BLASTX nr result

ID: Dioscorea21_contig00016422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016422
         (208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330184.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_002282882.2| PREDICTED: syntaxin-43-like [Vitis vinifera]...    57   2e-06
ref|XP_004158729.1| PREDICTED: syntaxin-43-like [Cucumis sativus]      56   3e-06
ref|NP_001239871.1| uncharacterized protein LOC100803629 [Glycin...    55   6e-06
ref|XP_004144767.1| PREDICTED: syntaxin-43-like [Cucumis sativus]      55   8e-06

>ref|XP_002330184.1| predicted protein [Populus trichocarpa] gi|222871640|gb|EEF08771.1|
           predicted protein [Populus trichocarpa]
          Length = 324

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/29 (89%), Positives = 29/29 (100%)
 Frame = +3

Query: 3   KGGMVMCATVLVIMCFVMLVLLVLKTILF 89
           +GGMVMCATVLVIMCF+MLVLLVLKTI+F
Sbjct: 296 RGGMVMCATVLVIMCFIMLVLLVLKTIVF 324


>ref|XP_002282882.2| PREDICTED: syntaxin-43-like [Vitis vinifera]
           gi|296089745|emb|CBI39564.3| unnamed protein product
           [Vitis vinifera]
          Length = 327

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = +3

Query: 3   KGGMVMCATVLVIMCFVMLVLLVLKTIL 86
           KGGMVMCATVLVIMCFVMLVLL+LKTIL
Sbjct: 299 KGGMVMCATVLVIMCFVMLVLLILKTIL 326


>ref|XP_004158729.1| PREDICTED: syntaxin-43-like [Cucumis sativus]
          Length = 329

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/29 (89%), Positives = 29/29 (100%)
 Frame = +3

Query: 3   KGGMVMCATVLVIMCFVMLVLLVLKTILF 89
           +GGMVMCA+VLVIMCFVMLVLL+LKTILF
Sbjct: 301 QGGMVMCASVLVIMCFVMLVLLILKTILF 329


>ref|NP_001239871.1| uncharacterized protein LOC100803629 [Glycine max]
           gi|255637864|gb|ACU19251.1| unknown [Glycine max]
          Length = 324

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = +3

Query: 3   KGGMVMCATVLVIMCFVMLVLLVLKTILF 89
           KGGMVMCAT LVIMCFVMLVLL+LK ILF
Sbjct: 296 KGGMVMCATTLVIMCFVMLVLLILKEILF 324


>ref|XP_004144767.1| PREDICTED: syntaxin-43-like [Cucumis sativus]
          Length = 329

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/29 (86%), Positives = 29/29 (100%)
 Frame = +3

Query: 3   KGGMVMCATVLVIMCFVMLVLLVLKTILF 89
           +GGMVMCA++LVIMCFVMLVLL+LKTILF
Sbjct: 301 QGGMVMCASMLVIMCFVMLVLLILKTILF 329


Top