|255679330|dbj|BAH94833.1| Os10g0357350 [Oryza sativa
            Japonica Group]
          Length = 443

 Score =  148 bits (374), Expect = 2e-33
 Identities = 78/188 (41%), Positives = 110/188 (58%)
 Frame = -3

Query: 1152 REMMLMMRNQRQQHTSGGSQDLLTEFGRYAPPPFKGTTDPTVVEYWVRQIEKTFQAMQSP 973
            R+M ++ R  +      G    L EF +  PP F GT +P   E W+  +EK+F+AM   
Sbjct: 141  RQMEILERITKSDANRNG----LGEFQKLKPPTFSGTANPLEAEEWIVAMEKSFEAMGCT 196

Query: 972  DEEKVRLATYMLRDSAAQWFENELHLKGDEAFKTWEQFKEAFYAKYFPLSRRAQMERQFL 793
            D+EK+  ATYML+ SA +W++       +  F TWE FKEAFY KYFP S +   E++FL
Sbjct: 197  DKEKIIYATYMLQSSAFEWWDAHKKSYSERIFITWELFKEAFYKKYFPESVKRMKEKEFL 256

Query: 792  NLKQGSMTIEEYEAEFDRLSMFATSLVEDDNSKSRRFAEGLKSHIRRAIVPFLRLPYAEV 613
             LKQG+ ++ EYE EF RL+ FA   V+ D SK+RRF  GL+  ++R +  F    + EV
Sbjct: 257  ELKQGNKSVAEYEIEFSRLARFAPEFVQTDGSKARRFESGLRQPLKRRVEAFELTIFREV 316

Query: 612  AVIAKDLE 589
               A+ LE
Sbjct: 317  VSKAQLLE 324


>gb|EEC80541.1| hypothetical protein OsI_22839 [Oryza sativa Indica Group]
          Length = 285

 Score =  138 bits (347), Expect = 3e-30
 Identities = 76/199 (38%), Positives = 115/199 (57%)
 Frame = -3

Query: 1107 SGGSQDLLTEFGRYAPPPFKGTTDPTVVEYWVRQIEKTFQAMQSPDEEKVRLATYMLRDS 928
            S  +++ L EF +  PP F GT +P   E W+  +EK F+AM   D+EK+  ATYML+ S
Sbjct: 46   SDANRNGLGEFQKLKPPTFSGTANPPKAEDWIVAMEKAFEAMGYTDKEKIIYATYMLQSS 105

Query: 927  AAQWFENELHLKGDEAFKTWEQFKEAFYAKYFPLSRRAQMERQFLNLKQGSMTIEEYEAE 748
            A +W++       +    TWE FKEAF  KYFP S +   E++FL LKQ + ++ EYE E
Sbjct: 106  AFEWWDAHKKSYSERISITWELFKEAFCKKYFPESVKRMKEKEFLELKQCNKSVAEYEIE 165

Query: 747  FDRLSMFATSLVEDDNSKSRRFAEGLKSHIRRAIVPFLRLPYAEVAVIAKDLEITWQETQ 568
            F RL+  A   V+ D SK+RRF  GL+  ++R +  F    + EV   A+ LE  + E Q
Sbjct: 166  FSRLARLAPEFVQMDGSKARRFESGLRQPLKRCVEAFELTIFREVVSKAQLLEEGYHE-Q 224

Query: 567  DLDMREQQQNWGPNPRKSQ 511
             ++  + Q+ +  N +++Q
Sbjct: 225  RIEHGQPQKKFKTNNQQNQ 243


>gb|ADN33767.1| gag protease polyprotein [Cucumis melo subsp. melo]
          Length = 871

 Score =  132 bits (331), Expect = 2e-28
 Identities = 66/169 (39%), Positives = 104/169 (61%), Gaps = 2/169 (1%)
 Frame = -3

Query: 1086 LTEFGRYAPPPFKGTT-DPTVVEYWVRQIEKTFQAMQSPDEEKVRLATYMLRDSAAQWFE 910
            L +F +Y P  F G+  DPT  + W+  +E  F+ M+ P+++KV+ A +ML D    W+E
Sbjct: 332  LRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWE 391

Query: 909  N-ELHLKGDEAFKTWEQFKEAFYAKYFPLSRRAQMERQFLNLKQGSMTIEEYEAEFDRLS 733
              E  L GD +  TW+QFKE+FYAK+F  S R    ++FLNL+QG MT+E+Y+AEFD LS
Sbjct: 392  TTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLS 451

Query: 732  MFATSLVEDDNSKSRRFAEGLKSHIRRAIVPFLRLPYAEVAVIAKDLEI 586
             FA  ++  + +++ +F  GL+  I+  +  F    +A+   +A DL +
Sbjct: 452  RFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSL 500


>gb|ADN33714.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 285

 Score =  132 bits (331), Expect = 2e-28
 Identities = 70/177 (39%), Positives = 108/177 (61%), Gaps = 2/177 (1%)
 Frame = -3

Query: 1086 LTEFGRYAPPPFKGTT-DPTVVEYWVRQIEKTFQAMQSPDEEKVRLATYMLRDSAAQWFE 910
            L +F  Y P  F G+  DP   + W+  +E  F+ M+ PD++KV+ A ++LR+ AA W++
Sbjct: 84   LRDFRIYDPQTFNGSLEDPISTKLWLSSVETIFRFMRCPDDQKVQCAVFLLRERAAIWWQ 143

Query: 909  N-ELHLKGDEAFKTWEQFKEAFYAKYFPLSRRAQMERQFLNLKQGSMTIEEYEAEFDRLS 733
            + E  L G+    TW+QFKE+FYAK+ P S R    ++F+NLKQG MT+EEY+ EFD LS
Sbjct: 144  SVERMLGGNVNQITWDQFKESFYAKFLPSSLRDAKRQEFINLKQGQMTVEEYDYEFDMLS 203

Query: 732  MFATSLVEDDNSKSRRFAEGLKSHIRRAIVPFLRLPYAEVAVIAKDLEITWQETQDL 562
            +FA  LVE + ++++ F  GL+  ++  +  F      E   +A DL +  Q+  DL
Sbjct: 204  LFAPELVETEAARAKMFVWGLRKDLQGFVRAFKPATQTEALYLALDLSV--QKDDDL 258


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